Maylandia zebra (zebra mbuna): 101480701
Help
Entry
101480701 CDS
T02814
Name
(RefSeq) roundabout homolog 1 isoform X1
KO
K06753
roundabout, axon guidance receptor 1
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
101480701
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mze04515
]
101480701
Cell adhesion molecules [BR:
mze04515
]
Immunoglobulin superfamily
ROBO family
101480701
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
C2-set_2
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
Ig_5
C2-set_3
Unc5_NetrinR_N
Ig_PDGFR_d4
Ig_J_second
Motif
Other DBs
NCBI-GeneID:
101480701
NCBI-ProteinID:
XP_076745123
LinkDB
All DBs
Position
LG10:9496624..9581017
Genome browser
AA seq
1559 aa
AA seq
DB search
MPAYLTGVYLLLVFLNISSGSRLRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPPPT
VEWYKDGERVETDRENPRSHRMLLPSGSLFFLRIVHGRRSKPDDGSYVCVARNYLGQAIS
HNASLEVAILRDEFRQNPVDVMVAVGEPAVLECQPPRGHPEPTISWRKDGSNLDDRDERI
TIRSGKLMITNTRKSDAGKYICVGTNMVGERESEIAELTVLERPTFVKRPSSVVVLAEES
VEFSCVVQGDPVPTVRWRRDDSDLPKGRFEILEDHTLIVRQVTSADEGSYTCVVENMVGK
SEASATLTVHVNTVPPAFAIRPRNQVVAVGRTVTFQCEATGNPQPAIFWQREGSESLLFS
YQPPQPFSRLSVSQMGSLTITNVQRNDGGFYSCQALNIAGSVITKALLEVTDSGSDHPPP
VIRQGPVNQTVSVDSTVTLGCQSVGTPTPAIHWKKDGVVVSPVDSRMSLTETGLLKIHYA
KLGDTGFYTCVASNSNGEASRTAYLQVEEFGVVVQSGHPSDPSLIPSAPSKPEVTDISRT
SVTVSWKSGPSGTAPPTSYLIEAFSYTLGSRWVTLAEHVKAQTFVLRNLKPGTVYLFMVR
AVNSYGLSDPSPISDSIRTQDSTATMQGVDHRHIQRELADVVIHLRTPTVLSSSAVRVQW
TVEQQSPYIQGYKVLYRASAEHGQPDGQWIVQELRAPLEDGVVISQLKKGSIYEFKVRPF
FDEFQGTDSEVKVVRTLEEAPSRAPQGVTVTKTEANGTAILVSWKPPPNAEEAGLIQEYK
IWCLGNESRYHVNQSVDGSTFSVLISSLAPGIRYSVVVAASNGAGPGVQSDVAFFQLDSA
GQMMDISEERDTLSQISDVVKQPAFIAGIGATCWLVLMIFSVWLYRHRKKRSGLSSTYTG
IRKVPSFTFTPTVAYQRGESVCSAGRPGLLSMGEPLNQLWLPDSWPNACANHKDCSINCC
NNGNGTSDSNMTTYSRPADCIANYGNHPENKQEGQLGSETAIYTDVNLSNKLNEIKTFNN
SNLCYASPGGDSAATYEPIPYATTQLIQASIKNKAASGGSIAEPLDIPCWKQPPNLPPIP
KEMAAQMQYNLTEQKSNDHLQGGEGMIHPKAIPYNQTRDHSTGGSHHSSDRGSNSTSGSQ
NQKKGIRVPKIPKHNAVSWGEALSPPHANAWDCDEYSLPMERSFNPEERTEGCPTPPVRG
PVSSSTEVSYNHPPITPSQGDLTNGLHNPAEHLSQHVTSNPRPLSPTHTYSSIPLCVGTD
GQEENDEDLEEETDTELTESHYSQDHNHEKHKHQLHHQSPHKQLLHGLDQTPASSTGDLD
RSVTGSMVNSWGSASEDNISSGRSSVVSTSEGSFFTDGDFNQAVASSRDIVGLRMCRYPE
ESGRRQQRPSSPMSTDSNMSPAITHKRPRRHKQNQSAPQGYQPKDVFSDDTCMPLDFTSQ
MSHGDYKVRGATLPRMGPGEARGRRGSTGTHRVKEATVEERESQENHKIPLAGKGSSKSR
QHSEFGDILLYSRPSFPSGQTQTVPNESNSSKFASSGDSRTKQGGQVAPLGQVEEFLKS
NT seq
4680 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcttatctcacaggagtttaccttctgctggtatttctaaacatttcttcaggg
