Maylandia zebra (zebra mbuna): 101479917
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Entry
101479917 CDS
T02814
Symbol
cacna1s
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1S isoform X1
KO
K04857
voltage-dependent calcium channel L type alpha-1S
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze04010
MAPK signaling pathway
mze04020
Calcium signaling pathway
mze04260
Cardiac muscle contraction
mze04261
Adrenergic signaling in cardiomyocytes
mze04270
Vascular smooth muscle contraction
mze04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
101479917 (cacna1s)
04020 Calcium signaling pathway
101479917 (cacna1s)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
101479917 (cacna1s)
09153 Circulatory system
04260 Cardiac muscle contraction
101479917 (cacna1s)
04261 Adrenergic signaling in cardiomyocytes
101479917 (cacna1s)
04270 Vascular smooth muscle contraction
101479917 (cacna1s)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mze04040
]
101479917 (cacna1s)
Ion channels [BR:
mze04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
101479917 (cacna1s)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
CAC1F_C
Motif
Other DBs
NCBI-GeneID:
101479917
NCBI-ProteinID:
XP_004558800
LinkDB
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Position
LG20:2860162..2878051
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AA seq
1879 aa
AA seq
DB search
MASNTEAAKPVIMNEEELKRKQREKLKKLQATGGNPRPARSLFLLNLKNPFRKACINIVE
WKTFEIIILLTIFANCIALAVFLPMPEEDTNNTNLNLESLEYIFLVIFTLECFLKIVAYG
FVFHEGAYLRNCWNILDFVIVFMGLFTLFMDTVNMVSGVPKEKGGGFDMKALRAFRVLRP
LRLVSGVPSLQVVMNSILKAMLPLLHIALLVFLLVTIYAIMGLELFKCKMHKTCYYKGTN
IYATAEGELPAPCAQAGNGRRCIINGTECRPDWEGPNNGITHFDNIGFAMLTVYQCITME
SWTKVLYWVNDAIGNEWPWLYFVPLILLGSFFVLNLVLGVLSGEFTKEREKARSRGEFQK
LRERQQLDEDLHGYMEWITHAEVLDADREGKGLLPLTSGDSDTDSLYDLEGKSRIIYYYR
LARRWNRFFRMKCLVYVKTRAFYWVVMFLVFLNTLTIATEYHHQPESLTSFQDVASRVLL
VLFVIEMFVKMYALGPRAYFMSLFNRFDFFVVLCGILEMIMLSAGAVAPLGFSVLRCIRL
LRILKVTKYWKSLSNLVASLLNSIRSIASLLLLLFLFIVIFSLLGMQVFGGKFNFSDHRA
RRSNFDNFPQALISVFQILTGEDWTSIMYNGIMAYGGPVIPGILVSIYFIVLFVCGNYIL
LNVFLAIAVDNLAEAESLTSAQKEKAEEKLRKKLLRAKMPEKTDEEREKITKQRAKIEGM
PTTAKLKIDEFESNVNEVKDPFPPADFPGDDEEEEPEIPISPRPRPMADLQLKEEAVPLP
EASSFFIFGPQNKFRKLCYKIINASSFTNLILLFILLSSISLAAEDPIDPKSPRNQILAY
ADIVFTSVFTIEIVLKMTVYGAFMHKGSFCRNSFNILDLIVVGVSLLSMGMESSAISVVK
ILRVLRVLRPLRAINRAKGLKHVVQCVFVAIKTIGNIVLVTLLLNFMFACIGVQLFKGKF
YSCTDVSKVTEEECQGFYLKHMENSLQDTVVAKREWLNNDFNFDNVLNGILALFTVSTFE
GWPKLLYKAIDSAEEDMGPVFNNRVDVSIFFIIYIIIIAFFMMNIFVGFVIVTFQQQGEQ
EYKNCELDKNQRQCVQYALKARPLKCYIPKNPYQYRVWYIVTSCYFEYLMFFLIMLNTLC
LGMQHCNQSDHVTKLSDILNLIFTVLFTVEMILKLMAFKARGYFGDPWNVFDFIIVIGSV
VDVILSEVDSALADSGGLYCLHGCETNPMQVIAASENASVSITFFRLFRVMRLVKLLNRS
EGIRNLLWTFIKSFQALPHVALLIVMLFFIYSVVGMQIFGKIALVDGTQVNRNNNFQTFP
QAVLMLFRCATGEGWQEVMMASMYGKKCDPKSDFLPGEEYTCGSNFAVFYFLSFYCLCAF
LILNLFVAVIMDNFDYLTRDWSLLGPHHLDEFKKIWAEYDPEATGRIKHLDVVTLLRSIQ
PPLGFGKFCPHRAACKRLVGMNMPLNSDGTVTFNATLFALVRTALKIKTEGTVYMFYATY
MFPSASSATTVTTLHYLESFLTGNFEQANEELRAIIKQIWKRTSMKLLDQVIPPIGDDEV
TVGKFYATFLLQDHLRKFIKRQEEYYGYRPTKKSASGPEIQAGLRSIEEEAAPEMHRAIS
