Maylandia zebra (zebra mbuna): 101479638
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Entry
101479638 CDS
T02814
Symbol
smc1a
Name
(RefSeq) structural maintenance of chromosomes protein 1A
KO
K06636
structural maintenance of chromosome 1
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze04110
Cell cycle
mze04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
101479638 (smc1a)
04114 Oocyte meiosis
101479638 (smc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mze03036
]
101479638 (smc1a)
Chromosome and associated proteins [BR:
mze03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
101479638 (smc1a)
Meiosis-specific proteins
Cohesin complex and associated proteins
101479638 (smc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_23
AAA_29
ABC_tran
Motif
Other DBs
NCBI-GeneID:
101479638
NCBI-ProteinID:
XP_004558799
UniProt:
A0A3P9DPU9
LinkDB
All DBs
Position
LG20:complement(2878415..2891044)
Genome browser
AA seq
1231 aa
AA seq
DB search
MGYLKLIEIENFKSYKGRQIIGPFHKFTAIIGPNGSGKSNLMDAISFVLAEKTSNLRVKT
LKDLIHGAPVGKPAANRAFVSMVYQEDNGEERAFTRVIIGSSSEYRINSKVVGLPEYSEE
LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDRRKKEMVKAEE
DTQFNYHRKKNIAAERKEAKQEKEEAERYQRLKDEVARASVQLQLFKLYHNETEIERLNK
ELGQRNKEIDKDRKKMDHVEEELKDKKKELGRLMREQQTIEKEIKEKDSELNQKRPQYIK
AKENTSHKIKKLEAARKSLQNAQKMYKKRKADMDELDKEMRAVELAKQEFEERMEEEAQS
QGQDLTLEENQVKQYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK
IKQKIREIEENQKRIEKLEDYIATSRQSLDEQKRMEEELTEEVESAKRRIDEINMELNQV
MEQLGDARIDRQENSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK
NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELRGAKLVIDVIRY
EPPHIKKALQYACGNALVCENVEDARRIAFGGPYRHKTVALDGTLFQKSGVISGGASDLK
AKARRWDEKAVDKLKEKKEKLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE
QTKTRHLSLNMQEKSKLESELANFGPRINDIKRIIQSREREITDLRDRMNLVEDEVFVEF
CKEIGVRNIREFEEEKVKRQNEIAKKRLEFETQKTRLGIQLDYEKNQLKEDQEKVMMWEQ
TVKKDEAEIERLKKEEHRHMKIIDETMAQLQDLKNQHLTKKSEVNDKNHEMEEIRKKLGG
ANKELTQLQKEVTAIETKLEQKRSDRHNLLQACKMQDIRLPLRSGTMDDISQGEGSSQTD
ESSSQRTSSSVLAKEALIEIDYSNLSEDLKDALSEEEIKAETNTLQQRLNEQQSILQRIS
APNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNNCFESVSTNI
DEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALALL
FAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKDQSMENFQAIVISLKEEFYTKADSLI
GVYPEQGDCVISKVLTFDLSQYPDANPNPNE
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgggttatttaaaactgatagagatcgaaaatttcaagtcgtataaaggaaggcagatc
atcggaccttttcacaagtttactgcaatcatcggacccaatggatctggaaagtccaac
cttatggatgccatcagcttcgtgttggcagagaagacaagtaacctgcgtgtgaagact
ctgaaggatctaatccatggagcgcctgtagggaagccagctgccaacagagcctttgtc
agcatggtgtaccaggaagataatggagaagaacgtgccttcacaagagtcattattggt
tcttcctctgagtatcgcatcaacagtaaagtagtgggcctgcctgaatacagtgaagaa
ctggaaaaacttggaattctgataaaggctaggaacttcttggtctttcagggagccgtt
gagtctattgccatgaagaaccccaaagagcgtacggcgctgtttgaagagatctcccgt
tcaggagagctggcccaggagtatgaccggaggaagaaggagatggtgaaagcagaggag
gacacgcagtttaactatcatcgcaagaaaaacatcgctgcagagcgcaaagaggctaag
caagagaaagaagaggctgagcgttaccagcgtcttaaggatgaagtagccagagctagt
gtacagttgcagctcttcaaactgtaccacaatgagactgagatcgagaggctgaacaaa
