Maylandia zebra (zebra mbuna): 101480567
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Entry
101480567 CDS
T02814
Name
(RefSeq) collagen alpha-1(VII) chain
Organism
mze
Maylandia zebra (zebra mbuna)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
VWA
fn3
VWA_2
Kunitz_BPTI
DUF4992
Motif
Other DBs
NCBI-GeneID:
101480567
NCBI-ProteinID:
XP_024661367
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All DBs
Position
LG17:complement(24151223..24229163)
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AA seq
2561 aa
AA seq
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MGHSSVCIFLLSLYLTHQSVAAHAEACRTVVQADIVFLVDESWSVGHKDFSRIKDFISAI
ISSFQDNVVGADGVRFGVTVFGDVPRMRIALTDYNSLEEVLRAIKDLPYEGGSRRTGMAL
QFLVDSVFSPVIRRDSVPKIAVLITNGQSDDQVSAAVRAVADNGITVFAVGLTGVDEAEL
RRVVSEPHAEHLLPVTDFSTMDTILPKLSRRVCLTASEPPRPVKTSQPSEERVVGPRDLQ
VSELAHSSLRLTWSQATGDVTGYRLLVTPLSSEGQLLPVQQRQMDLKADVSTAMVTELSP
KTDYSLTVYAMYPGLIGDSATIKVKTTPLPEVSNFRVIEEGLFSLRLGWTPPQGKLNGFK
IFIPRSNRPGFIYEQLLPRDISSHVIDSLEEDKKYTVSIYAVYPEGPSKPVSVVGKTLKL
VPVHQFLVQNATTDTVQARWASVKGATGYRLTWASTEGHIENINLGDNFNFYMIQGLHTG
SEYTITINPIFGDIEGPITTAKIKTLESSSVQTLKVSAVSTSTAVVSWNSVPGATGYRLA
WRPTPEFVGRDRPRQLALNTSTTQYQLKNVAHDTEYVLTLYVLFGAAVGPGIAATFRTSP
LGYVSNFKVTSYTSTTIDVAWSPIVGATEYKLSWKTDNSKPQVQYLDRSILFHRLKDLNP
QSTYTVTICAVYGNSEGPEISLSQLTAAVSESDPIQPVREVKVEDIGVNSFTLSWKKASG
ASGYKISWIPFLGGDEKSHVVSADFASYTIRNLRESSAYKIQVSSMVGSREGSAVLVTAR
TLDLPKVEGFVALNTTDNSTVLNWTRVAGASGYRLSWRHISVFDTKTEILGPGFTYYKIS
DLLYGRTYLFTIRPLYGEVEGPISTMYQRILGPARPALTVQPVPPTVPPHSPPNTGDSQT
ASIINTTTAQSPMRTTWHPDVVLPTESLTTKKPHVQPSVTEGKAGAVTSFRLTTLSRVTE
KKTPPQPVCGKTKADIVFLVDESSSIGTDNFRKMKDFIFRVATYFPVIGSQGTQIAVVHY
SDEPRVEFRLNDFKDRNSVLRALRALRYGGGNTKTGKGISYVLQELFQEAHGMRQDVPHV
LVLFTDGKAQDNVVPPSRIARALGVSVLAVGVSNADREELNKIAAPTSYKNIFYSPTFDD
FPSVEREFIRSLCSDELITEFKLQDEGAQLDTPTDDPEEMLKPEGPCLTQCMKGQKGEKG
DSLGLGLRFRQSPGEFDPFTSSKGEKGERGLPGTDGVPGLPGRPGRTGPPGSAGQRGPTG
VPGDMGPPGLPGPKGQRGERGEPGYVIAGTDANFVPGRKGEPGSSGPPGPPSLPGVNGAP
GLPGQPGSPGPPGIAVKGDPGEPGTKGLRGKQGVKGDKGEPGKDGIAGLPGPIGVDGGPG
LPGQKGEKGEEGVGIQGVQGPHGEKGEKGDIGLAGPVGPKGERGEQGIQGIIGPRGKKGM
KGEPGDKGDQGEVGPIGPQGPPGPAGPMGLKGDEGPRGPAGDPAKGVIGPAGKKGARGDI
GPVGSTGPQGIKGEQGDKGEKGSPGFGIPGQQGQKGENGERGNVGLSGKPGQKGKDGSKG
EKGSIGLPGNPGEPGLRGKDGAPGAIVEPGMKGEQGPAGEPGERGIRGPLGLPGKPGDTG
