Maylandia zebra (zebra mbuna): 101478977
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Entry
101478977 CDS
T02814
Name
(RefSeq) probable global transcription activator SNF2L2
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101478977
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mze03021
]
101478977
03036 Chromosome and associated proteins [BR:
mze03036
]
101478977
Transcription machinery [BR:
mze03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101478977
Chromosome and associated proteins [BR:
mze03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
101478977
Chromatin remodeling factors
BAF complex
101478977
PBAF complex
101478977
GBAF(ncBAF) complex
101478977
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
101478977
NCBI-ProteinID:
XP_014263626
UniProt:
A0A3P9D0B1
LinkDB
All DBs
Position
LG12:complement(32029112..32084135)
Genome browser
AA seq
1585 aa
AA seq
DB search
MSGPSETSGGMSHPGPSPGAGMSPGPILGPSPGPDPSPSSVHSMMGPSPGPGTPNAPHGM
QGQGQSDYSQDSMYSMHKPMEGMNDKSMAEAMHFGHMKGVGMRSLHSGMGPPQSPMDQHS
QGYMSPHPSPMGVHEHASSPMSGGGGGPTPPHMPPSQSGPMMSMDPQGGMPNMGQQVRGS
SAFSPVQLQQLRAQILAYKILGRGQPLPENLQLAVQGKRSLPTMQQQQQQPQQQPQPQAP
SASPYNRPPGMPMAPMGGPQSSPCPAPAMQVLNQSTGPKPWADGQCAENQTIAQKQLTPV
ASGRPSPAPPQASAVPAGPMPGSSGTPQPPGQQGSVMLPIQHKQNRITPIQKPQGLDPVG
ILQEREYRLQARIAHRIQELESLPGSLPPDLRTKATVELKALRLLNFQRQLRQDVVACMR
RDTTLETALNSKAYRRSKRQTLREARMTEKLEKQQKLEQEKKRRQKHQEYLNSILQHAKD
FKEYHRSVSGKMQKLTRAIATWHTNTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQK
KDKRLAYLLQQTDEYVANLTTLVYEHKAAQAAKEKKRRRKRKKKVDGDGEGTSAIGPDGE
PMDESSQMSELPVKVIQTETGKVLQGTEAPKSSQLEAWLEMNPGYEVAPRSDSEESGSEF
EEEEEDEASKGETEEKKIIDPNGDGATEGAAKNIIESAKQDVDDEYSVPTGQTSSQSYYG
VAHAVIERVEKQSSLLINGMLKQYQIQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALI
TYLMEHKRLNGPFVIIVPLSTLSNWVYELDKWAPSVVKIAYKGTPALRRGLVPQLRSGKF
NVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTP
LQNKLPELWALLNFLLPTIFKCCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLR
PFLLRRLKKEVESQLPEKVEYVIKCDMSAIQKVLYRHMQKGILLTDGSEKDKKGKGGAKT
LMNTIMQLKKICNHPYMFQHIEESFAEHLGYPNGIISGPDLYRASGKFELLDRILPKLQA
TNHRVLLFCQMTTLMTIMEDYFGYRNFQYLRLDGTTKSEDRAALLKKFNEEGSQYFIFLL
STRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKI
LAAAKYKLNVDQKVIQAGMFDQKSSGHERRVFLQAILEHEEQNEEEDEVPDDETLNQMIA
RNEDEFELFMRMDMDRRREDARNPKRKPRLMEEDELPSWIIKDDAEVERLTYEEEEEKMF
GRGSRCRRDVDYSDTLTEKQWLRAIEDGNLEEMEEEIRLKKRKRKRRQDKDSGREDGGTK
AKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYRDGSGRQLSEVFVQLPSRKELPEYYE
LIRKPVDFKKIKERVRNHKYRNVGDLEKDVMLLCQNAQTFNLEGSQIYEDSIVLQSVFKS
