Maylandia zebra (zebra mbuna): 101481085
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Entry
101481085 CDS
T02814
Name
(RefSeq) PDZ domain-containing RING finger protein 4
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
mze
Maylandia zebra (zebra mbuna)
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mze04121
]
101481085
Enzymes [BR:
mze01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101481085
Ubiquitin system [BR:
mze04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
101481085
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
GRASP55_65
Tricorn_PDZ
Motif
Other DBs
NCBI-GeneID:
101481085
NCBI-ProteinID:
XP_004560929
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Position
LG17:complement(27768639..27813057)
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AA seq
813 aa
AA seq
DB search
MGCNLCTLQKREEHYKLLYEIAQVNGLAKVEHDEAVVEAIRRDPIVVQVLRRTPTRAAAA
VVQNGTSSPQDVCVVDVCTQTDITFEHIMALAKLRPATPPVPDICPFLLSDSCHSIHTME
HEFYECPEYLSNTTADVERIVEYEYEEVELCRQNSQEKLGLTLCYRTDDEEDTGIYVSQV
EPNSIAAKDGRIKEGDRILQINGCEVQDREKAVALLSSEEARSITLLVTRPEIQLDEEAG
WLDDEQQELMEEILEERRKQKEHGFDRGDENQAEEGMTTDTATCSSNNQDSGFGRSTDSP
EHQPLLAKLQRRSPAHCLRERWRAEHPHTKRGAVVPRENQSTRTLSTGQGHEGVGSVRNS
GGGILGLENRFQQLLELKCQIRNGGECGVYSIRHSIECSLTEQGGEDADCVDDIGGGVEQ
ELRMLNEELRSIELECQSIMQAHQLRQSHQQEHSQPSPCSPGRSTKDGHKRHSRLADIHE
HPERLEADKMREKDSSSAYNTAESARSTPLGMERSPDHSLQRHISITNQKNLRLASSTPS
SPIPIPKPQGTSSRSRQADPGPVISSSPDQSNPSRSESDPALPADDERCEKKGRTRESRR
GLPYASSYHTTPYHGQGGSKQLQSYMQLLQQHSSVEYSQSQLSLLSVCRDPVHRNGRPGE
PRLEWKVKVRADGTRYVARRPARDRILRERALRIREERSGGMTTDDDAMSEMKMGRYWSK
EERKQHLARAREQRKRREFMQKSRLECLKEGPLSGAEGRKEINILELSHKKMMKKRNKKI
LDNWMTIQELMSHGARVPEGSKVHNAFLSVTTV
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcaatttgtgcaccttgcagaaacgggaggaacactacaaactgctctacgag
atcgcacaggtaaatggtttggccaaggtcgaacatgatgaagcagtggtggaggccatc
aggcgagaccctatcgttgtccaggttctccgacgtacccccaccagagccgcggcggct
gtcgtacaaaacggcaccagctcgccgcaggacgtgtgtgtggtcgatgtgtgcacgcaa
acagacatcacctttgaacatattatggcactggccaagcttcggcctgctaccccacca
gtccctgacatttgtcccttcctgctgtctgacagctgtcactcaatccacactatggaa
catgagttttatgaatgtccagagtacctgtctaacaccacagcagatgtggagaggatc
gtagagtatgagtatgaggaagtggagctatgcaggcagaacagccaagaaaagctgggc
ctgacactgtgctacaggactgatgatgaggaggacactgggatctatgtgagccaggtt
gagccgaacagcatagcggcaaaagacgggcgcataaaggaaggagatcgtattctgcag
ataaatggctgtgaagtacaagacagagagaaggctgttgccctgttgtcaagtgaagaa
gcaaggagcatcacactactggtgacaaggccagaaatccagttagatgaggaggctgga
tggctggacgatgagcaacaggagctcatggaggagatcctcgaggagaggaggaagcag
aaggaacatggctttgacaggggagatgagaatcaagctgaagaagggatgacaacagac
acagctacatgttcttccaacaatcaagacagtgggtttggacgcagtacggacagtccg
gagcaccaaccactgctggctaaactccaaagaaggagcccagctcattgcctaagggag
cggtggcgggcagagcatccccacaccaagcgaggagctgttgtcccacgggaaaaccag
agcacgagaacactgtccacaggccaaggccacgaaggggtagggagtgttcgcaatagt
ggaggtgggatcttaggtttggagaatcgcttccagcaactcttggagctcaagtgtcag
atccgaaacgggggtgagtgtggggtgtactcaattcgacacagtatagagtgtagcctt
actgaacaagggggagaggatgccgattgcgtagatgacatagggggaggggtggagcag
gagttgaggatgctaaacgaggaactgcgcagcattgagctcgaatgccagagcattatg
caggcccatcagcttcgccagtcccatcagcaggagcactcacagccgtcgccctgttca
ccaggaaggagcaccaaagatggacacaagcggcacagcaggctggctgacattcacgaa
cacccagagaggttggaagccgataagatgcgcgagaaggatagctccagtgcctacaac
acagcagaaagtgcacgctcaacaccactgggtatggagagatctcctgaccactctctg
cagagacacatcagcattaccaaccagaaaaacctcagactggcttcttcaacaccctca
agccctattcctatccccaagccccagggcacatctagtcgtagcagacaagcagatcca
ggtcctgtaatctcaagcagccctgatcagagcaacccttccaggtctgagtcggaccct
gctctgcctgcagatgatgagaggtgtgagaagaaagggaggaccagagagtcaaggaga
gggcttccttatgcttcttcatatcacacgaccccttatcatggccagggaggatctaag
caacttcagagctacatgcaactgctacagcagcattcatccgtggagtattcgcagagc
cagctgagtctcctcagtgtctgccgagatcccgtgcaccgtaacggacgccctggggaa
ccacgactagagtggaaggtcaaagttcgagctgacgggacgcgatacgttgcccggagg
cctgctcgtgatcgcatactgagggagagggcgctaaggatcagagaggagaggagtgga
ggcatgaccacagatgatgacgccatgagtgagatgaagatgggccgctactggagcaaa
gaggagaggaagcagcacctggcacgtgccagggagcaaagaaagaggagggagtttatg
caaaagagccgcctggagtgtttaaaggagggaccactgagtggagctgaaggcaggaag
gagatcaatatcttggagctcagtcacaaaaagatgatgaagaaacgaaataaaaagatc
ctggataactggatgactattcaggagctgatgagccatggggccagagtcccagagggc
tccaaagtccataatgcctttctttctgtcacaactgtgtaa
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integrated database retrieval system
