Maylandia zebra (zebra mbuna): 101481640
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Entry
101481640 CDS
T02814
Name
(RefSeq) transcription factor Sox-1a
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
mze
Maylandia zebra (zebra mbuna)
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mze03000
]
101481640
Transcription factors [BR:
mze03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
101481640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
101481640
NCBI-ProteinID:
XP_004551317
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Position
LG16:complement(12797023..12809650)
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AA seq
287 aa
AA seq
DB search
MYSMMMETDLHSPGPQTNTTTGQTGPNSGSKANQERVKRPMNAFMVWSRGQRRKMAQENP
KMHNSEISKRLGAEWKLMSEAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDK
YSLAGGLLSGPSGGGGVGLGVGMGSSGVGQRLESPGGHGGSASSGYAHMNGWANGAYSGQ
VAAAAAAAAMMQEAQLAYSQHPGSGAHHHHHSHHHHSHNPQPMHRYDMTALQYSPISNSQ
SYMNASPSGYGGITYTQHQSSGVSSSAAMGTLGSLVKSEPSISPLLE
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgtatagcatgatgatggaaactgaccttcattcccccggcccccaaacgaacacgacg
acggggcaaacggggccgaatagcgggtcgaaagcgaatcaggagcgggtgaagagacct
atgaacgcgttcatggtgtggtcccgtgggcagcggagaaagatggcgcaggagaacccc
aaaatgcacaactctgaaattagcaagcggctgggcgccgagtggaagctgatgtccgag
gctgaaaagcgtccattcatcgacgaggctaaacggttgcgagccatgcacatgaaggag
catccggattacaagtaccgaccaagacggaagaccaagacattgctgaaaaaggacaaa
tattcccttgctggtggacttctttctgggccgagcggtggcggtggagttggtttaggg
gttggcatgggttcatccggggtcgggcagaggttggagagccccggaggtcacggaggt
tccgccagctccggctacgcgcacatgaacggctgggcgaacggtgcgtactcggggcag
gtggctgctgccgcggcggccgcagcgatgatgcaggaggctcagctagcctacagccag
cacccggggagcggagcgcaccaccaccaccactcacaccaccatcattcacacaacccc
cagcccatgcaccgctatgacatgacagccctgcagtacagccccatctcgaactctcag
agctacatgaacgcttccccatccggctacggcgggatcacctacacgcagcaccagagc
tccggcgtctcttcctcagctgccatggggacattagggtcgctggtgaagtcggagccg
agtatttcaccgttgctggaatag
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