Maylandia zebra (zebra mbuna): 101480010
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Entry
101480010 CDS
T02814
Name
(RefSeq) serine/arginine-rich splicing factor 6 isoform X2
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze03040
Spliceosome
mze05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101480010
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
101480010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mze03041
]
101480010
Spliceosome [BR:
mze03041
]
Common components
Common spliceosomal components
SR proteins
101480010
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
DbpA
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
101480010
NCBI-ProteinID:
XP_012775349
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All DBs
Position
LG20:7533868..7538807
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AA seq
395 aa
AA seq
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MPRVYIGRLSYHVREKDIQRFFSGYGKLMEIDLKNGYGFVEFEDNRDADDAVYELNGKEL
CGERVIVEHARGPRRDRDGYGGGYWGGGRSSGYSSRSRSGRDKYGPPVRTEYRLVVENLS
SRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRTYSDMKRALDKLDGTDINGRKIRL
VEDRPRRRRSYSGSRSRSRSRRRSRSRRSRSHRSSKSRSRSHSRSRSRSNKRRHHSRSRS
ERKSRSKSGDRKSRSRRSRSRSNRSNKSKSRSRSRKSRSHSPEHKSKSRSKSRSKVKSER
DSRSRSKERSAEKKSRSRSPSPVENGKEEHVAKSASRSPSPQEEECRSQSREKRSKSHSR
SHSKSRSRSRSKSRSRSRSKSRSRSRSRSRSASQD
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgagtttatatcggacgactaagctatcatgtccgcgaaaaagatattcagcgg
tttttcagcggctatgggaagctaatggagattgatttaaagaacgggtatggattcgtg
gagttcgaagataatagggacgccgacgacgccgtttacgagctaaacgggaaggagctg
tgtggggagcgggtgatcgtcgagcatgcccggggcccgcgacgagaccgagatggctac
ggtgggggttactggggtggtgggcgcagtagcggttacagcagccgcagccgctctggc
agggacaaatatggaccgccagtccgcacagagtaccgcctcgttgtggagaacttatcc
agccgctgtagttggcaggacctcaaggacttcatgcgtcaggcaggagaggtgacctat
gcagatgcccacaaggaacgcaccaatgagggagtgattgagttccggacttattccgac
atgaagagggctctggacaagctggatggtactgacatcaacgggcggaaaattcgcctg
gtggaggaccgtcctcgcagacgtcggtcttactctggcagtcgctccagatctcgcagt
cgtcgtcgctcccgtagcaggagaagcagaagccacaggagctcaaagagtcgctccaga
tcccactcgaggtctcgttcccgcagcaataagagacggcatcattcccgctccaggtct
gagagaaagtctcgctccaagtcaggagaccgcaaatcacgttctcgcagatctcgttct
agatccaacagatccaacaaatccaaatctcgttcacgctctcgcaaatctcggtctcac
tcccccgagcacaagtccaagtctcgttcaaagagccgctctaaggtaaagtcggagagg
gattctcgtagccgatcaaaggaacggtctgctgagaagaagtcccgcagccgctcaccc
tctccagtagagaatggaaaagaagagcatgtggccaaatctgcctctcgctccccatct
ccacaagaggaagagtgccgatcccagtccagagaaaagcgctccaagtctcactccagg
tctcactccaagtctcgctccaggtctcgctccaagtctcgctccaggtctcgctccaag
tctcgctccaggtctcgttcacggtctagatcagcttctcaggattag
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