KEGG   Maylandia zebra (zebra mbuna): 101482422
Entry
101482422         CDS       T02814                                 
Symbol
col4a1
Name
(RefSeq) collagen alpha-1(IV) chain
  KO
K06237  collagen type IV alpha
Organism
mze  Maylandia zebra (zebra mbuna)
Pathway
mze04510  Focal adhesion
mze04512  ECM-receptor interaction
mze04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:mze00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    101482422 (col4a1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    101482422 (col4a1)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    101482422 (col4a1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mze04147]
    101482422 (col4a1)
   00536 Glycosaminoglycan binding proteins [BR:mze00536]
    101482422 (col4a1)
Exosome [BR:mze04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   101482422 (col4a1)
Glycosaminoglycan binding proteins [BR:mze00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   101482422 (col4a1)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 101482422
NCBI-ProteinID: XP_004551415
LinkDB
Position
LG16:14205978..14253755
AA seq 1636 aa
MLLPSGSLLMLAALYLCVDLTEAEGCGASCGKCDCSGVKGAKGELGYPGSQGNMGFPGTQ
GPEGPPGPMGPKGDVGEFGAPGLKGVRGPTGLPGFPGNPGLPGINGHDGPPGAPGIPGCN
GTKGERGRDGTSGFPGPQGIPGIPGLPGMKGDPGGLMGIVPMKGEKGYPGTPGRPGQTGN
PGPIGPTGPPGYEGPRGDPGPPGPPGPMGDKLAFEGEKGEKGDKGLQGPPGPPGPTSFEQ
KGSQTVVRGPQGFKGEAGEKGDKGFCIPYQHGVKGDIGPDGPPGKPGKDGDNGLQGERGF
PGGPGYPGLQGEKGERGPPGEGVGPRGAPGSPGSKGEKGFPGPRGEPGLTGRHIEGPRGE
KGDKGEVGEKGDRGVEGEPLVGPPGQPGNPGPPGPPGPPINPGECNIQKGNRGLPGPPGL
QGEVGQKGDKGDTCVQCEGTVTPGLRGPPGPKGDTGPPGVVGGKGQKGIPGQPGQPGQPG
AQGNPGLRGAPGAVGEPGDIFVAPGLKGDKGLPGRNGLPGRPGLDGIPGRDGPTGFPGLK
GEPAREGIKGERGPDGDPGPIGPLGERGPPGLPGFGRPGQTGDKGSQGNPGVPGQPGRPG
TKGEPGKGVSTPGPQGVPGPRGEPGREGPIGDKGLPGDEGLPGFPGEKGEQGPPGIGFPG
PTGPKGSSGIPGAPGLPGEPGRSGKDGTTGSPGPRGPKGEPGRGLPGPKGSQGHQGIPGF
QGEKGSIGYPGVPGREGHAGPPGPQGLKGDVGPPGLPGLVGKSGPPGKGLPGPPGLQGPP
GEPGPHGGEGVKGEKGYPGPPGLDMPGPQGEKGNLGFPGVPGTKGLPGPAGLPGRDGLIG
NQGVKGEMGLMGTPGIPGYPGPPGTPGSTGPRGDPGLTGPRGDIGEPGLKGDRGEPGVQG
PPGNMSDVDMEHMKGVKGDKGDIGSPGTSGVRGIPGLPGDPGMPGKDGEPGLPGKPGDKG
DSGEPGEPGGMGPPGPKGGAGEMGVPGPSGPKGVKGDLGTPGHPGFRGTDGEKGDTGLPG
EPGIGVPGFPGQKGQTGGPGSPGQAGDKGQKGQEGMPGKPGLPGPKGEQGSPGYQGQSGR
PGDKGTPGLPGFVGEPGQDGRPGEVGRQGSSGQKGDKGDSGLDGIPGSTGERGQPGMAGI
GFPGPPGELGSKGDKGSPGFPGNPGIPGVPGVKGDKGFSGPQGPQGQPGEQGPSGFSLEG
PKGDRGETGQPGEAGIKGQPGPAGFPGRDGQKGEKGDQGLQGFQGESGIKGDSGLPGLPG
APGLPGLDGPKGEIGLQGVTGFPGQKGVGGDFGYRGEAGDRGFPGEKGNEGPPGPPGPQM
FIKGDIGFPGIQGLPGPQGPSGLPGQKGDRGVTGFPGSKGEEGLPGYNGQNGVKGEPGFP
GPQGPRGHPGPPGPNGVPGPAGPPGPSSMDHGFLVTRHSQSVDIPLCPEGTSLIYDGYSL