ARQKIAKDDDSDDDSEEEEDDDDDDSEAEAKSVRVKIKLSREARGHDKGKKRQSRGKAKP
VVSDDDSDEDQDDNDQSDKSKSDDE
NT seq
4758 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcccctcagagacatcaggtggtatgtcgcatcctggcccttctcctggggcg
ggtatgtccccagggcccatcttgggccccagccctggaccagatccctcaccgagctct
gttcacagcatgatgggccccagccctggacccggaacacccaatgcacctcacggcatg
cagggccagggacaaagtgattactctcaggacagcatgtactctatgcataagcccatg
gaggggatgaatgacaagtcaatggcagaggcaatgcactttggtcacatgaaaggtgtg
gggatgaggtctctccacagtggcatgggacctccacagagtcctatggaccagcacagc
caagggtacatgtctccccacccatccccaatgggagtccatgagcacgcttcaagtccc
atgtcaggaggcggaggtggacctacaccaccacatatgcccccttcccagtcaggccct
atgatgtcaatggatccccaaggaggcatgcccaacatgggccagcaggtgagggggtca
tctgcttttagtccagtacagctgcagcagctcagagctcagattctggcctacaagatt
ctgggtcgtgggcagccgctaccggaaaaccttcagctggctgttcaaggtaaaaggagc
ctacccacaatgcaacagcagcagcagcaaccacaacaacagccgcagccacaggcacca
agtgccagtccttacaacaggcctccaggtatgccaatggcacctatggggggtccccag
tcgagtccctgcccagccccagccatgcaagtactcaatcaaagcacaggacccaagcct
tgggccgatggtcagtgtgctgaaaatcaaaccattgcacagaagcagctcactcctgtt
gctagtggtcgcccctctcctgcaccacctcaggcctctgctgtgccagctgggcccatg
ccgggcagttcggggacccctcagcctcctgggcagcaggggtccgtaatgctcccgata
cagcacaagcagaaccgcatcacgcctatccagaagccccagggcttggacccagtggga
atcctgcaggagagagaatacagactgcaggctcggattgcgcatcgaatccaggaactg
gaaagtctgccaggctcgctgcctccggacctcaggactaaagccacagtggagctcaag
gctctgcgtctgctcaacttccagcgtcagctgaggcaggacgtcgtggcctgtatgaga
cgagacacgaccctggagacggccctcaactcgaaggcttaccggcgcagcaagcggcag
acgctgagggaggcacgcatgaccgagaagctggagaagcagcagaagctcgagcaggaa
aagaagcgcaggcagaaacatcaggaatatctcaacagcatccttcaacatgccaaggac
ttcaaagagtatcaccgctctgtgtccggtaagatgcagaagctcaccagagccatcgcc
acctggcacaccaacacggagcgtgagcagaagaaggagacggagagaatcgagaaggag
aggatgaggagactcatggcagaagacgaggaagggtaccgaaaactaatcgatcaaaag
aaagacaagcgtctggcctacttgctgcagcagacggatgaatatgtggccaacctcacc
accctggtgtatgaacacaaagctgctcaagctgccaaggagaagaagaggagacggaag
agaaagaagaaggtggatggcgatggtgaaggcactagcgcaattggacccgatggagag
cccatggatgaaagcagccagatgagtgagctgcctgtcaaagtgattcagactgagacc
gggaaagttttgcagggaaccgaggccccaaaatccagccagctggaggcttggctcgag
atgaaccccgggtatgaagtggccccgcggtcagacagcgaggagagcggctcagagttt
gaagaggaggaggaagatgaggcgtccaaaggagagacagaggagaagaagataatcgat
cccaatggagatggagccactgagggtgctgccaagaacatcatcgagtcagccaagcag
gatgtggatgatgagtacagtgttcctactggccaaaccagctcccagtcttactacggc
gtggcccacgctgtcattgagagggtggagaagcagtcgtcactgttgatcaatgggatg
ctcaaacagtaccagattcaggggctcgagtggatggtgtccttgtacaacaacaatctc
aacggcatcttggctgatgaaatggggctcggcaaaaccatccaaaccatcgcccttatc
