Maylandia zebra (zebra mbuna): 101481286
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Entry
101481286 CDS
T02814
Symbol
herc4
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101481286 (herc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mze04121
]
101481286 (herc4)
Enzymes [BR:
mze01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
101481286 (herc4)
Ubiquitin system [BR:
mze04121
]
Ubiquitin ligases (E3)
HECT type E3
101481286 (herc4)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
QSregVF_b
Dicer_platform
Motif
Other DBs
NCBI-GeneID:
101481286
NCBI-ProteinID:
XP_004559709
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Position
LG13:24297471..24315747
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AA seq
1083 aa
AA seq
DB search
MKRGICDYTLEGYISPSVFFTEPEILLLRAAKGRTTMLCWGNASYGQLGLGGIDEEIVVE
PRKCEFFHGKQVSDVGCGRRHTAFLLEDGTVYTCGCNDLGQLGHEKARKKPEQVVALDAQ
IIVAVSCGEAHTLALNDKGQVFSWGLGSDGQLGLNNFEECVRVPRNIKTLSDVQIAQVAC
GYWHSHALSKGGHIFSWGQNRYGQLGLGINGQSISTPQMIQSLQGIPFAQISAGGAHSFA
LTPSGAVFGWGRNNFGQLGLNDCNDRYFPALLKSLRSQRVIYICCGEDHTAALTKEGGVF
TFGAGGYGQLGHNSTNHEINPRKVFELMGNVVTQIACGRQHTLAFTPSSGKMDSFGLGGN
GQLGTRSTSNRKSPALVKGPWVVASTATDTDSEENCCVKRIYAGGDQSFAHYCSTNSLQN
GDDTRIQDPQRKIYSLNEDLIQKWLNHSQGRLPLDISNEIDLVFSSASCLNGSFLSMSHP
DHYSTSSKCSGVDMNMARLLFNKVIQEGHPEIAQQIAASLEKNLIPRLNNSPPDIEALRL
YLTLPECPLFTNRNNYVTISIPFAKSVISLKEAPLKVLGNWWSTFESPVFQRLVELYKEV
VVYLLQMHKVGIPAVEQRIFTCFLDTSLRLLEILHKVSEKAGHIIQYGKFYIHELDNLID
IRNDYVTWLQRQMYPMGHDGVVTLCKYPFVFDAQAKTTLLQTDAVLQMQMAVDQAQMQNF
SSMFLPAVESVNPCLILIVRRENIVGDTMEVLRKSKNVDYKKPLKVIFVGEEAVDAGGVR
KEFFLLIMKELLDPKYGMFRYYEESRLIWFSNKTFEDIDLFNLIGVICGLAIYNLTIVEL
NFPLALYKKLLKKKPTLEDLKELMPDVGRSLQQLLDYTEDDLEETFCLNFTITEENYGAT
EVLELVPNGENINVNMSNRQDFVSAYVDYVFNTSVAPLFECFYSGFHKVCGGKVLELFQP
NELQAMVIGNTNYDWMELEKTTEYKGEYWTDHPTIRLFWEVFHNLPLEKKKQFLLFLTGS
DRIPILGMKSLKLVIQPTGGGEHYLPVAHTCFNLLDLPKYTSLEMLREKLLQAIDHNQGF
NLA
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgggggatatgtgactatactctggaaggttatattagcccaagtgtcttcttc
acagagcctgagatcctgcttttgcgtgcagctaaagggagaactacaatgctgtgctgg
ggaaatgcttcctatggacaactgggcttgggtgggattgatgaagagattgtggttgag
ccacgaaaatgtgaattctttcacgggaagcaagtgagtgatgtggggtgtggccgcaga
cacacagctttcctgctggaggacgggacggtgtatacctgtggctgcaatgatcttggg
cagcttggacatgagaaagccagaaagaaacccgagcaagttgtggccttggatgcacag
atcatagtggctgtatcatgtggagaggcccatacactcgccctaaatgacaaaggacag
gttttctcgtggggtcttggttcagatggacagctgggattaaataactttgaagaatgt
gttcgcgtgcctagaaacatcaagactttgtcagatgttcaaattgctcaggtagcctgt
gggtactggcactcccatgcactttcaaaggggggccacatcttctcatggggccagaat
cgatatggccaacttgggttaggaatcaacggacagagcatttccacaccccagatgatt
cagtctctgcagggcattccttttgctcaaatatcagcaggtggagcacatagctttgcc
