Maylandia zebra (zebra mbuna): 101479056
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Entry
101479056 CDS
T02814
Symbol
chd4
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 4 isoform X1
KO
K11643
chromodomain-helicase-DNA-binding protein 4 [EC:5.6.2.-]
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101479056 (chd4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mze03036
]
101479056 (chd4)
Chromosome and associated proteins [BR:
mze03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
101479056 (chd4)
Chromatin remodeling factors
NuRD complex
101479056 (chd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
ResIII
HDA2-3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
101479056
NCBI-ProteinID:
XP_014266075
LinkDB
All DBs
Position
LG11:complement(19118877..19145819)
Genome browser
AA seq
1974 aa
AA seq
DB search
MSCSEDEREDFGTADEHSLIHDEDEPEDAVSDVEEVPKSKKKKKAKKSSRENRSSKRQRP
IREELPVSSPEHLLGVEAAERDADEGGMRSESEGSDYAPGRKKKKRSSSAKDKKKGGAAA
EKGGSSSSKSKRKEPEPEDDEDDDDDCQPKSSTQLLEAWGMKDIDHVFTQEDYSSLTNYK
AFSQFVRPLIAAKNPKIAVSKMMTLMMAKWREFSTNNPLKGCATANAALAAANVATAVEN
MVVAGTESGADTAPATLTPPVSTPAAAPAPTAPPAAPAPPLRKAKTKEGKGPNARRRSKP
TSKPPPKPKPKKVAPLKIKLGGLNSKRKRSSSDEDEPDVDSDFDDGSFSVSDGSSRSSRP
KKKPKSAKKKKKVETEDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKA
PEGKWSCPHCEKEGIQWEARDDLSEAEGEDDDDRRDEGMEEEDDHHIEFCRVCKDGGELL
CCDTCPSSYHIHCLNPPLPEIPNGEWICPRCKCPPMKGKVQKVLTWRWGEAPAPMPVPRP
ADLPADAPDPPPLAGRREREFFVKWCNMSYWHCSWVQELQLELNCQVMFRNYQRKTDMDE
PPPADFGGEGDDDKSTKRKNKDPLFVHMEEEFSRYGVKMEWLMIHRVLNHSVDKKNNVHY
LIKWRDLPYDQSTWESEDMDIPEYDPYKQTYWNHRELMMGEEGRPGKKLKKTVKVKKAER
PPANPVVDPTIKFDRQPDYLDSTGGTLHPYQLEGLNWLRFSWAQATDTILADEMGLGKTV
QTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYIGDKDSRAVIREN
EFSFEGNAIRGGKKASKMKKDSPVKFHVLLTSYELITIDQAVLGSIEWACLVVDEAHRLK
NNQSKFFRVLNNYPLQHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADIAK
EDQIKKLHDMLGPHMLRRLKADVFKHMPSKTELIVRVELSSMQKKYYKFILTRNFEALNT
RGGGNQVSLLNVVMDLKKCCNHPYLFPAAANEAPKLPNGMYEGTALTKSSGKLMLLQKMM
RRLKEGGHRVLVFSQMTKMLDLLEDFLENEGYKYERIDGGVTGNLRQEAIDRFNAPGAQQ
FAFLLSTRAGGLGINLASADTVIIYDSDWNPHNDIQAFSRAHRIGQNRKVMIYRFVTKAS
VEERITQVAKKKMMLTHLVVRPGLGSKMGSMSKQELDDILKFGTEQLFKDEIGDGDNKED
DSSVIHYDDQAIDRLLDRNQDATDDTELQSMNEYLSSFKVAQYVVKDEDDEEEEVEREVI
KQEESVDPDYWEKLLRHHYEQQQEDLARNLGKGKRTRKPVNYNDGSQEDRGIRQDWQEDQ
SDNQSDYSVASEEGDEDFDERTEANARRPNRKGLRNDRDKPLPPLLARVGGNIEVLGFNA
RQRKAFLNAVMRYGMPPQDAFTNQWLVRDLRGKSEKEFKAYVSLFMRHLCEPGADGAETF
ADGVPREGLSRQHVLTRIGVMSLIRKKVQEFEHVNGQWSMPWMAELEENKRAAALAAGED
PKTPSTGTPADTQPNTPVPEDLSKSEDKEDTKKEGEDGKAAKKADDPEIIEIPDESEKSP
VLDKKEEADSAAEKEDREKETDGVEGKEKEAEDLSKEKEEKSVEKDASADIKGEGSESKT
DLVESRSRADEGKDEKMEAAEEKKEQKEEKDSVKPDESGKLQNGENAKDGGTAAPVVNVS
EEKKKATKQRFMFNIADGGFTELHSLWQNEERAATVTKKTFEIWHRRHDYWLLAGIIQHG
YARWQDVQNDVRFAILNEPFKGEMSRGNFLEIKNKFLARRFKLLEQALVIEEQLRRAAYL
NMTEDPAHPSMALNTRFSEVECLAESHQHLSKESMSGNKPANAVLHKVLKQLEELLSDMK
ADVTRLPATIARIPPVAVRLQMSERNILSRLASRGPEVTAQNQSQTAQQMQVPR
NT seq
5925 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgcagcgaggatgagagggaagactttgggaccgcggacgagcactcactaatt
