Maylandia zebra (zebra mbuna): 101478819
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Entry
101478819 CDS
T02814
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-3 isoform X1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
101478819
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mze04040
]
101478819
Ion channels [BR:
mze04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
101478819
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
101478819
NCBI-ProteinID:
XP_012778583
LinkDB
All DBs
Position
LG1:4096236..4134030
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AA seq
1324 aa
AA seq
DB search
MLSWVVKVVPQPPEPKKSEEQKDAAPPPAPAPPPAAAPPPVTEKKVKFQDEVKSETPKAE
KPMQEPQTGAENGPAAGSQSGMLTWISGALPQPAVSPKMSRANSTAKEEVEPASKPEDDK
GMIAWISQGLEKVVPQPELKSKEPPTAEQPAEVRQAAPAPAAEPPVTVVEVKLDRDDKTE
NKPPSMIDWIKQGIEKVVPQPEIHVRSKTEAEAPAQAEAPPPAPPPVPKPAPETEKSTKE
AEEPPNMMGWIVNGIGRMLPQPVQKSDAGNDEVQTISIIQKNTDLVLEDIEQEEVKETKP
EVKEEPQLEKKEDVKPSKKETGDAESQVDELSPLIDSIKKEAGEAVLAHMEERLQQERLE
AARVAEEMARKAAEEAVRQLEVEHSAKIVIETLPESNEQLPNILEEENEDDPELQNLQED
SEDSTENQSPEENKVTEEDKIKTTVEEETKSDQADLKRCIVDVCPAEDEIKATTQVEKVE
PAPDKTHKPPTPPTESEAPEEATPSTDAEPVSQQPEPLPPETPPTTTDQTSTAEAEEGGC
GENCSKRLAEASELKVEAMDVMEGKGLNIPQIITTPEPEPNNLTAPELSVAGDVSADEDD
PELLRVGLKVWSTQGDHLSADDETRPLSATSVGSVVVQDRLNELVRLFKGRTERQKERLI
DPDESEEESPAASPSKAPPPPPPPPPPGEEKKDTAGGGEEEKEEEKEFKFELLGYEVKIP
NLPKLPQMPGWLRAILEYRFPSSIDPFTDLIYVIWLFFVVAAWNWNVWLIPVRWAFPYQT
PENIHLWLLADYTFDFIYIIDILVFQPRLQFVRGGDIVCDKKDMREHYMTTERFKMDIIS
LFPLEVFYYFTGVNSLLRFPRLLKYMVFSEFNDRMESVMKKAYIYRVIRTSMYLLYSLHI
NACLFYWGSDYEGLGSTKWVYNGKGNAYIRCYYFAVKTLITIGGLPDPTTVFEICFQLIN
YFVGVFAFSIMIGQMRDVVGAATAGENYYRACMDSTVKYMTSYNIPREVQNRIKTWYDYT
WKSQGMLDEQELLIQLPDKMRMDIAVDVNYAIVSKVALFQGCDRQMVFDMLMRLKSVVYL
PGDFVCKKGEIGREMYIIKQGEVQVVGGPDLETVFVTIRAGSVFGEISLLAGGGGNRRTA
NVKAHGFANLFILDKNDLAEILVHYPESEKLLRKKAKKMLTKDKKPEEKEEGKGAKTVIP
PRPDTPEMFKAALKVTEQAGIEGTFAKLKKVYRPSEAGEAQAPPSISPIPPPSPMHRRSP
VPLSPAPEDGEETVAETADSSVIIRMTPRHKGEELLTVEMKAGERGGEEEKEETKEKEEE
PSKE
NT seq
3975 nt
NT seq
+upstream
nt +downstream
nt
atgttgagctgggtggtcaaagttgttccccagccgcctgagcccaaaaaatcagaagaa
cagaaggatgctgccccgccccctgctcctgccccgccccctgcagctgctccgcctcca
gttactgagaagaaagtgaagtttcaagatgaagtcaaaagtgaaacaccaaaagctgaa
aaaccaatgcaggaacctcagacaggagcggagaatggcccagcagctgggtctcagagc
ggcatgctgacgtggatcagcggcgctttgcctcaacccgcagtctcaccgaaaatgagc
cgagcaaactccactgccaaggaggaagttgaaccagccagtaaacccgaagacgacaaa
gggatgattgcctggatatctcagggtctggagaaggttgttcctcagcctgagttgaag
agcaaagagccgcccacagctgagcagccggcagaggtgcgtcaggctgcacctgctcca
gctgcagagcctccggttactgtggtggaggtgaaactggaccgagatgacaaaactgaa
aacaagccaccgagcatgatagactggatcaaacagggcatcgagaaggtggttcctcag
ccagagatccatgttcgctcaaaaacggaggctgaagctccagctcaagctgaagctccg
cctccagctcctccacctgtccccaaaccagccccagagaccgagaagtccaccaaggaa
gccgaggagccaccaaacatgatgggctggatcgtcaatgggatcggtcgcatgttgcct
cagcccgtgcagaagtcggatgcaggaaatgacgaggtgcagaccatcagtatcatacag
aagaacacagacctggtgctggaggacattgaacaggaagaagtcaaggaaacaaagccg
gaggtgaaggaagagccacagctggagaagaaagaggatgtgaagccatccaaaaaggag
actggagatgcagaatcacaggtggatgagttgagtccactgattgacagcatcaaaaag