GDLQNEEEMERAMEEAGEEAIYQRSHHLFGNQVESFSTEPANTQSQQVTNMRPLSFSESQ
PESPPSSASALVSGTEFFPTAPPKSNTNNNAFAEFSFERERTPDEFYNPCEDEEAASRHA
WNFTVRTGRTQFPYDPNYGDSQSQSSHTAADHLVQEALEKSGLVSLARDPGFVSLTKKEM
AEAMHISVSDMEGVAQGILKERSSSMTPVKKRRPIPVPSPAPAAATVVTGRPDPAVRRKK
RPIPTVPSAQGPSETDSGV
NT seq
5640 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccaacacagaagcggccaagccggtcatcatgaatgaagaggagctgaagagg
aagcagagggagaagcttaagaaactacaggccactggaggaaaccctcgacccgcgaga
tctctcttcttgctcaacctcaaaaatcccttccgcaaggcctgcatcaacatagtggag
tggaaaacctttgagatcatcatcttattgaccatttttgcaaactgcatcgcgttggct
gtgttcctacccatgcctgaagaagacaccaacaacaccaacttaaatttggaaagtctg
gagtatatcttcctggtcatcttcacgttggagtgcttcttgaagatagtagcgtatggg
tttgtgttccatgaaggggcctatttacgaaactgctggaacatattggactttgtcatc
gtcttcatgggtctctttaccttatttatggataccgtaaacatggtgtcaggtgtgcca
aaggagaagggtgggggctttgatatgaaagcactgagagctttcagagtactgcggcct
ctacgcctcgtttctggagtccccagcctacaggtggtgatgaactccatccttaaagcg
atgctgcctcttctacacattgctctgctcgtcttcttactggtcactatctatgccatc
atggggctggagctctttaagtgcaaaatgcataagacctgctattacaaaggcacaaat
atctacgccacagcagagggtgaactgcctgccccctgtgctcaggctggtaatggacgc
cgctgcatcatcaatggcacggaatgtcggcccgactgggaaggtcccaacaacgggatc
acccactttgataacattggctttgccatgctgacagtataccagtgtatcaccatggaa
agctggaccaaagtgctctactgggtgaatgatgccatagggaatgaatggccctggctc
tattttgttcctctaattctgctgggctcatttttcgtgctcaatctggttctgggtgtg
ctcagtggagagtttaccaaagagcgagaaaaggccaggtcacgtggagagttccagaag
ttacgagagcgtcagcaactggatgaagacctccacggctacatggagtggatcactcac
gctgaagtcctggatgctgatagagaaggaaaaggactcctgcctttgaccagtggagat
tcagacacagacagtctgtatgacctggagggcaagagtcgaataatctattactaccgc
ctggctcggcgttggaaccgtttcttcaggatgaagtgcctggtgtacgtgaaaaccagg
gcgttttattgggtggtgatgttcctggtcttcctcaacactctgaccatagccacagag
taccaccaccagcctgaaagcctgacttcctttcaagatgtggctagccgggtgctgctg
gtgctgtttgtcattgagatgtttgtgaagatgtatgctctgggacccagggcatatttc
atgtctctatttaaccgttttgacttctttgtggtactatgtggtatcctggagatgatc
atgctgtctgcaggtgctgtggctcccctgggtttctctgtactcaggtgtatccgcctg
ctgaggatcctcaaagtcacaaagtactggaagtcactcagtaatcttgtggcctctctc
cttaactccattcgctccattgcctcgctccttcttcttcttttcctcttcattgtcatt
ttctcactcctgggcatgcaggtttttggagggaagtttaacttctctgaccacagagcc
aggcgcagcaactttgacaacttccctcaggccttgatcagtgtgtttcagatcctcaca
ggagaggactggacatccatcatgtacaatggaatcatggcctatggagggcctgtcatt
cctggcatcctggtctccatctacttcattgttctctttgtctgtggaaactatatcctc
ctcaacgtcttcctcgctatcgccgtcgacaacctcgcagaggctgagagtttgacttca
gctcagaaagaaaaggcagaggagaagttgaggaagaagctactaagggcgaaaatgcct
gagaagactgatgaggagagagagaagataactaagcagagggccaagatagaaggcatg
cccaccacagccaagctcaaaattgatgaatttgagtctaatgtcaatgaagtgaaagat
ccatttccacctgctgatttcccaggtgatgatgaggaggaagagcctgaaatccctatc
agcccccggccccgaccaatggcggatctgcagctgaaggaagaagcagttccgttacct
gaagctagctcctttttcatttttggccctcagaacaagttccgtaaattatgctacaag
atcatcaatgcttcgtccttcaccaacttaatcctcctcttcatcctgctctcctccatc
tcattagcagctgaggaccccattgatcccaagtcccccagaaaccagatcttggcctat
gctgatattgtcttcacatctgtgttcaccattgagattgtactgaagatgacggtgtat
ggagcgttcatgcacaaaggctcgttctgtcgtaactctttcaatattctggatctgatt
gtggtcggagtgtctcttctgtctatgggaatggaatccagtgccatctccgtcgtgaag