EKGDPGKPGPPGADGRKGDKGEVGDPGEPGQPGLRGEMGPPGPQGMHEFAHKVSYGNRRV
TRDRKESLVRKEKKEIKAGLGLLGCLAYRGLLGDLALMGRGACQEKMEKEDSKEMTGDKG
DAGADGKDGSKGEPGLPGLPGRQVLVTPEGATIDEIRQAFPMPMGPPGPTGSPGLKGDKG
EKGLKGEKGDAGAPGKSLEMKDIETMFEAYGIKALIDRLLQDGIEELLHVLSNSKKTKEN
TERHNSNVITDYKSSEKFDITSRPLSKADTFEDTDVDGQPPESFFVTSEEARQDEEDEFY
NGEDYSYEYEVILPTTESPSRPSDDIEKSTPPSATEEPDQGEIGEKGQKGEPGIGHRGPE
GQAGPPGQKGEPGEPGPPGAQGIQGIPGNPSIQGPTGLRGLPGDPGEAGREGSRGKRGKN
GSPGSPGPRGPPGPHGIPGIPGEKGEKGDSIPGEPGERGVVGLPGKRGDKGSPGVKGAPG
PIGLKGLSGSKGEKGDRGSPGVKGERGGVLQIQGPRGYKGSKGQPGERGSPGFDGDKGEK
GEDGPPGVKGVKGNAGIKGAMGRFGARGPVGQKGDPGDPGVNGVMGRNGADGLDGAKGDK
GDNGLQGQQGNQGDPGEPGLPGEKGEKGEKGFRGFPGRTGSLGLNGEKGDMGLPGTPGIP
GLNGVTGRKGDKGEGGINGVDGDPGVKGEKGAAGFPGFPGFKGSAGSPGRDGDMGPPGPP
GPQGDKGPKGDRGKRGRSKKCQSGAPGTPGHRGENGKVGIEGAKGEKGEPGLSAEEVKEL
VNQEVVEKCGLEYKFMVKSVDPDATTAVTKNENDQKDVVKSITHDLHEQSMEENMADNMG
EGHPQNQTDTHDGGTVEWGQRKKRRVYGRNTANRCLEPMSEGACSDYSLVWYFHARSGEC
RPFVYGGCGGNQNRFSSRHECEEWCEAESRVMGGPIRSRRE
NT seq
7686 nt
NT seq
+upstream
nt +downstream
nt
atgggtcactcttctgtgtgcatctttctactgtccctttatctgactcatcaaagtgtt
gcagcgcacgctgaagcatgcaggacagtggttcaggccgacatagtgtttctggtggat
gagtcctggagcgtgggtcataaagacttttccagaatcaaagacttcatctcagccatc
atctcctcctttcaggacaatgtggtcggagctgatggggtccgttttggagtcactgtc
tttggggatgttccaaggatgcggattgctttgacagactacaattcccttgaggaggta
ctcagagccatcaaagaccttccctatgaaggtggatccaggaggactggcatggcactc
cagtttctggtcgactctgttttcagccccgtcatcaggcgggattctgtcccgaagatt
gctgttttgatcacaaatggacagtcggacgaccaggtcagtgctgcagtcagagcagta
gcagacaatggaattactgtctttgcagtaggcctcacgggggttgatgaggcagagctt
aggagggttgtgtcggagccacatgccgagcatctattgccggtcactgatttctctacc
atggacaccatcctccccaaactgtcccgcagagtgtgcctcactgcctctgaaccccca
cgtcctgtgaaaacttcccagcctagcgaggaacgtgtggtgggtcccagagaccttcag
gttagcgaactggcccacagttctcttagactgacgtggagccaggccacgggtgatgtc
accggatatcgcctcctggtcactccactgagctcggagggacaactccttcctgtgcag
cagaggcagatggatctgaaggcagatgtgagcacagccatggtgacagagctgagtccc
aaaaccgactattccctcaccgtctatgccatgtacccaggcctcataggagactctgcg
acaatcaaagtaaagacaacgcctttgcccgaagtttcaaacttccgtgttattgaggag
ggcctgttctccctgcgcctcggctggacacccccccaggggaagctaaatggattcaag
atcttcatcccgagatccaacagaccaggattcatttatgagcagctgcttcccagagac
atttcctctcatgtgattgacagtctggaggaggataagaagtacactgtcagtatttat
