Maylandia zebra (zebra mbuna): 101479903
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Entry
101479903 CDS
T02814
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 isoform X1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101479903
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mze03041
]
101479903
03009 Ribosome biogenesis [BR:
mze03009
]
101479903
Enzymes [BR:
mze01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
101479903
Spliceosome [BR:
mze03041
]
Complex A
U2 snRNP components
U2 related factors
101479903
Complex B
101479903
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
101479903
Ribosome biogenesis [BR:
mze03009
]
Eukaryotic type
90S particles
Helicases
101479903
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
SRP54
nSTAND3
AAA_29
Flavi_DEAD
AAA_25
Motif
Other DBs
NCBI-GeneID:
101479903
NCBI-ProteinID:
XP_004554473
UniProt:
A0A3P9AX62
LinkDB
All DBs
Position
LG3:complement(26572023..26597959)
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AA seq
751 aa
AA seq
DB search
MSKRHRLDLGDDHSSSKKRSSDGRDRDRDERSRDRDRDRDKDRDVKPSGVPTNPAAGIAG
FLKQPGIQQQINPFTNLPHTPRYYEILNKRLQLPVWEYRERFTEILMRNQSFVLVGETGS
GKTTQIPQWCVDMVRSLPGPKRAVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFE
DCSSAKTVLKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRP
DLKVIVMSATLDAGKFQVYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHM
CEEDEGDALLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPP
PPNKPNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKA
SAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVH
FDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCEFNCS
NEILSITAMLSVPQCFVRPTEAKKVADEAKMRFAHIDGDHLTLLNVYHAFKQNHESTQWC
YDNFVNYRSLMSADNVRQQLSRIMDRFSLPRRSTEFSSRDYYINIRRALVTGFFMQIAHL
ERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQ
YYEMSNFPQCEAKRQLERIIAKLSSKEYTQY
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagcgacatcgtttagatctgggtgacgatcattcgtcgagtaaaaagaggtcc
tccgatgggcgcgacagagaccgtgacgagaggtcgcgggaccgcgatcgagaccgtgac
aaggacagagatgtgaagccgtccggggtgcctacgaacccagctgcaggtatcgccggc
ttccttaagcaacccggtatacagcagcagatcaaccccttcactaacctgccccacacg
ccacgctactatgagatcctcaacaagcggctgcagcttcccgtgtgggagtacagagag
cgcttcactgagatcctgatgcggaaccagtcttttgtgctggtgggagagacaggctct
ggaaagactacacagatcccccagtggtgcgtagacatggtccggtcattgccgggacca
aagagagccgtagcctgcacccagcccaggagggtagcggccatgagcgttgcccagagg
gttgcagatgagatggatgtcatgctgggccaggaggtgggctactccatcaggtttgag
gactgcagctctgccaagaccgtcctcaagtacatgacagatggaatgctgctgcgggag
gccatgaacgatcccctgctggagcgctatggtgtcatcattctggacgaggcccacgaa
cgcacattagctacagacatcctcatgggggtcctcaaggaggtggtccgccagaggcct
gacctaaaggtcatcgtcatgagcgccacactcgacgccggtaagttccaggtgtacttt
gacaactgcccactgctaaccatcccgggacgcacgcaccccgtggagattttctacaca
ccggagccagagcgggactatctggaggcggccatccgcaccgtgatccagatccacatg
tgtgaggaggatgagggggacgctttgctcttcctcactggacaagaggaaatcgacgaa
gcctgcaagcgaattaagagggaggttgacgacctggggcccgaagtcggagatatcaaa
atcatcccgctgtactcgacgctgcctccacagcagcagcagaggatctttgagccaccc
ccgcccaataaaccaaatggcgccatcggaagaaaggtcgtcgtgtcaacaaacatcgcc
gagacgtccctgaccatcgatggggtggtgtttgtaattgatcccggatttgccaagcaa
aaggtgtataacccacgaatccgagtggaatcccttttggtcacagccatcagcaaggcc
tcagcccagcagagggcaggccgtgccggacgtacacgcccgggaaagtgtttccggctt
tacacagagaaagcttacaagacagaaatgcaggacaacacgtatccagaaatcctgagg
tctaatctgggctctgtggtgctgcagctcaagaaactgggcattgatgacctggtgcat
ttcgacttcatggacccaccagctccagagaccctgatgcgagccctggagttgctgaac
tacctggcagcgctcaacgacgacggtgacctgaccgagctgggctccatgatggcagag
ttccccctggacccccagctggccaagatggtcatcgccagctgtgaattcaactgttcc
aatgagatcctctccatcactgccatgttgtcagtcccacagtgctttgtgcgacccacg
gaggccaagaaggtggctgacgaggccaagatgcgcttcgcccacatcgacggagaccac
ctaacgttgctcaacgtctaccatgcctttaaacagaaccacgagtccactcagtggtgc
tatgacaactttgtcaactaccgctcgctgatgtcagcagataacgtacggcagcagctg
tccaggatcatggaccgcttcagcctaccgcgaaggagcactgagttcagcagcagagac
tactacatcaacatccgccgagcactggtcacgggctttttcatgcagattgctcacctg
gagcgcacaggccactacctgaccgtgaaggacaaccaagtcgtacagctgcacccctcc
accgtgctggaccacaaaccggagtgggtgctttacaacgagtttgtgctcaccaccaag
aattacatccgcacatgcacagacatcaaacccgagtggctggtgaaaattgccccgcag
tactacgagatgagtaacttcccccagtgtgaagctaagagacagttggagcgtatcatt
gcaaaactctcatccaaggaatacactcagtactaa
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integrated database retrieval system