tctcgtcttcgccaggaagacttccctccccgcattgtggaacacccttctgacctcatt
gtgtccaaaggggagccagccactctcaactgtaaggcagagggccgtccgccgcctacg
gtggaatggtacaaagatggggagcgtgttgagacggatcgggaaaatccccgttcccac
cgtatgctgcttcccagtgggtccctcttcttcctgcgtatcgtccatggacgacggagc
aagccagacgatggcagctacgtgtgtgtggcccgaaactatctgggccaggcgatcagt
cacaatgcttctctggaagtagccatcttacgtgacgaatttaggcagaatcctgttgac
gttatggttgcagtgggtgagcctgcggtcctggagtgccagccaccccgtggacacccc
gagcccacaatctcctggaggaaagatggctccaacttagatgacagagatgaacgcata
acaattcggagtggcaaactaatgatcaccaacactaggaagagtgatgcagggaaatac
atctgcgttggaaccaacatggtgggagagagggagagtgagattgccgaactcacggtg
cttgagcgtccgacctttgtgaagcggcccagcagtgtagtggtgctggcagaggagagt
gtggagttcagctgtgttgtccaaggagaccctgttcccactgtccgctggaggagagat
gattctgacctgcctaagggcagatttgaaatcctagaggaccataccttgattgttcgc
caagtgacctctgcagacgaaggctcttatacatgtgtggtggagaacatggttgggaag
tctgaagcgtctgccacgctcactgtacatgtcaatactgtgcccccggcttttgccatt
cgtcccaggaaccaggtggtggcagtgggcaggacggtcaccttccaatgtgaggctact
ggcaacccgcagcctgctattttctggcagagggagggcagtgagagtcttctcttctcc
taccagccaccgcagccctttagccggctgtccgtctcccagatgggcagtttgaccatt
accaatgttcaacgtaatgatggcggcttttatagctgccaggctcttaacatcgctggc
agcgttattaccaaagcgctgctggaggttacagactctgggtcagaccaccctcctcct
gtcattagacagggtccggtcaatcagactgtttctgtagacagcacagtaaccctgggt
tgccaaagtgttggcactccaacacctgccattcactggaagaaagatggtgtggtggtg
tctcctgtggactcccgtatgtctctaacagaaacaggattgctgaagattcactatgct
aagctgggagatacaggtttctacacctgcgttgcttctaattccaatggagaggcttcc
cgaacagcgtacttgcaagttgaagagtttggagttgttgtccagtctggtcatccctca
gaccctagcctgattcccagtgctccatctaaacctgaggtgactgacatcagccgtacc
tctgtcactgtttcatggaaatctggccccagtggcactgcaccacccacctcttacctg
attgaggcattcagttacacattaggcagcagatgggtgaccctggcagagcatgtgaag
gcgcagacctttgtcctgagaaacctgaagcctggaactgtatacctctttatggtcaga
gcagtgaattcctatggcctgagtgaccccagtccaatctctgactccatcagaacacag
gacagcactgccactatgcagggagtggatcatcgtcacatccagagagaactggcagat
gttgttatccacctgcgcacgccaactgtcctttcgtcttccgctgtcagagtgcagtgg
acggtcgaacagcagtccccgtacatccagggttacaaggttctctacagggcgtctgct
gagcatggccaaccagacgggcagtggattgtccaggagttacgtgccccacttgaggat
ggggtggtgatcagtcagctgaagaagggatccatctacgagttcaaagtgcgtcccttc
tttgacgagttccagggaactgacagtgaggtgaaggtggtcaggacactggaagaagcc
ccaagtagagcaccccagggagtgacagtcacaaagactgaggccaatggcactgccatt
ctcgtttcctggaaacctcctccaaatgcagaagaggctggactcattcaggaatacaag
