Maylandia zebra (zebra mbuna): 101482237
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Entry
101482237 CDS
T02814
Symbol
rora
Name
(RefSeq) nuclear receptor ROR-alpha isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
mze
Maylandia zebra (zebra mbuna)
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mze03000
]
101482237 (rora)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
mze03310
]
101482237 (rora)
Transcription factors [BR:
mze03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
101482237 (rora)
Nuclear receptors [BR:
mze03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
101482237 (rora)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
101482237
NCBI-ProteinID:
XP_004553200
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Position
LG7:12579858..12767991
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AA seq
519 aa
AA seq
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MESPPDPASDPGNSASEPATPVRETPVNLETLRKADHPAPVRRQTCSSTNRGISVTKKTH
TSQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNAAYSCPRQKNCLIDRTSRNR
CQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRLQQQQRDHQQQPGEAEPLTP
SYGLSASGLTELHDDLSGYMDGHTPDGSKPDSAVSSFYLDIQPSPDQSGLDINGIKPEPI
CDFAPGSGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHMETCQYLREELQQMTWQAFL
QEEVESYQNKPREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVV
FVRMCRAFDTQNNTVYFDGKYAGPDVFKSLGCDDLISSVFEFGKNLCSMHLSEDEIALFS
AFVLMSADRSWLQEKVKVEKLQQKIQLALQHVLQKNHREDGILTKLICKVSTLRALCSRH
TEKLTAFKAIYPDIVRAHFPPLYKELFGSDFEQSIPLDG
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggagtcccctccagatccagcgagcgacccgggcaacagcgcctcggagccggctacc
ccggtcagggaaaccccggtaaacctggagacgctccggaaagcggaccatccagccccg
gttcgaaggcagacctgttccagcaccaacagaggtatctcagtaacaaagaagacacat
acttctcaaatcgaaataattccctgcaagatctgtggagacaaatcatcaggcatccat
tacggcgtgataacatgtgaaggctgtaagggctttttcaggaggagtcagcagagcaat
gcagcttactcctgtccccgtcagaagaactgcttgatcgaccgcacaagccgcaaccgc
tgccagcactgccggctgcagaagtgcctggcagtgggcatgtcacgagatgcagtgaag
tttggtcggatgtcaaagaagcagcgagacagcctatacgctgaggtccagaagcaccgg
ctgcagcagcagcaacgtgaccaccaacaacagcctggggaggcggagccactcacacct
agctacggcctctctgccagtggcctcacggagcttcacgatgacctcagcggctacatg
gatggtcatactcctgatggcagcaaaccagactcggctgtcagcagcttctacctggac
attcagccatctcctgaccagtcaggcctggacatcaacggcatcaagccggagcccatc
tgcgactttgccccaggctctggcttcttcccctactgctccttcaccaatggagaaacc
tcccccaccgtgtccatggctgaactagaacacctggcccagaacatttctaagtcacac
atggagacatgtcagtatctgagagaggagctgcagcagatgacctggcaggctttcctg
caagaggaggtggagagctaccagaacaagccccgggaagtcatgtggcagctgtgcgct
atcaaaataacagaggccattcagtatgtggtggagtttgccaagcgcatcgacggcttc
atggagctgtgtcagaacgatcagatagtgctgctgaaagcaggctctctggaagttgtg
tttgtcagaatgtgccgtgcctttgacacgcaaaacaacacagtgtattttgatggaaaa
tatgctggacctgatgtgttcaagtcattaggctgtgacgacttgatcagctccgtcttc
gagtttgggaaaaacttgtgttctatgcacctgtctgaggatgagatcgccctgttctcc
gcctttgtgttgatgtctgctgaccggtcctggctgcaggagaaggtgaaggtggaaaaa
ctccagcagaagatccaactggccctccagcacgtcctgcagaagaaccacagagaggac
ggtatacttacaaagttgatatgcaaagtgtcgacactgcgggcgctgtgcagtaggcat
acagagaagcttacagctttcaaagcaatatacccagacattgtgcgtgcccacttcccc
ccgttatacaaggagctgtttggatcagactttgagcagtccattccccttgacgggtag
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