gctgtgtaccctgaaggaccaagtaaaccggtttcagtagtggggaagacattgaagttg
gtgccagttcatcagtttctggtccaaaatgccaccacagacaccgttcaagcaaggtgg
gcatcagttaaaggtgctacaggataccgtttgacatgggcatctacagaaggccacata
gaaaacataaacctcggggacaattttaacttctacatgatacagggcctccacacaggc
tctgagtacaccatcaccatcaaccccatctttggagacattgaggggcctatcaccact
gcgaaaatcaagacattggaaagtagttcagtacagactctgaaagtatctgctgtgagc
acaagtactgcagtcgtctcatggaacagtgtcccgggggctacaggatacagactggca
tggagacccaccccagagtttgttggtcgggatcgtcccagacaattggctctgaacacc
agcactacacagtaccagctgaaaaatgtagcccatgatacggagtatgtcctgacgctt
tacgtgctgtttggcgctgcggttggacctggcatcgctgccaccttcagaacttctcct
ttgggttatgtctctaacttcaaggtgacatcctacacaagcaccactatagatgtggcg
tggagtcccatcgttggagccaccgagtacaaactctcatggaaaacagataatagcaaa
ccccaagtccagtacctggatcgtagcatcctcttccatcgtctcaaagacctgaatcca
cagtctacctacacagtcaccatctgtgcagtgtatggcaactcagagggaccagaaatc
tccttatctcagctcacagctgcagtgtcagagtcagatccaatccagccagtgagggag
gtgaaggttgaggacattggagtaaattccttcacactatcttggaaaaaagcatcaggg
gcttctggatacaaaatctcttggatcccatttcttgggggtgatgagaagtcccatgtg
gtatcggctgattttgcctcctacaccatccgcaacctgcgagagagctcagcttacaag
atccaggtgtcctccatggtgggcagcagggaaggaagcgctgtcctggtcacagcacgt
accttggatcttcccaaagtagaaggatttgttgctttgaatacaacagataacagtact
gttctgaactggacacgcgtagctggtgcctcaggatatcgcctctcctggaggcacatc
tcagtgtttgacacaaaaacagaaatccttggccctggattcacctactataagatcagt
gatctcttgtatggcagaacatatcttttcaccatcagacctttgtatggagaagtggag
gggcctataagcaccatgtatcagagaatattgggaccagctcgcccagcgttaacagtc
cagcctgtgccacctacagtgcccccccattccccacctaacactggggactcccagact
gcctctatcatcaacacaaccactgctcaatcacccatgaggaccacctggcaccctgat
gttgtgcttccaactgagtccttaacaaccaagaagccccacgttcagccaagtgtcact
gagggcaaggcaggagcagtcacgtcctttcgattaaccacactgagtagagtgacagag
aaaaaaacaccaccacaaccagtgtgcggtaagaccaaagcggatatagtgttcttggtg
gatgagtcgtcgagcattggcactgacaactttaggaagatgaaagacttcatatttcga
gtggctacatacttccctgtaattggttcacagggcacgcagatagctgtggttcattac
agcgatgagcctcgcgttgaattccgccttaatgacttcaaagacagaaactctgtgctc
agggctctcagagcgctgcgttatggagggggcaacaccaaaaccggaaaaggcatcagc
tatgttctgcaagaactgttccaggaggctcatgggatgaggcaggatgtaccccatgtt
ctggttttgtttacagatggcaaggcccaagacaatgtggtgccaccctccagaattgcc
cgcgccttgggggtcagcgtcctggcagttggagtttcgaatgcagatcgtgaagaactg