ctcactccctcgggagctgtgttcggttgggggcgcaacaatttcggtcagcttggtctc
aacgactgcaacgatcggtatttcccggccctcctgaagtccctcagatcacagagagtg
atttacatttgctgtggagaagatcacacggctgcactgaccaaggaagggggcgtgttc
acatttggagcaggaggatatggacagcttgggcataactctacaaatcatgaaataaac
cccagaaaagtgtttgagctcatgggaaatgtagtcacacagattgcatgtggaaggcaa
cacacgctggctttcacgccgtcatcggggaagatggattcatttgggctcggagggaac
gggcagcttggcacacggtccacttccaacagaaaaagccctgctcttgttaaaggtccc
tgggtagtcgccagcactgcaacagatacagattcagaggagaactgttgtgtcaaacgg
atttatgctggaggagatcaaagctttgctcactattgcagtaccaacagccttcagaac
ggagatgacacaaggatacaagatccccagagaaagatttactccttgaatgaggatctc
atacaaaaatggttgaaccactcacaaggaagactcccgctcgacatctccaatgagatc
gacctcgtgttctcctcagcaagctgcctaaatgggtctttcctgtcaatgagtcatcca
gatcactacagtaccagcagtaaatgttcaggggtggatatgaacatggctcgcctgctc
ttcaacaaagtaatccaagagggtcaccctgagattgctcagcagattgctgctagtctg
gagaagaacctcattcccaggctaaacaattctcctccagacatcgaagccctgagactc
tacctcactcttccagaatgccctctcttcactaaccgaaataactacgtcaccatctct
atcccatttgccaaatcagtcatcagcctaaaagaggctccactgaaggtactaggaaac
tggtggtctacgtttgagtccccagtcttccagcggctagttgaactgtacaaggaagtg
gtggtgtatctgctgcagatgcacaaggtgggcattcccgcagtagagcagagaattttc
acctgttttctggacacgtcgctgcgactcctggaaatcctacacaaggtgagcgagaaa
gcgggacacatcattcagtatggcaagttctacattcatgagttggacaacctgatagac
atccgaaatgactatgtcacatggcttcagaggcagatgtacccaatgggacatgatggt
gtggtgactctgtgcaagtatccctttgtatttgatgcccaagcaaagactacactcctt
cagacagatgctgtcttacaaatgcagatggcagtggaccaggcacagatgcaaaatttc
agctccatgttcctaccggctgtggaatccgtcaacccgtgcctcatcctcatcgttcgc
agggaaaacattgttggagacactatggaagtgctcaggaagtctaagaatgttgactat
aagaagccactaaaggtgatctttgtgggagaagaggctgtcgatgcaggcggcgtgaga
aaggagttcttccttctgatcatgaaagagctgcttgatcccaaatacggaatgtttcgt
tactacgaggagtctcgcctcatctggttttcaaacaagacatttgaggacattgacttg
ttcaacctcatcggggtcatctgcggtctggccatctacaatctcaccatcgttgagctc
aacttccccttggccctttacaagaagcttctgaagaagaagccaacgctagaagacctg
aaagagctaatgccagatgtgggaaggagtctgcagcagctactagactacacagaagat
gaccttgaggaaaccttctgcttgaatttcacaatcacagaggaaaactacggtgccaca
gaggttttggagcttgtaccaaatggggaaaacattaacgtcaatatgtcaaacaggcaa
gatttcgtcagtgcctatgtagactatgttttcaacacatcggtagctccactcttcgag
tgcttctattcaggcttccacaaagtgtgcggtgggaaagttttagaactcttccagcca
aacgaactgcaagccatggttatcggcaataccaactatgactggatggagcttgaaaag
actactgagtacaaaggggagtactggacagaccaccctacaatcaggcttttctgggag
gtgtttcacaatcttccattggagaagaaaaaacagtttctcttgttcctcactggaagt
gaccgcatccccatcttgggcatgaaaagcttgaaactggtgatccagcctactggtgga
ggggagcattacttacctgtcgcccacacctgcttcaacctgctggacctgcccaagtac
acgagtctagaaatgctccgtgagaagctgctacaggctatagatcacaatcaaggcttc
aatcttgcctga
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