LYVQGNERSHGQDLGTAGSCLKKFSPMPFLFCNINNVCNFASRNDYSYWLTSPEPMPMSM
APITGERIKPFISRCAVCEAPAMVIAVHSQTIMIPPCPEGWDSLWIGYSFVMHTSAGAEG
SGQALASPGSCLEEFRSAPFIECHGRGTCNYYANSYSFWLATIEDSEMFTKPVPATLKAG
SLRTHISRCQVCMKRT
NT seq 4911 nt   +upstreamnt  +downstreamnt
atgctgttaccgtccggctcgctcttaatgctggcggctctctacttgtgtgtggatctg
acagaagctgagggctgtggtgcatcatgtggaaaatgtgactgcagcggtgtgaaagga
gcaaagggtgagcttgggtatcctggttctcaaggtaatatgggattcccagggactcag
ggacctgaagggcctccagggccaatgggccccaagggagatgttggtgagttcggggct
cctggattgaaaggagtcagaggacctactggtctgccaggtttcccaggcaacccagga
cttccaggcatcaatggacacgatggtccacccggtgcgccaggtatcccaggatgcaat
gggacaaaaggagaaagaggaagagatggaacttcaggttttcctggtcctcaagggata
cctggaataccgggacttcctggaatgaagggtgaccctggtggtttgatgggaattgtt
cccatgaaaggagagaaaggatatcccggcacacctggccgacctggacaaactggcaac
cccggacctattgggcctacaggacctcctggctatgaaggacccagaggtgatcctggc
cctcccggccctcctggaccgatgggagataagctggcctttgagggtgagaaaggagaa
aagggggacaaaggacttcaaggcccacctggccctcctggaccaacatcattcgaacag
aaaggatcacaaacggttgttcgtgggccacaggggttcaaaggagaagcaggagagaaa
ggcgacaagggcttctgcatcccatatcagcatggagtcaaaggcgatatcggcccagat
ggaccaccgggtaaacctggcaaggatggagacaatgggctacagggagaaagaggcttt
cctggaggcccaggataccctggtttacagggcgaaaaaggagaaaggggaccacctggt
gagggtgttggccctcgtggcgctcctggttccccaggttcaaaaggagagaaaggtttt
cctggtcctcggggagagccgggtctaacaggcagacacattgaagggcctcgtggagag
aagggagacaaaggagaggtgggtgaaaagggagacagaggtgtggaaggagagcctctt
gtcggacctccaggacaaccggggaaccctggtcctcctggaccacccggaccaccaatc
aaccctggtgaatgtaacattcagaaggggaatcgtggcctacctggacctccagggtta
caaggggaagtgggacagaaaggtgacaaaggggatacgtgtgttcagtgtgaaggcact
gtcacacctggattacgtggtcctccaggtcctaaaggagacacaggacctcctggtgta
gtaggcggtaaaggacaaaagggtattcctggacaacctggacaacctggacaacctggt
gctcaaggaaatcctggattaagaggggctcctggtgctgttggtgaaccaggggacatt
tttgttgctcctggtctgaagggggacaagggtctgcctggtcgtaatggattacctgga
cggcccgggctggatggaataccaggaagagatggtcccacaggatttcctggcctgaaa
ggagaacctgccagagagggcatcaagggtgaacgtggaccagatggtgatcccggtcct
attggccctctaggagagaggggtccgcctggtctgccaggctttggccgaccaggacag
actggagataagggcagtcaggggaatccaggagttcctggacaacctggacgacctggt
acgaaaggtgagccagggaaaggtgtgagcactcctggtcctcagggcgtacccggacca
cgaggagaaccaggcagagagggacctataggtgacaaaggccttccaggagacgaaggg
ttgcctggttttccaggagaaaagggtgaacaaggacctcctgggattggatttccaggc
ccaactggccctaaaggaagcagtggaattccaggagcccccggattaccaggagaacca
ggaagatcaggaaaggatggcacaacaggatctcctggtccacgtggaccaaagggtgaa
cctggacggggacttccaggtcccaaaggttcacaaggccaccaaggaattcctggcttc
cagggagagaagggcagcattggataccctggtgttcctggacgagaaggacatgcaggc
ccacctggacctcagggtctcaaaggtgatgtgggacctcctggacttccaggactggtt
ggcaaatccggtcctccaggaaaaggattgcctggacctcctggactacagggacctcct
ggagagcctggtcctcatggtggggaaggtgtaaagggggagaagggctacccaggtcct