cacgatgaggacgagccggaggatgctgtgtctgacgtagaagaggtaccaaagtccaag
aagaagaagaaagccaagaagagcagccgagagaataggagcagcaagcggcagagaccg
atccgagaggagttgccagtcagctccccagagcacctgcttggagtggaggcagcagag
agggatgctgatgagggaggtatgcggtcagagagtgaaggaagtgattatgcaccaggg
aggaaaaagaagaaacggtccagctccgccaaagacaagaagaaaggaggtgcggcggca
gagaaaggaggctcgtccagctcaaagagcaaacgtaaagaaccagagccagaagatgat
gaggacgatgacgatgattgccagccgaaaagctccacccagctgctggaagcctggggt
atgaaagacattgaccacgtctttactcaggaagactacagctccctcaccaattacaag
gccttcagtcagtttgtcaggccattaattgcagctaagaaccccaaaattgctgtgtcc
aagatgatgactttaatgatggccaagtggcgtgaattcagtacaaacaaccctctgaag
ggttgtgccactgctaatgcagccctggcagctgccaatgtggcgacagctgtggagaac
atggtggtggcagggacagagagcggggcagataccgctcctgctacattgactccacct
gtttcaactcctgctgctgctccagcacctactgcacccccagcagccccagcacctcct
ctccgcaaggccaagaccaaagagggcaaaggtcccaatgctcgtaggaggtcgaagccc
acatctaagcctccaccgaaaccaaaacctaagaaggtggctccactcaaaattaaactt
ggaggcctcaacagcaagaggaagcgctcctctagcgatgaggacgaacctgatgttgac
agcgactttgatgatgggagcttctcagtgtcagatggctccagccgcagcagtcgtcct
aagaagaagcccaaaagtgcaaagaaaaagaaaaaagtcgagacagaagatggtgacggc
tatgagacagaccaccaggattactgtgaggtgtgtcagcagggaggagagatcattttg
tgtgacacctgtccgagggcttatcacatggtctgtctggaccctgacatggagaaggca
cctgagggcaagtggagctgcccgcactgtgagaaggagggaatccagtgggaagccagg
gatgatctgtccgaggccgaaggtgaggacgatgacgacaggagggatgaagggatggag
gaggaagacgaccaccacattgagttctgccgtgtgtgtaaggacgggggagagctgctt
tgctgtgacacctgcccctcctcctaccacatccactgcctcaaccctcctctccccgag
atccccaatggagaatggatctgcccccgctgcaagtgtccaccgatgaagggaaaagtg
cagaaggttttaacatggcgctggggagaagcaccagcccctatgcccgtaccccggcct
gctgatctgcctgctgatgctcctgacccaccacctctggcaggccgtagagagagggag
ttctttgtcaagtggtgcaacatgtcgtactggcactgctcctgggtgcaggagctacag
ttggagctgaactgccaagtgatgttccgcaactaccaaaggaagactgacatggatgaa
ccgccgcctgctgactttggaggcgagggtgacgatgacaaaagcacgaagaggaagaac
aaagatccactctttgtccacatggaggaggagtttagccgctatggagttaagatggag
tggctgatgatccaccgcgtccttaaccacagtgttgataaaaagaataatgtgcattac
ctgatcaagtggagagatctgccatatgatcagtccacctgggagagtgaagacatggac
attccagagtatgacccctacaaacagacttactggaatcacagagagttgatgatgggt
gaggaaggcagacctggcaagaagctgaaaaagacagtcaaagtgaagaaggcagagcga
ccgcctgctaatccagttgtagatcccaccatcaagtttgaccgtcagcctgactatctg
gacagcacaggaggaactctgcatccctaccagctggaaggtttgaactggctcaggttt
tcttgggctcaagccactgacacaatcctggctgacgagatgggtttgggcaagaccgtt
cagacagctgtcttcctctactcattgtacaaggagggtcactccaaaggccccttcctt
gtcagcgctcctctgtccaccatcattaactgggagagggagtttgagatgtgggctcct
gacatgtatgtggtcacctatataggggataaagacagcagggctgttattagagagaat
gagttctcctttgagggaaacgccatcagaggaggaaaaaaggcgtccaagatgaagaaa
gactcaccagtcaagttccatgttctgctgacatcctatgaattgatcaccattgaccag
gctgtgctgggctccattgaatgggcatgtctggttgtagatgaggcacacagactgaag
aacaaccagtccaagttcttcagagtgttgaacaactacccgctgcaacacaagctgctg
cttacaggcactccacttcagaacaacctggaggagctcttccatttgctgaacttttta
accccagagagattcaataatctcgaagggtttctggaagagtttgcggacatcgcaaaa
gaggaccagatcaagaagctccatgacatgctgggaccacacatgctcaggaggctgaag
gctgatgtatttaaacacatgccttcaaagaccgagctcattgttcgagtggagctgagc
tccatgcaaaagaaatactacaagttcattttaacacgtaactttgaggccctgaacact
