Maylandia zebra (zebra mbuna): 101481304
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Entry
101481304 CDS
T02814
Name
(RefSeq) short transient receptor potential channel 2 isoform X1
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
mze
Maylandia zebra (zebra mbuna)
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mze04040
]
101481304
Ion channels [BR:
mze04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
101481304
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
PKD_channel
Ank_2
Motif
Other DBs
NCBI-GeneID:
101481304
NCBI-ProteinID:
XP_004563925
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All DBs
Position
LG10:11089093..11097977
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AA seq
1032 aa
AA seq
DB search
MEKLTPEQWREIMSKKMRFSPALISAIQEGETALLCGLLKTGDGITRQLDESEDRQWREA
LNLSIRLGNEDAMDALLQGVKFDFRQIHEALLVAVDTNQPIVVKRLLDRLDQEKGNKMDV
RSFSQAIFDRSVDNSQFAPGVTPLTLACQKDLYEIVTMLTQKGHVIPWPHKISCACLECS
NGRQYDLLKFSLSRINTYRGIASRAYLSITSDDAMLSAFSLSRELRKLSQKEPEFKPQYL
SLEQICQEFAVELLGMCRNQSEVTTILNSCGNETQDSLDEQAFEEGIPSLSRLRLAVNYN
QKQFVAHPICQQVLSSIWCGKLAGWRGSRTAWKLFVSMGIFLTMPLLCLAYWIAPKSKLG
KLVRIPVIKFLLHSASYLWFLITLLGESITMELYQDTFASRQQNLLHSSFHMVWVVGFFW
YECKEVWIEGLRSYFLDWWNCLDVMVLSMYLASFALRVLILLKGFFLCHDHDGTEECVYF
TQTSRDNWHQEDPQLIAEVLFAVTSMLSFTRLAYILPAHESLGTLQISIGKMIDDMMRFM
FILMIIGTAFLCGINNIYVPYVISPNLGRFNETFRFLFWTMFGVVNQEYVDMPEFVLAEF
VGRVLYGIFTLVIVIVLLNMLIAMITNSFQKIEDDADVEWKFARSKLYLSYFREGLTMPV
PFNIIPSPKAIFYILRGIFRRICCCCTCSSEQKYPPIASISSDKGSEDGQLSYRQQVITA
LVQRYIESARREFEETKRKDIGNRMTELSKAVARMHNDLKVAQQYAMDDGNDTSDAPTKN
GSSVLGKYIIGAKNNFRGFTTRQDDKCTDLKVTVHSIEEKLDKEKFEAQMESDIQQNEVD
ECRDEGQFPDSVVVKMEEGRAQAEQEEKKEINSDEKEKAAKGEISVNKVKEEKEGGNGFT
NTEETLSDEATDEEAETLNEGGMNKEGRVPDEHMTSAHAESIEVSDEKIETQKIICKFNH
IELQEKKAAQPSWMKGRKPEHNVAETPHNEKSNEKPEMKKMIPSPTGSSSSQDMGFGSQE
GEESIDGTPVRP
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaactaacgccagagcaatggcgagagattatgagcaagaagatgcggttctct
ccagcgctcatcagtgccattcaggagggggaaacagcgctgctgtgtggactcttgaag
acaggtgacggcattacccgtcagctggatgagtctgaggatcgtcagtggagggaggcc
ctcaacctctccatccgcttgggcaacgaggatgccatggacgccctcctgcaaggagtc
aagtttgacttccggcagattcatgaggctctgctagtcgccgtggacaccaaccaaccc
atagtggtgaagcgtctcctggaccgcttggatcaggagaaagggaacaagatggacgta
cgatccttctctcaggccatatttgatcgttctgttgacaactctcagtttgcccctggt
gtgacccctctgactttagcctgccagaaagacctgtacgagattgttaccatgctcacc
cagaaaggccacgtcatcccgtggccacataagatctcctgcgcctgtttggagtgttct
aacggccggcagtatgacctgctgaagttctccctgtctcgcatcaatacttatcgtggc
attgccagccgtgcctacctgtccatcacctctgacgatgccatgctcagcgccttcagt