aataaaattgcagctcccaccagctacaaaaacatcttctattcaccaacttttgatgat
tttccctccgtggagagagaatttatcagaagcctctgtagcgacgaactcatcacagag
ttcaaactacaagatgagggtgctcagctagacacccccactgatgacccagaggagatg
cttaagcccgagggtccatgcctaactcagtgcatgaagggccaaaaaggggaaaaggga
gacagtttgggtcttggtctgagattcagacaaagccctggagagtttgatcctttcaca
tcttcaaaaggagaaaaaggagaaaggggacttcctggaactgacggtgttcctggtttg
ccaggtcgcccaggaagaactggaccaccgggttctgctggccaacggggccctacaggt
gttccaggtgacatgggtccacctgggctccctggtccaaagggacagagaggagagaga
ggagagccgggatacgtcatagctggtacagatgcaaattttgtgcccggacgaaaagga
gagccaggctcctcaggtcccccaggacctcccagtcttccaggggtcaatggagctcca
ggtctgcctggtcagccaggatcaccggggccaccaggaatagctgtcaagggagatccc
ggcgagccgggtacaaaaggcttacgtgggaagcagggcgtgaaaggagacaaaggagag
ccgggaaaagatggcattgcaggtttgcctggtcccattggtgttgatgggggaccagga
ctgccaggccagaaaggagaaaagggtgaggagggagttggcatacaaggtgttcaaggt
cctcatggagagaaaggagagaagggagatattggattagcaggaccagttggcccaaag
ggtgagcgtggagagcagggcatccagggaatcattggacctcgggggaaaaaaggaatg
aaaggggagccaggagacaagggagaccaaggagaggtgggaccaataggaccacaagga
cccccagggcctgcaggaccgatgggattaaagggagatgaaggtccaagaggacctgct
ggagacccggcgaagggtgtaattggtccagctgggaaaaagggggccaggggggacatc
ggtccagttggttctacaggccctcagggaataaagggagaacaaggagacaagggagaa
aagggtagtcctggttttgggattccaggacagcaggggcaaaagggagaaaatggagaa
aggggaaatgttggtttatcaggaaaaccaggacaaaaggggaaagatggctctaaaggt
gaaaaagggagcattggattacctggcaatcctggagaaccgggattaagaggtaaagat
ggtgcacctggagctatagtagaaccgggaatgaagggtgaacaaggaccagctggagag
cctggtgaaagaggaatcaggggtccattgggattaccaggaaaaccaggtgacactgga
gaaaaaggtgaccctggcaagcctggcccacctggtgccgatggcagaaaaggtgacaaa
ggagaggtgggcgatcctggagagccaggtcagccaggtttgcgaggagaaatgggcccg
cctgggccacaaggtatgcatgagtttgctcacaaggtgtcttatggtaaccgtagggtg
accagggacagaaaggagagcctggtccgaaaggagaaaaaggagatcaaggccgggttg
ggattgctgggatgcctggcttaccggggactcctgggagacctggcattgatgggaaga
ggggcctgccaggaaaagatggagaaagaggactcaaaggagatgacgggggacaaggga
gatgcgggtgctgatggtaaagatggtagtaagggtgaaccagggcttccaggtttgcct
gggaggcaggtgcttgtcactcctgagggtgctaccattgatgaaatccgacaagcattc
ccaatgccaatgggtcctccaggacctactggttctccaggattgaagggtgataaagga
gaaaaaggcctgaaaggagaaaagggtgacgctggagctccaggaaaatctcttgagatg
aaggacattgagacaatgtttgaagcctacggtataaaggctttgattgacaggttgctg