cgtggaggaggaaatcaagtatctctgctcaatgttgtgatggacctcaaaaagtgctgt
aaccacccctacctctttccagcagctgccaatgaagcgccaaaacttccaaatggcatg
tatgaaggcactgccctgaccaagtcttcagggaaactgatgctgctccagaagatgatg
agacggctgaaagaaggaggccacagggttttggttttctcccagatgactaaaatgctc
gacttgctagaggacttcctggagaacgagggttacaaatatgagaggattgatggagga
gtcactggcaacttgagacaggaggccattgatcgctttaatgctcctggtgctcagcag
tttgccttcctcctctctaccagagctggtggtttgggcattaacctcgcttctgctgat
actgttattatctatgactccgactggaatccccacaatgacatccaggccttcagcaga
gctcatcgtattggccagaacaggaaagtgatgatttatcgctttgttaccaaagcgtct
gtggaggagaggataacacaggtggcaaagaagaagatgatgctcacccacctggtggtg
cgacccggcctcggatctaagatgggctccatgtccaagcaggagcttgatgacatcctc
aagtttggaactgaacaactgtttaaagatgaaattggagatggggacaacaaggaggat
gacagcagtgtgatccactacgatgatcaggcaattgaccgtttgcttgacaggaaccag
gatgccacagacgacactgagctccagagcatgaacgaatacctcagctcgttcaaagtg
gcacagtatgtggtgaaagatgaagatgatgaggaggaggaggtggaaagggaggtgatc
aagcaggaggaaagtgttgatccagactactgggagaagctgcttcggcaccactacgag
caacagcaggaggatctcgcccgcaatttgggcaaaggcaaaagaactcgaaagccagtc
aactacaatgatggctcccaggaggaccgaggtataagacaggactggcaggaggatcag
tctgataaccagtctgattactcggtggcctcagaggagggcgatgaggactttgatgaa
cggactgaagccaatgcccgcaggccaaaccgcaaagggctgaggaacgaccgggacaag
cctctacccccactgttggccagggttggtgggaacatcgaggtgctgggattcaacgca
cggcagaggaaggctttcttaaatgcagtgatgcgttatgggatgcctccccaagatgcc
tttactaaccagtggctggtcagagacctacgaggaaagtcagagaaagaattcaaggcc
tatgtgtctctgttcatgcgtcacctttgtgagccgggggccgacggagccgagacgttt
gctgacggcgtccctcgggagggtctgtcaagacagcacgtgctcactcgcatcggtgtg
atgtcactcatacggaaaaaggtgcaggagtttgaacatgtgaatggtcagtggtcgatg
ccctggatggccgagttggaggaaaacaaaagagccgcagctttggctgcaggagaagac
ccaaagactccttccacagggactcctgcagacacacagcccaacactcctgtgccggag
gatttgtctaagtcagaggacaaggaagacacgaagaaggagggagaggatggcaaagct
gctaagaaggcagatgatccagagattattgaaatcccagatgagtctgaaaaatccccc
gttctggacaagaaagaggaagcagactctgctgcagagaaggaggacagagagaaggag
acagatggagttgaagggaaagagaaagaagctgaagacctgagcaaagagaaagaggag
aagtctgtggagaaggacgcttctgccgacatcaagggtgaaggttcagagagcaagact
gatttagtggagagcaggtctagagctgacgaaggcaaagatgagaaaatggaagctgca
gaggagaaaaaagaacaaaaagaggagaaggacagtgtgaaaccagacgagtctggcaaa
ctgcagaatggagagaacgccaaagacggaggaacagctgcacctgtggttaatgtcagt
gaagagaagaagaaagccaccaagcagaggttcatgttcaacatcgctgacggaggattc
acagagcttcactctctgtggcagaatgaggagagagcagctaccgtcaccaagaagacc
tttgagatttggcaccgccgccatgactactggctgcttgctggcatcatacaacacggc
tacgctcggtggcaggatgtgcagaacgacgtgaggtttgccatcctcaatgagcccttc
aaaggggagatgagcagaggcaacttcctagagatcaagaacaagtttctggcccgcagg
ttcaagttactcgagcaggcgctcgtgatcgaagagcagctgcgcagggcggcctacctg
aacatgacagaggacccggctcacccctccatggccctaaacacacgtttcagtgaggtg
gagtgtctcgccgagtcccaccagcatctcagcaaagagtcaatgtctggaaacaagcct
gccaatgcagtgctgcataaagttctcaaacagctcgaggaactgctgagcgacatgaag
gccgacgtcacccgtctcccagctaccatcgccaggataccccccgtggccgtgcggcta
caaatgtccgagaggaatatcctcagccgattggccagccggggccccgaggtcaccgct
cagaaccaatcacagaccgcacagcagatgcaggtgccgcgctga
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integrated database retrieval system
