Maylandia zebra (zebra mbuna): 101479474
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Entry
101479474 CDS
T02814
Symbol
ddx18
Name
(RefSeq) ATP-dependent RNA helicase DDX18
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
mze
Maylandia zebra (zebra mbuna)
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mze03041
]
101479474 (ddx18)
03009 Ribosome biogenesis [BR:
mze03009
]
101479474 (ddx18)
Enzymes [BR:
mze01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101479474 (ddx18)
Spliceosome [BR:
mze03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
101479474 (ddx18)
Ribosome biogenesis [BR:
mze03009
]
Eukaryotic type
90S particles
Helicases
101479474 (ddx18)
Pre-60S particles
101479474 (ddx18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
101479474
NCBI-ProteinID:
XP_014263138
LinkDB
All DBs
Position
LG16:complement(27154095..27160205)
Genome browser
AA seq
655 aa
AA seq
DB search
MADLQMKLLRKKIQKRNEKDRERKLQKKKREDEVTGEDGEEGEDVSLTVSSNGLQEEVPR
ELKKKQKKKKNQEEEEGPVEGTSTEETQMKKKAKRKQLAEGAEPPAVKKSKTAKEEENGE
EDTEEEEVADDNGDAAADKPQEEEEDEPELPCGLTGAFEDTSFASLASIVSENTLKGVKG
MGFEHMTEIQHKSIRPLLEGRDVLAAAKTGSGKTLAFLIPCIELIYKLKFMPRNGTGVII
LSPTRELAMQTYGVLKELMTHHVHTYGLIMGGSNRSAEAQKLANGVNIVVATPGRLLDHL
QNTSGFMYKNLQCLIIDEADRILEVGFEEELKQIIKLLPKRRQTMLFSATQTRKVEDLAR
ISLKKEPLYVGVDDNKDKATVDGLEQGYVVCPSEKRFLLLFTFLKKNRKKKLMVFFSSCM
SVKFHYELLNYIDLPVMAIHGKQKQTKRTTTFFQFCNADSGILLCTDVAARGLDIPEVDW
IVQYDPPDDPKEYIHRVGRTARGIDGRGHALLILRPEELGFLRFLKQAKVPLSEFEFSWS
KISDIQSQLEKLIEKNYYLHKSAQEAYKSYVRAYDSHSLKQIYNINTLNLPMVALSFGFK
VPPYVDLNVHSSKGAKLQKRGGGGGFGYQKSKNVQKSKIFKHVNKGKSDRRQFSR
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggcggacctccagatgaagcttctccgaaagaagatccagaagcgaaacgagaaggac
agagagcgcaaattgcagaagaagaagcgggaagacgaagtaacaggagaagatggagaa
gaaggagaagatgtgagtctgacggtgagctcaaacggcctccaggaggaggtacccaga
gagctaaagaagaaacagaagaagaagaagaatcaggaggaggaagagggaccagtggaa
gggaccagcacagaggaaactcagatgaagaagaaagcgaaaaggaagcagctggctgag
ggtgctgaacctccagccgtgaaaaagagcaaaactgcaaaagaagaagaaaatggggag
gaggacacggaggaggaagaagtagcagatgacaatggagatgcagctgctgacaaacca
caagaagaggaggaagatgagcctgagctgccgtgtggactcacaggggcgttcgaggac
acatcctttgcctctctcgccagtatagttagcgagaacacgctgaagggagtgaagggc
atgggcttcgagcacatgaccgagatccagcacaaaagcatccgccctctgctggaggga
agggatgtcctggctgcggcaaagacaggcagcggtaaaactctggccttcctcattccg
tgcatcgagctcatctacaaactcaagttcatgcccaggaatggcaccggcgtcatcatc
ctgtctcctacacgcgagctggccatgcagacctacggcgtgctgaaggagctgatgacg
caccacgtgcacacttacggtctgatcatgggagggagcaaccgctcagctgaggcccag
aagctcgccaacggcgtcaacatcgtggtagccacacccggacgcctgctggaccacctg
cagaacacgtccggcttcatgtacaagaacctgcagtgtctgattatcgacgaggccgac
cggatcctggaggtgggcttcgaggaggagctaaagcagatcatcaaactgctgccgaag
cggaggcagacgatgctgttttcagccactcagacaaggaaggtggaggacttggctcgc
atctccctgaaaaaggagcccttgtatgtcggggtggacgacaacaaagacaaggccact
gttgatggcctcgagcagggctatgtggtgtgtccatcagagaagcgcttcctgctgctt
ttcaccttcctgaagaagaaccgcaagaagaagctgatggtcttcttctcttcctgcatg
tctgtgaaattccactatgaactgctcaactacatcgacctgcccgtcatggccatccac
ggcaagcaaaagcagaccaaacgtaccaccaccttcttccagttctgcaacgctgactcc
ggcatcctgctgtgcacagacgtggcagctcgagggctggacatccccgaggtggactgg
atcgtgcagtacgaccctccagatgaccccaaggagtacatccacagggtgggtcggact
gccagaggcatcgatggtcgaggccacgccctcctcatcctgcggccagaagaactcggc
ttcctgcggttcctcaaacaggccaaggtcccactgagtgagtttgaattttcctggagt
aaaatctccgacatccagtctcagctggagaaacttatcgaaaagaactactacctccac
aagtctgcccaggaggcctacaagtcctacgtgagggcttacgattcccactcgctcaaa
cagatctacaacatcaacaccctgaacctccccatggtggcgctctcatttggattcaaa
gttcctccatatgttgatctcaacgtgcacagcagtaaaggagccaagctgcagaagcga
ggtggcggcggtggttttggataccagaagtccaaaaacgtgcagaaatcgaaaattttc
aaacacgtgaacaaaggaaagagcgaccgaaggcagttctcccgctga
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