caggatggcatagaggagctgcttcatgtgctcagcaactccaagaaaacaaaagaaaac
acagaaaggcacaactccaacgtcatcactgactacaaaagttcggagaaatttgacatc
accagcagacctttgtcaaaagcggacacttttgaggacactgatgtagacggccagcct
cctgaatctttctttgttacaagtgaagaggccaggcaagacgaagaagacgagttttat
aacggcgaggattacagttatgaatacgaggttatcttgccaaccacagagtcaccctct
cgaccctctgatgatatagagaagtctacacctccttcggcaacagaagaaccagatcag
ggcgaaattggtgaaaagggacagaagggggagccgggcatcggtcacagagggccagag
ggtcaggctggtcctcctggacagaagggtgagcccggcgagccaggtcctccaggtgct
cagggcattcagggaatccctggcaatccaagcatccagggccccacaggtcttaggggt
cttccaggggacccaggagaggcaggtagagagggcagccgaggtaaaagagggaagaat
ggctccccaggatctcctggacctcgaggaccgccaggacctcatggtattcctggcata
cctggagaaaaaggagaaaagggtgacagtataccaggtgaacctggtgagagaggcgta
gttggcctcccaggtaaaaggggtgacaagggctctccaggtgttaaaggagctcctggg
cccataggtcttaaaggactgagtgggagcaaaggtgaaaagggagatcgtggatcacct
ggagtcaaaggagaaaggggcggtgtgcttcaaatccaaggacctcgtggctataagggt
tccaaaggacagccaggtgagcgaggttcacctggttttgacggggataaaggagaaaaa
ggcgaggacggtcctcctggggtcaagggtgtaaaaggtaatgcgggtataaaaggtgca
atgggaagatttggagcacggggcccggtaggacaaaaaggagatccaggagatcctgga
gtcaatggagtgatgggtcgcaatggggctgatgggctggatggagccaaaggggataaa
ggagacaatggactccaaggacaacagggtaatcagggtgatccaggagaacctggctta
ccaggagaaaaaggggagaaaggggagaagggtttcagaggttttcctgggcgcactggg
agccttggcctgaatggagaaaagggagatatggggctacctggcaccccgggcatacct
ggactgaatggggtcacgggacgcaagggggacaagggagaaggggggatcaatggtgtt
gatggtgatcctggagtaaaaggggaaaagggtgcagcaggtttcccaggtttcccaggt
ttcaaggggtcagcaggaagtccaggaagggacggtgatatgggaccaccgggaccgcca
gggcctcaaggagacaaagggcctaagggggacaggggtaaaagaggcagatcaaagaag
tgtcagagtggagcaccagggacaccaggacacagaggagaaaatggtaaagttggtatt
gaaggagcaaaaggggagaaaggagagcctggactctcagctgaagaagtgaaggagcta
gtcaaccaggaggtggtagaaaagtgcggattggaatacaagttcatggtaaaatctgtt
gacccagatgcaacaactgcagtgactaagaatgaaaatgaccaaaaagacgttgtgaaa
tctatcacccatgacctgcatgaacaaagtatggaagaaaacatggcagacaacatggga
gaagggcacccacaaaaccagactgatactcatgatggagggactgtggagtggggacaa
aggaagaagagaagggtatatggaagaaacacagcaaaccgctgcctggagccgatgtca
gaaggagcctgttcagactattctctggtctggtacttccacgcccgatcgggggaatgc
agaccgtttgtttacgggggctgtggtggcaaccaaaacagattctcctccagacatgag
tgcgaggaatggtgtgaggcggagagtcgagttatggggggaccaatcagatcgcgcagg
gaataa
DBGET
integrated database retrieval system