cctggtctagacatgccagggcctcagggagagaaagggaaccttgggtttccaggagta
ccaggtactaaaggactgccagggcctgcaggtttaccaggcagggatggactcattgga
aaccaaggtgttaaaggtgaaatgggattaatgggaacacctggaataccgggatatcct
gggcctcccggtacacctggatctactggtccgagaggtgatcctggtcttactggacca
agaggtgatattggagagcctggactaaaaggtgacagaggagagccgggtgttcaggga
cctcctgggaacatgagtgatgttgacatggagcacatgaagggagtgaagggagacaaa
ggagacataggtagcccagggaccagtggagtgaggggcatacctggattgccaggagat
cctggaatgccagggaaagatggagagcctggattacctggaaaacctggtgacaaagga
gactctggcgaacctggagagcctggtggtatgggaccacctggaccgaagggtggtgca
ggggagatgggagtaccaggtccaagtggtccaaagggtgtcaaaggagatttaggtaca
cctggacatcctggattcagaggcacggatggagaaaagggagacacaggattacctggt
gagccgggtattggcgtcccaggatttccaggacaaaagggtcagactggcgggccagga
tccccaggacaagctggagataagggtcagaaaggccaagagggcatgcctggcaagcca
ggactgccaggacccaaaggagaacaaggcagtcctgggtatcaaggtcagtcaggtaga
ccaggggacaagggtacccctggacttcctgggtttgtaggagagcctggtcaagatggc
cggcctggcgaagttggccggcaggggtcttctggtcaaaagggagataaaggagattct
ggacttgatggaatcccagggtccacaggagagagaggacagccaggtatggctggaata
ggttttcctgggccgcctggcgagcttggcagcaaaggagacaaaggcagtcctggcttt
cctggcaacccaggtattccaggtgtccctggtgtgaaaggtgataagggattttccggc
ccacagggacctcaaggacagccaggagaacagggtccctcgggtttctctctagaagga
cctaaaggagataggggagaaacaggacaacctggagaagcaggaatcaaaggacaacca
ggacctgctggctttccaggcagagatggacagaagggagagaaaggagatcaaggtctc
cagggtttccagggagagtcgggaataaagggggattctggattacctggactgccggga
gcacctgggcttccaggtcttgatggaccgaagggagagataggattacagggtgtaact
ggcttcccaggacaaaagggtgttggtggagactttggatatagaggtgaagctggagac
agaggattcccaggcgaaaaaggtaacgaaggccctcctggtcctcccggccctcaaatg
ttcataaaaggagacattggcttcccaggaattcaaggtttaccgggacctcaggggcca
tctgggcttccagggcagaaaggagatagaggtgtgacaggttttccagggtcaaaaggc
gaagaaggtctccctggatataatggtcagaacggggtcaaaggagagcctggctttcca
gggccacaaggacctagaggacaccctggcccgcctggacctaatggtgttccaggccca
gccggtccacccggcccctcgtccatggatcacggtttccttgtaacacgtcacagccaa
tcggtggacatcccactgtgtcccgagggaacctctctcatatatgatggctactccttg
ctctacgtccagggcaatgagcgctctcatgggcaagacttaggtacggcaggcagctgt
ctaaaaaagttcagccccatgcccttcctcttctgtaatatcaacaatgtgtgtaacttt
gcctcccgtaatgattactcctactggctcacctcacctgagcccatgcccatgagcatg
gcacccatcactggtgaacgcattaaacccttcatcagtaggtgcgctgtatgtgaagct
ccagccatggtgatagcagttcacagtcagaccattatgatcccaccgtgccccgaaggc
tgggactctctgtggatcggctactcctttgttatgcacaccagtgctggtgctgagggt
tcgggccaggctttggcttctcccggttcctgtctggaggaattccgtagcgctccattc
atcgagtgtcacggtcgaggaacctgcaactattacgccaactcctacagcttctggctc
gctaccattgaagacagtgaaatgtttacgaaacccgtcccagcaacgctaaaagccggc
agcctccgaacacacataagccgctgtcaggtttgcatgaagaggacataa

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