Maylandia zebra (zebra mbuna): 101483047
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Entry
101483047 CDS
T02814
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-20
KO
K16498
protocadherin delta 1
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
101483047
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mze01009
]
101483047
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mze04515
]
101483047
Protein phosphatases and associated proteins [BR:
mze01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
101483047
Cell adhesion molecules [BR:
mze04515
]
Cadherins
Protocadherins
101483047
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
101483047
NCBI-ProteinID:
XP_004541060
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Position
LG2:21345696..21348923
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AA seq
858 aa
AA seq
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MGHGTPDNMNCAGLLQKLLIVVHIRQIICSSLLFSVPEELEPDTLVGSLSKNFSPPYQLL
PHKYLRMDINTGNFYTTELKMDREAICPCREKSEECVTLYNAIVGPSKDLIQFSVIIEDI
NDNAPHFENNKIHLGVPEDTTVGTSFLLDTQALDSDTGPNGEVQYHLKGSDGAFGLKIEE
DSSLIMLVVERTLDRETRDLFQMQLVATDCGVDPLSVSADLIVTVTDVNDNCPAFSSDSP
HSVTIPGDSRKNTVVTQVRATDPDLGPNGDIVYSLSPKVSEQVKTLFSLNSLTGSISLTR
DLESDNSEELVLKVLASGHHCPPADTQVTISVLPKANQELTIKIGFIAEHQNQTMVLQEN
QHPTALAVLELEGDSIFKDLFLAIEGEVPFTLSPQNGKYLLSTSKPLDYEMDREHHISVV
ARVRSAEGSVIVPSRRVVTVLVADINDNAPYFVQPHYELQVEENNQPGMSLLQISASDLD
SGENGMVTYRLENYNPTMFSIDSVTGQLSLLVPLDREQQNVHRLTVFARDSGSPPLESMA
TVSIHVRDQNDNPPVFLTPHFIFFIPENVPTLSQVGKVEVKDPDKGENGTTELYVVNSSA
PFVVDNTQGMLRTTRNLDRETEDRYELYLLASDHGQTVALTSTARVTIFVEDINDNQPKV
ILPGSNSSCLTVSPGTLAGATVGKIYAIDEDSGLNSEITYSATAPELLQNRSPFQIDSRS
GNITLSQQLLHTDLGMHHLFIVVRDGGKPVPLYTTVWMNLLVNDSTEPCHLDRVPTWTGT
LNLVQTPSKEPICDVETARFSKVILLIGLGMMLVSTCLFVATVICCLKQRSRSLKMNKRA
YTEANEIPLRLKDKYYSD
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgggccatgggactcctgataatatgaattgtgccggactactgcagaagctgctgatt
gtggttcacatcaggcagatcatatgtagttctctcctgttttccgtcccagaggaactg
gagcctgacactctggttggatcacttagtaaaaacttttctcctccatatcagctcctg
ccccacaagtacctgaggatggacataaacacggggaatttctataccactgagttaaag
atggatcgcgaggccatctgcccctgcagagaaaaaagcgaggaatgtgttactttatac
aatgccatcgtggggccctcaaaagaccttatacagttttctgtgatcatagaggacatc
aatgacaatgcgccgcattttgaaaataacaaaatacaccttggggtgcccgaggatacg
accgtggggaccagtttcctgctagatactcaggctctggacagtgacaccggtcctaat
ggagaggtgcagtaccacctaaaaggctctgatggagctttcggtttaaaaatcgaagaa
gacagctctttaattatgttggttgtagaaagaaccctggatagggaaactcgggacctg
tttcagatgcagctagtggccacagactgtggtgtagaccctttaagtgtgtctgcagat
ttaatagtcacagtgacagatgtcaacgacaactgtccagcctttagctctgatagccca
cacagtgtcaccatcccaggagactctcggaagaacacagtggtcactcaggttagagcc
acagatccagatttaggaccaaatggtgatatcgtttactccctcagtcccaaagtctct
gagcaggtcaagacgctctttagcctcaacagtctcaccgggtccatcagccttacacgg
gaccttgagagcgacaactcagaggagctcgtgttgaaagtgttagccagcggccatcac
tgccctccagcagacactcaggtaaccatatccgtgctccccaaggcgaaccaagagctg
acgatcaagatcgggttcatagcggagcatcaaaaccagactatggtgttacaagagaac
cagcaccccactgccttagccgttttagagctcgagggtgacagcatctttaaagactta
tttcttgccattgaaggtgaagtgcctttcactttgagcccacagaatggcaagtatctg
ctttccacatcaaagcccttagactatgagatggatcgtgaacatcatatttccgtggta
gcacgtgtgagatcagctgagggatctgtgatcgttccttctagacgtgtagtcacggtg
ctggtggcagacatcaacgacaatgcgccatattttgtacagcctcactacgaactccaa
gtggaagaaaacaatcagccaggaatgtcactgcttcagatctcggcttcagatttagac
agcggagaaaacggcatggtgacatacaggcttgaaaactacaatccaaccatgtttagc
attgattctgtaacaggtcaactctctctgctggttcctctagacagggagcaacagaat
gtacacagactcactgtgtttgctcgggacagcggctctcctcccttggaatccatggcc
actgtatccattcacgttcgtgaccagaatgacaatccacctgtttttcttacccctcac
ttcatctttttcattcctgagaatgttccaacattatcccaggtggggaaggtggaggtg
aaagacccagataaaggggagaatgggacaacagaattgtatgttgtaaacagcagtgca
ccttttgttgtggataacacccaggggatgctacgcaccactaggaacttggaccgcgag
acagaagaccgctatgaactctacctgctggccagtgatcacggccagacagttgctttg
acttccactgccagagtgaccatctttgtggaagacatcaatgacaaccagccaaaagtg
atccttcccggcagcaactcctcatgcctaactgtctctccaggtaccctggcaggtgcc
acggtaggaaagatctatgccatcgatgaggactctggactgaattcagagattacttac
tcagctacagcaccggagcttttgcaaaacagaagtccctttcagatcgattcaaggtca
gggaacatcaccttaagccaacagctccttcatacagacctgggaatgcatcacctgttc
attgtggtcagagatgggggtaaaccagttccactttataccactgtctggatgaatttg
ttggtcaatgacagcacagagccttgccacttggaccgggtgcccacctggacagggaca
ctaaacttggttcaaaccccttcaaaggaaccgatctgtgacgtggagacagccagattt
tcaaaagtgattctgttaataggcctgggtatgatgctggtgtccacatgcttgtttgtg
gccacagttatttgctgcctaaaacagaggagtagaagtctgaaaatgaacaagagagca
tacactgaggcgaatgagattccactcaggctcaaagacaaatattactctgattaa
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