KEGG   Maylandia zebra (zebra mbuna): 101478963
Entry
101478963         CDS       T02814                                 
Symbol
patl2
Name
(RefSeq) protein PAT1 homolog 2 isoform X3
  KO
K24823  protein PAT1 homolog 2
Organism
mze  Maylandia zebra (zebra mbuna)
Brite
KEGG Orthology (KO) [BR:mze00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mze03019]
    101478963 (patl2)
Messenger RNA biogenesis [BR:mze03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     101478963 (patl2)
SSDB
Motif
Pfam: PAT1 Sigma70_r1_2
Other DBs
NCBI-GeneID: 101478963
NCBI-ProteinID: XP_012771428
LinkDB
Position
LG8:complement(10833715..10840436)
AA seq 717 aa
MSDSEQQHDVVQVCEPQWPENGEDWSDGEGGTDMDSGLQAMAEEDEEINVHNEETFGMDL
DANGTTEKSSSSLQFGEAPPSPPPPPPATPPPPQPKPRSPRRAPSPPRQKLQYFPWASSR
QRGRSRGQRAALGRGQMFEDPAVMRIIEGRPSLKSLDSAIVDCGTTMYQRPFEDDMMMPS
YRKTRRTSGSILEDSAIVCVIGHRGRGQTLNSNFVDLPYSAGPLYGVRRGESRGLYSRRQ
FGHRGPTQVYPPIVPRSPLFPRQPLTPRQHYNQQTRAFMFPPTHPCPSTPQTPKMMQLRF
GANSPRPSPFYSPSNPVQPFRYPGPATQLHPQHKRLLSQKQRLFQRKPEGWDPYCNLMTA
KEKEWITRLQMIQLQSENPYLEDYYYQEYYRRIESKMAEEELGIRSKREPPKLTTPYVKK
TDSYTPVVHIEGSLGQVAVSTCYSPRRAISAVHAVQPQGLLEYQKDTRLQRLDILNKIEK
LFMVLLEVEETERMKTPLLSEAEERRLVEKIQRKVEHIYSQLQHHNPLESEGDFIPFLLV
SKGKKLVARLLPFLKHDSALKILRVVTTNLPTLMSRDADETLPVLYPPLRNVIGGLAFSQ
LIGVLKDLTSLESLTTYECLELACQNKFGLSLLYALLSQGEKLLSSGVPLEPSIGDFETW
TDIIFQVAGQLSQCSLVEPLLLPSNLLTLFCRYLDKRTVHQLKSNMESVTGCLALPS
NT seq 2154 nt   +upstreamnt  +downstreamnt
atgagtgactcagagcagcaacacgatgtggtgcaggtgtgcgagccgcagtggcctgag
aatggagaggactggagtgatggagaaggtgggacggatatggactcggggctgcaggcc
atggccgaggaagatgaggagataaacgtccacaatgaggagacgtttgggatggatttg
gatgcaaacgggaccacagaaaagtccagcagcagccttcagtttggagaggctccgcct
tcgccgccgccgccgccacctgcaacaccccctcccccacagcccaaacctcggtctccc
cgcagagccccgtcgcctccccgacagaagctgcagtattttccgtgggcttcctcgagg
cagcgcggcagaagtaggggacagagagcagctctgggcagggggcagatgtttgaagac
ccagctgtgatgagaataatcgagggccgaccgagccttaagagtcttgacagtgccata
gtggactgcgggaccaccatgtaccagcgtccctttgaggatgatatgatgatgccctct
tacagaaaaaccagaagaacctcaggatccatacttgaggacagtgctatagtgtgtgta
attgggcacagaggtagaggtcagactctgaactccaactttgttgacttgccgtactcc
gccgggcccctttatggggtcaggcgaggggaatccagaggattgtactccagaagacag
tttggccatcgaggacccactcaggtgtacccacccatagtaccaagatcccccctcttc
ccacgtcagccactgaccccacgccagcattacaatcagcagaccagggcattcatgttt
cctccaacccacccctgcccctcgacgcctcagactcccaaaatgatgcaacttcgcttc
ggagccaactcaccaaggccatcccctttttacagcccctctaatccagtacagcctttc
aggtaccctggtccagccacgcagctccatccccaacacaaacgactgcttagtcaaaaa
cagcggctattccaaagaaagccagagggctgggatccgtactgtaaccttatgacggcc
aaagaaaaggagtggatcacccggctgcagatgatccagctgcaaagtgagaatccttac
cttgaagactactactatcaggagtactatcgtcgaatagaatcaaagatggccgaagag
gagttgggcatcaggagcaagagggagccacctaagctcaccacgccttacgtcaaaaaa
acagactcctacacaccggtggtgcacattgaaggctctttgggtcaagttgcagtttcc
acgtgttactctcctcgccgagccatcagtgctgttcatgcagtccagcctcagggtctg
cttgagtatcagaaagacaccagactacagcgattagacatccttaacaaaatagaaaag
ttgttcatggttctgttagaggtggaggaaactgagaggatgaaaactccattgttgtcc
gaagcagaagaaaggaggttggtggagaagattcagaggaaagtggagcatatctactcc
cagctgcagcaccacaatcccctggaatctgaaggggacttcattccttttctgctcgtc
tccaaaggcaaaaagctcgtcgcccgtctgctgccgttcttgaaacacgattctgcacta
aaaatcttgcgtgttgtcaccactaacctaccaacactaatgagcagagacgcagacgag
acccttcctgtgctttacccacctcttcgaaatgtgatcggtgggctggcgttcagtcag
ctcattggcgtcctcaaagatctgacctctttggagtctctaacgacatacgagtgtctt
gagctggcatgtcagaacaagttcggcctgtccttgctgtacgctctgctctcccaagga
gagaagctgctgtcctcgggtgttcctctagagcccagcatcggggactttgagacctgg
actgacatcatattccaggtggcaggacaactatcccagtgttcgctggtggagccgctc
cttctgccctcaaacctgctcactctcttctgccgttacctggacaagcgtacggtgcat
cagctgaaaagcaacatggagtctgttactggatgcctggctcttccatcttaa

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