gaggctggagaggcagtcctagctcacatggaggaaaggctgcagcaggagcgtctggag
gcagctcgtgtggccgaggagatggccagaaaggcagcggaggaggcagtccgccagctc
gaggtggagcattcagctaagattgtaatagaaacactaccagagtccaatgaacagctg
cccaatatcctggaagaagaaaatgaggatgatccagagttacaaaacctgcaggaggac
agtgaagacagcacagagaatcagagtcctgaggaaaataaagtgacagaggaagataaa
atcaagaccactgttgaggaagagactaaatctgatcaggcagatctcaaaaggtgcatt
gtagacgtctgcccagctgaagatgaaatcaaagcaacaactcaagtggaaaaggtggag
cctgctccagacaaaacccacaagcccccaactccacccactgaatctgaagcaccagag
gaagccactccttcaacagatgcagaaccagtctcccaacaacctgagccactgcctcca
gaaactccacccactaccacggatcagaccagcacagcagaagcagaagaaggtggatgt
ggagaaaactgcagtaaacgtttggctgaagcttcagagctgaaggtggaggcgatggat
gtgatggaagggaaaggtctgaacatcccccagattatcaccaccccagaaccagaaccg
aacaatctcacagccccagagctcagtgttgcaggtgatgtgtctgcagacgaggacgat
cccgagctgctgagggtcggtttgaaagtctggtccactcagggagaccacctgtctgca
gacgacgagacacgtccgctgtcggcgaccagcgtcggcagcgtggtggtccaggaccgc
ctcaacgagctcgtcagactgttcaaaggtcggacggagcggcagaaagaacggctgatc
gacccggacgaatcggaggaagaaagtcccgcagcctctccaagcaaagctccgcctccc
cctcctcccccgcctcccccgggagaggagaagaaagacacagcaggaggaggagaagag
gaaaaggaggaggaaaaggagtttaaatttgagcttctgggatatgaggtcaaaattccc
aatctgcccaaacttccccagatgcctggctggctccgagccatcctggagtaccgcttc
ccctcgagcatcgacccgttcaccgacctgatctacgtcatctggctgttcttcgtggtg
gcggcgtggaactggaacgtatggctgatccccgtccgctgggcgtttccttaccaaacc
cccgaaaacatccacctgtggctgctggccgactacaccttcgacttcatctacatcatt
gatatcctcgtcttccagcccaggttgcagttcgtccgcggaggagacatcgtgtgcgac
aagaaggacatgagggagcactacatgaccacagagagatttaagatggacatcatcagc
ctgtttcctttggaggtattttactatttcactggagtcaactctctgctgaggttccct
cgcctgctgaagtacatggttttctctgagttcaacgacagaatggaatctgtgatgaag
aaagcgtacatctatagggtgatccgaacctcaatgtacctgctgtactccctgcacatc
aacgcctgcctcttctactggggctccgattatgaaggactgggatccaccaagtgggtc
tacaatggaaaaggcaacgcgtacatccgctgttactactttgccgtgaagacgctgatc
accattggaggactgcccgacccaaccactgtctttgaaatctgcttccaactcattaat
tactttgttggcgtctttgctttctccatcatgatcggtcagatgagggatgtagttgga
gcggcgactgccggagagaactactaccgtgcctgtatggacagcacggttaagtacatg
acctcctacaacatccctcgcgaggtccagaaccgcatcaagacctggtacgactacacc
tggaagagccagggcatgctggatgagcaggagcttctgatccagcttcccgataagatg
aggatggacatcgccgtggacgttaactacgccatcgtcagtaaagtcgccctgtttcag
ggctgtgacaggcagatggtgtttgacatgctaatgaggctcaagtctgtcgtgtacctg
cccggagactttgtttgtaaaaagggggagatcggcagggagatgtacatcatcaagcag
ggcgaggttcaggtggtgggcggtcctgacctggagacggtgttcgtcaccatcagagcc
ggctcggtgtttggagagatcagtctgctggcgggaggcggaggaaaccggcgcacagcc
aacgtgaaggcccacggatttgccaatttgttcatcctggataagaatgacctggcagag
atcctggtgcattaccccgagtccgaaaaactgctgcgcaagaaggccaagaagatgctg
acgaaggacaagaagccggaggagaaggaggagggtaaaggtgcaaagacagtcatcccg
ccacgaccggacacaccagaaatgttcaaggccgccctgaaggtgacggagcaggcaggc
atcgagggaaccttcgccaagctgaagaaagtatacagaccgtctgaggcgggagaggca
caggctcctccctccatttctccaatcccgcccccttctccaatgcaccgccggtctccg
gtacccctgagtccagctccggaagacggagaggaaacggtggcagaaacagccgacagc
tcggtcatcatcaggatgacgccgcggcacaaaggggaggagcttctcaccgtggagatg
aaggcaggagagagagggggggaggaggagaaggaggagacgaaggagaaggaagaggag
ccgtcaaaggagtga
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