Maylandia zebra (zebra mbuna): 101482248
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Entry
101482248 CDS
T02814
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1 isoform X2
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101482248
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mze04121
]
101482248
Enzymes [BR:
mze01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101482248
Ubiquitin system [BR:
mze04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
101482248
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
zf-B_box
fn3
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
zf-RING_2
PRY
zf-C3HC4_3
Pur_ac_phosph_N
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
101482248
NCBI-ProteinID:
XP_004557887
LinkDB
All DBs
Position
LG16:16207077..16233639
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AA seq
669 aa
AA seq
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METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCTPSEPIQSISAFQCPTCR
YVITLNQRGLEGLKRNVTLQNIIDRYQKASLSGPNSPNETRRERAVPDSTAMTSPCNRVQ
CQFCEQDPPQDAVKTCVTCEVSYCEECLKATHPNKKPFTGHRLIEPLLDSHLRGLMCLEH
EDEKVNMYCVTDEQLICALCKLVGRHRDHQVAALSDRYDKLKQALDSNLSNLIKRTSELE
SLMGKLIQTCQHVEVNASRQENKLQEECDLLINIIQQRRQIIATKIKEGKSVRLRKLAQQ
IAGCKQCIERSSSLITQADQTLKETDHARFLQTAKSICERVSMATASSQILLPEINLNDT
FDTFALDFTREKKMLESLDYLTAPNPPVIREELCTASYDTITVHWTSDDEFSVVSYELQY
AIFTSQSNVVSLCKSADSWMIVPNIKQNHYTVHGLQCGTKYIFIVKAINQAGTRSSEPGK
LKTNSQPFKLEPKSAHRKLRVSHDNLTVERDETSSKKSHSQDRFSSHSSYGVTGNVYIDS
GRHYWEALIGGSTWFAVGIAYKSAPKHEWVGKNSASWVMSRCNNSWVVRHNSKEIPIEPS
PHLRRLGVLLDYDSGSLSFYDAVGSQHLYTFDIDFAQPVCPVFNVWNRCLTILSGLPIPD
HLEGTDYNN
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgctggagtctgagttgacctgcccaatctgtctggagcttttcgaggaccca
ctgctgttaccctgcgctcacagtctttgtttcaattgcgcccaccgaatcctggtctcc
cactgcacccccagcgagccaattcagtccatcagcgcctttcagtgccccacctgtcgc
tatgtcatcaccctcaatcagaggggcttagagggactcaaacgcaacgtcactctgcag
aatatcatcgaccgctaccagaaagcttctttaagtggacccaactctcctaacgagact
cggcgtgagcgagccgtccctgacagcacagccatgacgtccccctgcaaccgggtccag
tgtcagttctgcgaacaggaccctccacaggatgccgtgaagacttgcgtcacctgcgag
gtgtcatactgcgaggagtgtctcaaggccacccatccaaataaaaagcctttcacggga
caccgtctaatcgagcccttgcttgactcacatctacgagggcttatgtgtctggagcac
gaggacgagaaggtcaacatgtactgtgtgacggacgagcagctgatctgcgcattgtgt
aagctagttggccgacaccgagaccaccaagtcgcagccctcagtgaccgatatgacaaa
ctcaagcaagccttggattccaacctcagcaatctaataaagaggaccagtgagttggaa
agtctgatgggcaaacttatccaaacctgccaacatgtggaggtaaatgcatcgcgacaa
gaaaacaagctgcaggaagagtgtgacctgctgattaatatcatacagcagcgaagacaa
atcatagctaccaagataaaggagggcaagtctgtgaggctgaggaagctagcccagcag
atagccggctgcaagcagtgcattgagaggtcctcctcgctcatcacccaggctgaccaa
accctcaaggagacagaccacgctcgctttcttcagacagctaaaagtatctgcgagaga
gtgtctatggcaacagcatcctcccaaatcctgttaccagaaattaacctgaatgacaca
tttgatacttttgctttggacttcacaagggagaagaaaatgctagaaagcttagattac
ctcacagcgccaaatccaccagtaatccgcgaggaactctgtacagcttcatatgacacg
atcacggttcactggacatcagatgatgaattctctgttgtatcatacgagctacagtat
gccatcttcaccagccaatctaatgttgtcagtttgtgtaaatctgctgatagctggatg
atagtaccaaacatcaagcaaaatcactacacggtgcacggactccagtgtggcaccaag
tacattttcatagtgaaagcaataaaccaggctggaacccgcagcagtgaaccagggaaa
ctcaagacaaacagtcagccattcaaactggaaccaaagtctgctcaccggaagctgagg
gtgtcccatgacaacctgacagtagagagggatgagacatcgtccaagaagagccatagt
caggaccgcttctccagccacagcagctacggtgtcacgggaaatgtctacatcgacagt
gggcgccattactgggaggctctgattgggggaagcacatggtttgcagtaggaattgcg
tacaagtcagcgccgaaacacgagtgggtcggcaaaaactcagcctcctgggtaatgtct
cgctgcaacaactcatgggtggtgcgtcacaacagtaaagagattcccatcgagccctct
ccccacttgcggcgtctcggggtgttgttggactatgattctggatctctgtctttttat
gacgctgttggttctcagcacttgtatacgtttgacattgactttgctcagccagtctgc
cctgtgttcaatgtttggaacagatgcctaacaatcctgagtggactgcctatccccgat
cacttagagggaacagactacaataactga
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