Maylandia zebra (zebra mbuna): 101482650
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Entry
101482650 CDS
T02814
Symbol
katnb1
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
mze
Maylandia zebra (zebra mbuna)
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mze04812
]
101482650 (katnb1)
Cytoskeleton proteins [BR:
mze04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
101482650 (katnb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
Katanin_con80
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
EIF3I
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_SPT8
Beta-prop_SCAP
Beta-prop_Vps41
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
WD40_RFWD3
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_RIG_1st
RMC1_N
Beta-prop_IP5PC_F
Beta-prop_VPS8
Beta-prop_DCAF12
Beta-prop_WDR35_TULP_N
PROPPIN
Beta-prop_IFT140_2nd
Beta-prop_NWD2_C
VPS8_N
Ge1_WD40
Beta-prop_LRRK2
Cytochrom_D1
OYE-like_second_a-b
Motif
Other DBs
NCBI-GeneID:
101482650
NCBI-ProteinID:
XP_024659934
LinkDB
All DBs
Position
LG1:complement(4180480..4192602)
Genome browser
AA seq
700 aa
AA seq
DB search
MTSMAASSTTKIAWRLQEFEAQSSSISCLALGKSSGRLLATGGEDCRVNIWAVSKANCIM
SLTGHKNPVESIHFNVSEEQVAAGSQSGSIRVWDLEAAKILRTLMGHKANITSLGFHPFG
DFLASSSMDTNIKLWDLRRKGYVFRYKGHTQAVRSLAFSPDGKWLASASDDCTVKLWDLA
QGKTITEFKSHTAAVNIVQFHPNEYLLASGSSDRTIKLWDLEKFTMIGSLEGDTTPVRCI
CFSPDGSCLYSGATDSLRVFGWEPDRCFDAVPVSWGKVSDLAICNQQLIGVSHQLSSVSS
YVVDLKRVKKSGGAVIQGIIQDDQPLTEPKKDPKGAALRKNYERPTTTCRSQRLKHRSES
DRRSPEGERRSPSEDEADEKLSSAEIHNAEDYKAIFQPKSAISRTPPKMSEPFPAPPEDE
SILAISRQLKDIKSNFPDKQQGPPLAASTPVVRVEPTVISAVKRPSPPAAGTVSSSHPAP
TQPPVTAAKSKPQLKIISSARNEPIGLNVADFLPSSPNHRSGALSDEEALTQMKKGHETM
CVMLSSRLKNLQTVRGVWTRDGIKIALDTAVSMNDPSIVVDILNIINPQPSLWKLDVCMV
VLPQLDKLLQSKYESYIQTGCTSLKLVMKHFWTLISDTLKATPSVGVDITREERHQKCRV
CCEQLKNLSNIVKNKATQVGRHGSTFKELQLLMSPLDDSP
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgaccagtatggctgcctccagcacaaccaagatcgcatggcgccttcaggagttcgag
gctcaatccagctccatttcctgtctggctctggggaaaagctcgggccgcctgctggcc
acaggaggagaggactgcagggtcaacatctgggccgtcagcaaggccaactgcatcatg
agtctgactggtcacaagaacccagtggagtctatccatttcaacgtgtcggaggagcag
gtcgccgccgggtcgcagtcaggttcaatacgagtctgggacctggaggctgccaagatt
ttaaggactctgatgggacacaaagccaacatcaccagcctgggcttccatccctttgga
gacttcctggcctccagctccatggacacaaacattaagctgtgggacttgcggaggaaa
ggatacgtgttcagatataagggtcacactcaggctgtgaggagtttggccttcagtcct
gatgggaagtggttagcttcagcgagcgacgactgcaccgtcaagctgtgggacctggct
caggggaaaaccatcacggaattcaaatctcacaccgccgccgtcaacatcgtccagttc
caccccaacgagtacctgctggcctccggaagctccgacaggaccatcaagctgtgggat
ctggagaagtttacgatgatcggctcgttggagggcgacacgactccggtcaggtgtata
tgttttagcccagatggctcctgcctgtacagcggcgccacggactcgctgcgggtcttc
ggctgggaaccggaccgctgctttgacgcggtgccggtgagctggggaaaggtgtctgac
ctcgccatctgcaaccagcagctgatcggcgtgtctcatcagctgtcgagtgtgtcgtcc
tacgtggtcgatctgaagagggtaaagaagagcggtggcgccgtgatccaggggatcatc
caggacgaccagccgctcacagagccgaagaaggaccccaaaggagcggcactgcgaaag
aactacgagagacccacgaccacctgcagatcgcagaggttgaagcaccgttcagagtct
gacaggcggagccccgaaggggagaggcggagccctagcgaggacgaggcggacgagaag
ctgtcgtctgctgagatccacaacgccgaggactacaaggccatcttccagccaaagagc
gccatctctcgcactcctcctaagatgtcggagccttttcccgctcctccagaggacgag
tccattttggcgatcagccggcagctgaaggacatcaagtctaattttcctgataaacag
cagggtcctccgctggctgcctccactcccgtggtgagggtggagcctacggtcatttcc
gctgtgaagcgtccgtcccctccagctgcgggcacagtgtcctccagccaccccgctccc
acccagccccccgtcaccgcggccaaatccaaaccgcagctcaaaatcatctcgagcgcc
cggaacgagcccatcgggctgaacgtggccgacttcctgccctcttcacccaaccacaga
tctggagccctgagtgacgaggaggccctgacccagatgaagaagggtcacgagaccatg
tgtgtgatgctgagcagccgactgaagaacctgcagacggtccgaggggtgtggacccga
gacggcatcaagatcgctcttgacaccgccgtctccatgaatgatccgtccatagtcgtg
gacatcctgaacatcatcaacccccagccatctctgtggaagctggacgtgtgcatggtc
gtccttcctcagctcgacaaactgctgcagagcaagtacgagagctacatacagaccggc
tgcacgtctctgaaactcgtcatgaagcacttctggacgctgatctcggacactctaaag
gccacgccgtccgtcggggtcgacatcacacgagaggagcgacaccagaagtgccgagtg
tgctgcgagcagctgaagaacctgagcaacatcgtgaagaacaaggcgacgcaggtcggt
cgtcacggcagcaccttcaaagagctgcagctgctcatgtcgccgctcgacgactcgccc
tga
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