acctacctgatggagcacaagaggctcaatggtccctttgtcatcatcgttcctctctcg
accttgtctaactgggtctatgagcttgacaaatgggctccgtctgtggttaagattgct
tacaagggcacccctgctttgcgtcgtgggctggtgcctcagctccgcagcgggaagttc
aacgtcttgctgaccacctatgaatacatcatcaaagacaagcatatactggctaagatt
cgctggaagtacatgatcgttgacgagggtcaccgcatgaagaaccaccactgtaaactg
acacaggtgctgaacacgcactacgtggccccccgtcggctgctcctcaccgggactcct
ctgcagaacaagctgcccgagctgtgggccctgctcaacttcctgctgcccaccatcttc
aagtgctgcagcaccttcgagcagtggtttaacgcacccttcgccatgacaggagagagg
gttgacttaaacgaggaggaaaccatcttgatcatccggcgtctgcacaaagtgctccgc
ccgtttctcctgcgcaggctgaagaaagaggtggagtctcagctgccagagaaggtggag
tatgtcataaagtgtgacatgtctgccatacagaaggttctgtaccgccacatgcagaaa
ggcatcctcctcactgacggctcagagaaagacaagaagggcaaaggtggagcaaagacc
ttaatgaacaccatcatgcagctgaagaagatctgcaaccacccgtacatgttccagcac
attgaagaatcctttgctgagcacttgggctatccgaacggcatcatcagtgggcctgat
ctgtatagagcatctgggaagtttgagctcctcgatcgcatcctaccgaagctccaggcc
accaaccacagagtgctgctgttctgccagatgaccactctcatgacaatcatggaggac
tatttcggataccgcaactttcagtacttgcgtcttgatggaaccaccaagtccgaggac
cgagcagcactgctgaagaaattcaatgaggaaggctctcagtacttcatcttcctcctg
agtaccagagctggcggcctcggcctcaacctgcaggctgctgacactgtggtcatcttt
gacagtgactggaaccctcaccaggaccttcaggctcaggaccgggctcaccgcatcggc
cagcagaacgaggtgcgcgtgcttcgtctctgcactgtcaacagcgtcgaagagaaaatc
ttggctgctgccaaatacaaactgaacgttgatcagaaggtcatccaggccggcatgttt
gaccagaagtcgtcgggccacgagcgccgcgtctttctccaggccatcttggagcacgag
gagcagaacgaggaggaagatgaggtgcctgatgatgaaactctgaaccagatgatagcc
cgcaatgaggatgaatttgagctcttcatgcgcatggacatggaccggcgcagggaggat
gctaggaacccaaagcgtaagcctcgcctaatggaggaggacgagctgccttcttggatc
atcaaagacgacgccgaagtggagcggctcacctacgaagaggaggaggagaagatgttt
ggtcgagggtctcgctgccgtcgggacgtggactacagcgacacgctgactgaaaaacag
tggctgcgggcgattgaagatggaaacctggaggagatggaggaggagatccggctgaaa
aagcgcaaacgcaaaagacgtcaggacaaggactccggcagagaggacggaggcacgaag
gccaagaagagacgtggacgaccgccagcagagaagctgtcccccaacccgcccaaactc
accaagcaaatgaacgccatcattgatacagtgatcaactacagagacggctctggaagg
caactcagtgaagtgtttgtccagcttccatccaggaaggaactcccagaatattacgaa
ctgatccgaaaacccgtggacttcaaaaaaatcaaggaacgtgtgagaaaccataaatac
aggaacgtgggggacctggagaaggacgtgatgctgctctgtcaaaacgcacagaccttc
aacttggagggatcccagatatacgaggactccatcgttcttcagtctgttttcaagagc
gccagacagaagatcgccaaggacgatgacagcgatgacgacagtgaggaggaggaggac
gacgacgacgatgactcagaggccgaggccaagtcagtgcgggtaaagatcaagctgagc
agggaggcacgcggccacgacaaaggcaagaagaggcagagccgagggaaggccaagccg
gtggtcagcgacgacgacagcgacgaggaccaggatgataatgatcaatcagacaagagc
aaaagtgatgacgagtga
DBGET
integrated database retrieval system