atctggtgcctgggtaatgagagtcgctaccatgtaaaccagtcagtggatggctccacc
ttctccgtgctcatttccagtctggcaccggggattcgctacagtgtggtggttgcagct
agcaatggtgctggacctggagtacagagtgacgttgctttctttcagttagactctgca
ggccagatgatggatatcagcgaggaaagagacacattgtcccagatctcagatgtggtg
aagcagcccgcatttatcgctggcattggcgccacctgctggttggttctcatgattttc
agcgtgtggctgtaccgtcaccgcaagaaaagaagcggcctcagcagcacatacactggc
atccgcaaggttccctcattcacctttacacctacagttgcatatcaaagaggagaatca
gtatgcagtgctggcagacctggccttctcagcatgggtgaacctctaaaccagctgtgg
ctgccagacagttggccaaatgcatgtgccaatcataaggactgtagcatcaactgctgc
aataatggcaatggcactagtgacagtaacatgacaacatacagccgaccagccgactgc
atagccaactatggaaaccacccagaaaacaaacaggagggacagcttgggtctgagaca
gccatatacactgatgtgaatctctccaacaaactcaatgagattaaaacattcaacaac
tccaacttgtgctatgcaagtccaggaggggattcagcagccacatatgagcctattcca
tatgccaccacacagctcattcaggccagcattaagaataaggcagcctctggcggctca
atagcagagcctctggatataccctgctggaaacagccccccaatttgcctccaatacca
aaggagatggcagcacagatgcaatacaacttgactgaacaaaaaagtaatgatcatttg
caaggaggagaaggaatgattcatcctaaagctatcccctacaaccagacccgagatcac
agcacaggtggctcacaccacagttcagacagaggcagcaacagcacctcagggagtcaa
aatcaaaagaagggaatacgggtcccaaagatcccaaaacataatgcagtaagctgggga
gaagccctatctcctcctcatgctaatgcctgggactgtgatgaatatagccttcccatg
gaaagaagttttaatccagaagagagaactgaaggctgtccaactccaccagttagaggg
ccagtctcatcctctactgaagtatcttataatcacccacctatcacaccatcacaggga
gacctgactaatggcctacacaatccagcagaacatctcagtcaacacgtcacaagcaac
cctcgccctctttccccaacacatacctacagctcaataccgctctgcgtgggtactgat
ggacaggaagagaatgatgaagatttggaggaggaaacagatacagagctcactgaaagt
cattacagccaagaccacaaccacgagaagcacaaacaccagttgcaccaccagtcccca
cacaagcagctgctgcatggactggaccagaccccggcctccagcactggagatctggac
agatcagtcacagggtctatggttaacagctggggctcagcatctgaggacaacatctca
tcaggcaggtccagtgtggtcagcacttcagaaggatccttctttacagatggagatttc
aaccaggcagtagcctcatcgcgggatattgttggcctgcgcatgtgcagatacccagag
gagtcagggcggcgacagcagcgacccagcagtcccatgtccacagatagcaacatgagt
cctgcaataacacataaaaggcccaggcgccataaacagaaccaatctgctccacagggt
taccaacccaaagacgtcttcagtgatgacacttgtatgcctctggatttcaccagccag
atgtcccatggtgactataaagtgaggggggccacgctgcctcggatgggccctggggag
gcccggggtagacgaggcagcactgggactcacagggtcaaagaggctacagttgaggaa
agagagagccaggagaatcacaagattccattagcaggaaaagggagcagcaaaagccga
cagcactctgaatttggggacattcttctgtacagtcgtccctctttcccatcaggacaa
actcagacagtgccaaatgagtctaattcatccaaatttgcatcatctggagactcaagg
actaaacagggtggacaggtggcacctttgggacaggtggaagagttcctgaaaagctaa
DBGET
integrated database retrieval system