Maylandia zebra (zebra mbuna): 101481258
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Entry
101481258 CDS
T02814
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze03030
DNA replication
mze03420
Nucleotide excision repair
mze03430
Mismatch repair
mze03440
Homologous recombination
mze03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
101481258
03420 Nucleotide excision repair
101481258
03430 Mismatch repair
101481258
03440 Homologous recombination
101481258
03460 Fanconi anemia pathway
101481258
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mze03000
]
101481258
03032 DNA replication proteins [BR:
mze03032
]
101481258
03400 DNA repair and recombination proteins [BR:
mze03400
]
101481258
Transcription factors [BR:
mze03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
101481258
DNA replication proteins [BR:
mze03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
101481258
DNA repair and recombination proteins [BR:
mze03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
101481258
MMR (mismatch excision repair)
101481258
DSBR (double strand breaks repair)
HR (homologous recombination)
101481258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
CATSPERD-E_C
IBR
Motif
Other DBs
NCBI-GeneID:
101481258
NCBI-ProteinID:
XP_004550211
UniProt:
A0A3P9DFJ5
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All DBs
Position
LG10:16968587..17015824
Genome browser
AA seq
640 aa
AA seq
DB search
MNVPLTKGAVEALCKGLDVDKPVLQLLNIRQISNASSPPRFRLMMSDGQHSLTSCLLATQ
LNYLSEENLLVPNCVCLLKKTINNTLADGRRVVVVMDMDILKSAKETGGKIGNPTPYNTD
GKTSSPQKVSSSTYVPESPPSAAVPGPSYRNYSSPRGRGGSFTGKTPMKASPMKASAIKA
SPSKGLTMKVSPMKASPMKANSASPGSSAKVNPIASLNPYQSKWTIRARVTNKSSIRTWS
NSRGEGKLFSFEIVDESGEIRITAFNKEVDKFFSLVEQGKVYYISKATLKPANKQYTTLK
NDYEMTLHAYSSIVPCDDNQSIPTVHCDFVPIAELENRDKDAIIDVIGICKSAEDVSRIT
TKNSREVSKRALSIIDETGKVVTVTLWGEEAENFDGSTQPVVAIKGARLSDFGGRSLSAL
FSSTVMVNPDIPQAFRLRAWYDREGFAVNSQSLTETRSAGTGLNMNWKTLSDIKNEDMGH
GEKAQYFSCVATVLYIRKENCLYQACPSADCNKKVIDQQNGLYRCEKCNKEFPNFKYRLL
LSANLADFGDNQWVTCFQETAEALLGHSAETLGHLRDTDEAAFDEVFQKANFTTHIFKNR
VKLETYNDESRVKVTVMEVQPVDHREYSRRLLQNIYKLAR
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtacctcttacaaaaggggcggttgaagccctgtgcaaaggcttagatgtggac
aagcccgtgctgcagctgctgaacatccgtcagatcagtaatgcctcaagcccacccagg
ttccgacttatgatgagtgatggccagcactctctgacttcttgcctgcttgctacccag
ttaaactatttatctgaagagaacctcctggtaccaaactgtgtgtgtttgttgaaaaag
accatcaacaacactttggctgatggcaggcgtgtggttgttgttatggacatggatata
ttaaagtcagcaaaggaaactggggggaagattggaaatcccactccttataatacagat
ggtaagacttcatctccacagaaggtgtcatcaagtacctatgttccagagtcccctccg
tctgctgccgtgcctggaccctcctataggaactacagctctcccagaggcagaggagga
agttttacgggaaaaacacccatgaaagcttctcccatgaaggcctcagctattaaagca
tcacccagtaagggcttaactatgaaggtttcacccatgaaagcttcgcccatgaaggcc
aacagcgcttctccaggttcttcagcaaaagtgaatcctattgcaagcctcaacccctac
caaagcaagtggactatcagagccagagtcaccaacaagtcgagcattcgcacgtggagt
aactccagaggagagggcaagctcttctcctttgaaatagtggatgagagtggtgaaatc
aggatcactgctttcaacaaggaagtggacaagtttttctctctagtggagcaaggcaag
gtgtactacatctccaaggctacactcaagccggccaacaaacagtacaccacgctgaag
aacgactatgagatgaccctccacgcttactcatccatcgtgccatgtgatgacaatcag
agcatccccacagtgcactgtgactttgtgcccatcgcagagctggaaaatcgagacaaa
gatgctatcattgatgtgattggaatatgtaagagtgctgaggatgtatcccgtatcacc
actaagaacagcagagaagtctccaagagggctctcagcataatcgacgaaacaggcaaa
gtcgtgacagtcacactgtggggcgaagaggcagaaaattttgatggctctacacagcca
gtggttgccatcaaaggagctcgattgtctgattttgggggaagatctctctctgcattg
ttcagttcaacagtcatggtcaacccagatataccacaggcctttagactgagagcctgg
tatgaccgggaaggctttgcagtcaacagccagtcgctgacagagaccaggtcagcaggc
acaggattaaacatgaactggaaaacactgagcgacattaagaatgaagacatgggccat
ggagagaaggcacagtatttcagctgcgtggcgacagtgctgtacattcgtaaggagaat
tgtctgtaccaagcttgtccatctgcagactgcaacaagaaggtcatcgaccagcagaac
gggctgtaccgctgcgaaaagtgtaacaaagagttccccaactttaaatacaggctctta
ctttctgccaacttagctgacttcggggataaccagtgggtgacgtgcttccaggagaca
gctgaggccctgttgggtcacagcgcagaaactctcggacatctcagagacacagatgaa
gctgccttcgatgaagtcttccagaaagccaacttcacaactcacatctttaaaaacaga
gtcaagctagagacctacaacgatgagagtcgagtgaaggtaactgtaatggaagtccag
ccggtcgaccacagagaatacagccggagactcctgcaaaacatctacaaattggctaga
tga
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