gagcttgggcagcggaacaaggagattgataaggaccgtaaaaagatggaccatgtggag
gaggagctgaaggacaagaagaaggagctaggcaggctgatgagggagcaacagaccatt
gagaaagaaattaaggagaaggactctgagttgaaccaaaagaggcctcagtacatcaaa
gccaaagagaacacctcacacaaaatcaagaagcttgaggcagcaagaaaatcactgcaa
aatgcccagaagatgtacaagaagcggaaggcagacatggatgagctggataaagagatg
agggcagtggagctggctaagcaagagtttgaggaaagaatggaggaggaggcgcagagt
caaggccaggatctcaccttggaggaaaatcaggtgaagcagtatcatcgtctgaaggag
gaggccagcaaacgtgctgccacgctggcacaggagctggagaagttcaatcgtgaccag
aaggctgaccaggaccgccttgacttggaggagagaaagaaagtggagacagaggccaaa
attaaacagaagatccgtgaaatcgaggaaaaccagaaacgtattgaaaaactggaggat
tatattgccaccagcaggcaatcactagatgagcagaagcgtatggaggaagagctgact
gaggaagtggagagtgccaaaaggaggatcgatgagatcaatatggagcttaatcaggtg
atggagcagcttggagacgccagaatcgacaggcaggagaacagtcgccagcaacgcaag
gccgagatcatggagagtataaaaagactctatcctggctctgtgtatggtcgtctgatc
gacctgtgtcagcccactcagaagaaatatcaaatcgctgtgactaaagtgttgggtaag
aacatggacgccatcattgttgactcagagaagactggcagagactgcattcagtacata
aaggagcagagaggagagccggagaccttccttcctcttgattatcttgaagtgaaacca
accgatgagaaactcagagaactgcgaggagccaagctggtgattgatgtgattcgctat
gaacctccccacatcaaaaaagctctgcagtacgcttgtggcaatgctctggtctgcgag
aatgttgaggatgcgcgaagaattgcttttggagggccatacaggcacaagacggtagcc
ctggacggtactctgttccagaagtctggagtcatctctggaggtgccagcgacttgaaa
gctaaggccagacgatgggatgagaaggcagtggacaagctcaaagagaaaaaggagaaa
ctcactgaagagctcaaggagcaaatgaaggccaagaggaaggaggcagagctccgtcag
gtgcagtctcaggcccacggtctgcagatgagactcaagtactcacagagtgatctggag
cagacaaaaacccgtcacctctccctcaatatgcaggagaagtctaagctagagagtgaa
ttggcaaactttggccctcgcatcaatgacatcaagaggatcatccagtcccgtgagcgg
gaaatcactgacttgcgcgaccgcatgaacctggtggaggatgaggtgtttgtggaattc
tgtaaggagattggagtgaggaatatcagagagtttgaggaggagaaagtgaagaggcag
aatgagattgcaaagaagcgtcttgagtttgagactcaaaagacccgcctgggtatccag
ttggactatgagaagaatcagctgaaggaagaccaggagaaggtcatgatgtgggagcag
actgtgaagaaggacgaggctgaaatcgagagacttaaaaaggaggagcacagacacatg
aaaatcattgatgagacaatggcccagctgcaggacctgaagaaccagcatctcaccaag
aaatctgaagtcaatgataaaaatcacgagatggaggagattcgcaaaaaactgggtggt
gcaaacaaggagttgactcagctccagaaggaggtcactgccatcgagaccaaactggag
cagaagcgcagtgaccgtcacaacctgctgcaagcctgcaaaatgcaggatatcaggttg
cctcttcgttctggaacaatggatgatatcagccagggagaggggagttcccagacggat
gagtccagcagccaaaggacatccagcagtgttttggccaaagaggctcttatagaaatt
gactacagcaacctgtctgaagacctcaaggatgcattgtcagaggaagagatcaaggct
gagacgaacacactgcagcagcgtctgaatgagcagcagagcatcctgcagaggatcagt
gcacccaacatgaaggctatggagaagcttgagagtgtcagggacaaattccaagagacc
agtgatgagtttgaggctgctcggaaaagagccaaaaaggccaagcaagcctttgagcag
atcaagaaggaaagatttgatcgctttaataactgttttgagtcggtgtctaccaatatc
gatgagatctacaaggctctttcacgcaacagtagtgctcaggcatttttaggtccagaa
aacccagaggagccatatttggatggtatcaattataactgtgtggccccaggcaagagg
ttcagaccaatggacaacttgtcaggaggagagaaaactgttgctgccctggctctgctc
ttcgctattcacagctacaaacccgcccccttctttgtgctggatgagattgacgcagct
ctggacaacactaatattggcaaggtggccaactacatcaaagaccagtcaatggagaac
ttccaggccattgtcatttctctgaaggaggaattctacaccaaggcagactctctcata
ggtgtttatccagagcaaggagactgcgtcataagcaaagtgctaacctttgacctctcg
caatatcccgatgccaacccaaatccaaatgagtaa
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integrated database retrieval system