ctcagcagagaactccgtaagctgtcacagaaagagccagagttcaagcctcagtacctg
agcctggagcagatctgtcaggagtttgccgtggagttgctgggcatgtgtcgcaaccag
agcgaggtaaccactattttgaacagctgtggaaatgaaactcaggattccttggatgaa
caggcctttgaggaaggaatccccagcctgtctcgcctgcggcttgcagtcaattacaac
cagaagcagtttgtggcgcacccaatctgtcagcaggttctgtcctctatctggtgtggg
aaactggcaggctggagaggtagcagaacggcctggaagctgtttgtctctatgggaatc
tttcttaccatgccccttctttgccttgcctactggattgcaccaaagtcaaagctggga
aagctagtaagaattcctgtgatcaagtttcttcttcactctgcatcctacctgtggttt
ctcattacattacttggggaatcgataaccatggagctatatcaggacacatttgcttcc
cggcagcagaaccttctgcacagctccttccacatggtgtgggtggtcggattcttctgg
tatgagtgtaaggaagtgtggatcgaggggcttcggagttacttcctagactggtggaac
tgcttggacgtgatggtgctcagcatgtacctggcatcttttgcgttacgtgtgcttatc
ttgctcaaaggtttcttcctctgccatgatcatgatggcacagaggagtgtgtctacttc
acccagacttcacgtgacaattggcaccaggaagatcctcagctgattgccgaggtcctc
tttgcagtgaccagcatgttaagcttcacacggctggcatatatcctgccagcccacgaa
tctctgggaacactacagatctccattggaaagatgattgatgatatgatgagatttatg
ttcatactgatgatcattggcaccgccttcctttgtggcatcaacaatatctatgttcct
tatgtcatttctccaaatcttggcaggtttaatgagaccttccgcttcctattctggacc
atgtttggagttgtaaaccaggaatatgtggacatgccagagtttgtgttggcagaattt
gtaggaagggtcctgtatggcatcttcactcttgtcattgtcattgtacttctcaacatg
cttattgccatgataacaaactcctttcagaaaattgaggatgacgcggacgttgagtgg
aaatttgccaggtcaaagctgtacctcagctacttcagagagggcctcactatgcctgtg
cctttcaacatcatcccctcccccaaagccattttttacatcctaaggggcatctttaga
cgaatctgctgctgctgcacttgttcctctgagcaaaaatatccccccatagcctctata
tccagtgataagggatctgaagatggccagttatcgtaccgtcagcaggtgatcacggca
ctggtgcagcgctacattgagtcagctcgcagggagtttgaggagaccaagaggaaagat
attggaaatcgaatgactgagctgagcaaagcggtcgccaggatgcacaacgatctgaaa
gtcgcccagcagtacgcaatggacgatggaaacgatacaagcgatgcaccgaccaagaat
ggctcctctgtactggggaaatacatcattggtgccaagaacaatttcagaggttttacc
accagacaagatgacaaatgcacagatcttaaggtgactgtgcacagcattgaggaaaag
ctggataaagaaaagtttgaagcacagatggaatcagacattcaacagaatgaggtggat
gaatgtagagacgagggacagtttcctgactctgttgtggtgaaaatggaggaaggccga
gctcaggctgaacaagaggaaaagaaggaaattaactcagatgagaaggagaaagcagcc
aaaggtgaaattagtgtaaataaagtgaaagaggagaaggaaggaggaaacggttttact
aacacagaagaaacgttgagtgacgaggccacggatgaagaggcagaaaccctaaatgaa
ggagggatgaacaaggagggaagagtgccggatgaacacatgacctctgcacatgccgag
agcatcgaagtgagtgacgaaaagatagaaacccaaaaaataatctgcaagttcaatcac
attgagctgcaagaaaaaaaagcagcacaaccgagctggatgaagggaagaaagcctgag
cataatgtagcagagacgcctcacaatgagaagagcaatgaaaaacctgaaatgaagaaa
atgattccttcacctacaggaagcagcagctcccaggacatgggctttggttcccaagaa
ggggaagaatcgatcgatggcacaccagtgagaccttaa
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