attctcagggtgttgagggtgctgaggcctctcagagctatcaacagagccaaaggatta
aagcacgtggtccagtgtgtatttgtggccatcaaaacaattggtaacatcgtcctggtc
accctgctgctgaatttcatgtttgcctgcataggagtccaactctttaagggtaaattc
tacagctgcacagatgtgtccaaagtgactgaggaggaatgccaaggtttctacttgaag
catatggagaattccctgcaagacacagtagtggctaagagagaatggcttaacaatgac
tttaactttgacaacgtgctcaatggaattctggctctgttcaccgtttccacattcgag
ggctggccaaaactcttatacaaagccatagattcagctgaagaagacatgggtccagtc
ttcaacaaccgtgtcgacgtgtccatcttcttcattatctacatcatcatcatagccttc
ttcatgatgaacatctttgtgggctttgtcatagtcaccttccagcagcagggtgagcag
gagtataagaattgtgagctggacaagaaccagcgccagtgcgtgcagtacgctctgaag
gctcgtcctctgaagtgctacatacccaaaaacccgtaccagtacagggtctggtacatt
gtcacctcctgctactttgagtacctcatgttctttctgattatgctgaacactttgtgt
cttgggatgcagcactgtaatcagtcggaccacgtcacaaagctgtcagacattctcaac
ttaatcttcacggtgctcttcactgtggagatgattcttaagctcatggctttcaaagca
cggggttactttggagacccgtggaatgtgtttgacttcattattgttattggtagcgtt
gttgacgtcatcctgagtgaagttgatagtgccctggccgatagtggaggactgtactgt
ctccatggctgtgagacgaatccaatgcaagtaattgcggcctctgaaaatgcttctgtt
tccatcactttcttccgactcttccgtgttatgcgtctggtcaaactgctgaaccgttcg
gagggcatccgtaacctgctgtggaccttcatcaaatctttccaggctctgcctcatgta
gctctgctcatcgtgatgctcttctttatctactctgtcgttgggatgcagatctttgga
aagatagcattagtggatggtactcaagtcaaccgcaacaacaacttccagacattccct
caggctgttctgatgttattccgatgtgctactggagagggttggcaagaggtcatgatg
gcgtcaatgtatggaaaaaagtgtgaccccaagtctgacttcctgccaggagaagagtac
acctgtgggtccaattttgctgtcttttacttcctcagcttctactgtctctgtgccttc
ttgatcctcaacttgttcgtagctgtaattatggacaattttgactatctgacccgtgat
tggtctctgcttggtccacaccatctggatgagtttaagaagatctgggctgaatatgat
cccgaagctacggggagaatcaaacatctggatgtggtgacgctgctgcgaagtattcag
cctcctctgggctttggcaaattctgtcctcaccgggctgcatgcaagcgcttggtcggt
atgaacatgcctctcaacagtgatggcacggtcacctttaatgccacgcttttcgctctg
gtcaggactgcactcaaaattaaaacagaaggtacggtatacatgttttatgcaacatac
atgtttccttcagcctcatctgctactactgtaacaacgctccattatcttgaatcgttc
ctaacaggtaactttgagcaggccaatgaggagctgagagccattataaagcagatctgg
aagcgcaccagcatgaaactgttagaccaggtcattcctcctattggagatgatgaggtg
actgtggggaaattctacgcgaccttccttttgcaagaccatttgcgcaagttcatcaag
cgtcaagaggagtattacggctaccgtccaactaagaagagtgcctcaggtccagagatc
caggcggggttgaggagtatagaggaagaagcagctccagaaatgcacagagccatttca
ggagacctgcagaatgaagaagagatggaaagagccatggaggaggcaggagaagaggcc
atttatcagcgttcacaccacctgtttggtaaccaggtagagtcgttctccactgagccg
gctaacactcagtcccaacaggtgaccaacatgcggccactcagtttctctgaaagccag
cccgagtccccaccaagctcagcctcagccttggtgtctggtacagaatttttccccaca
gctccaccaaagagcaacactaacaacaacgcctttgcagaattttcatttgaaagagaa
aggactccggatgagttttacaatccttgtgaggatgaggaggcagccagcagacatgcc
tggaacttcacagtgagaacagggagaacacagttcccttatgaccctaactatggtgac
agtcagagtcagagttcacacactgcagccgaccacctcgtccaagaggctctagagaag
agtggactggtctccctggccagggacccgggcttcgtctcattaacaaagaaagagatg
gctgaagccatgcacatctcagtatctgacatggagggtgtggctcagggcatcctcaaa
gaacgctccagcagcatgacccccgttaaaaagaggcgtcccatccctgtcccttctcct
gccccagcggcggcaacagtggtaacaggccggccagatccagctgtgaggagaaagaaa
cgtccgattcccacggttccctccgcacagggaccgtctgaaaccgactccggagtgtag
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