Maylandia zebra (zebra mbuna): 101483799
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Entry
101483799 CDS
T02814
Symbol
prdm1
Name
(RefSeq) PR domain zinc finger protein 1 isoform X1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
mze
Maylandia zebra (zebra mbuna)
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mze03000
]
101483799 (prdm1)
Transcription factors [BR:
mze03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
101483799 (prdm1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
C2CH-3rd_BIRD-IDD
Zf-C2H2_ZNF451_C
zf-C2H2_6
zf-C2H2_jaz
zf-met
zf-C2HE
FOG1-like_PR
B129_C2H2-zf
Motif
Other DBs
NCBI-GeneID:
101483799
NCBI-ProteinID:
XP_004560195
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All DBs
Position
LG11:complement(25790084..25813856)
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AA seq
848 aa
AA seq
DB search
MCGWDQSYTATSHSSAMLTSEGAHTMEQDDARHGAKMASSATSTGSGGAGTMTDNDVDME
EADMTQWTEAEFEEKCTYIVKDTACEAGPDGDAMMMSTTRAEASLPRNLAFKHLAGSKEV
AGVCSREYIPKGTRFGPLVGEIYTADSVPKDANRKYFWRIYVDGEFHHFVDGLDETRSNW
MRYVNPAHSAAEQNLAACQNGMEIYFYTVKPVPAGAELLVWYCHDFARRLHYPPSGELMM
QKLKQSILEVKQQQVSNEEHVQETSSPSPVAVTPTPPKKEHSVLSILRGTSSSSSTKREP
NRPLPTRPRCADSPDRLLYPRALYPPLRAHPQISEDFLNHKAARLAYPSTHSPGNQSSAT
PSPSARSSPESSPHGSPSGAAPSPASFYPTGLGTYPGYSPPSAPLSSPFYPPGAPYSRYL
MPHHYPLPGGGIPTVGGIFPRMYPLYSNLLPHHVPLLPSETQRRFLIPDPVHPSSISGHR
DFLLPGPTSAFSAATSLRDTTGPHSTYPRHPHSHGSAHAPSSGSPTAGTAPPSEQVPTKP
TSALLGNTSERCHDDEAINLTKVKRGAGSAGYKALPYPLKKQNGKIKYECNVCSKTFGQL
SNLKVHLRVHSGERPFKCQTCSKGFTQLAHLQKHYLVHTGEKPHECQVCHKRFSSTSNLK
THLRLHSGEKPYHCKLCPAKFTQFVHLKLHKRLHSRERPHKCPHCHRHYIHLCSLRLHLK
GYCLAASSSSGSPAISSQIALEEVHRANEEIERFDVSEHAERLEQLQGGVEMEAMLEKQV
LGMLWRESDIKSSNFHPHHKSKTTELRSAGYGAYESPNETSVIKMRHSSPIPPLPANITV
KQESEDHA
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggatgggaccagagttatacagcgacctctcatagctcggccatgttgaccagt
gagggggcgcacaccatggagcaggacgacgcacgccacggagccaagatggcttcctct
gccaccagcacaggctcaggtggagcgggcacgatgacagataacgacgtcgacatggag
gaagcagacatgacacagtggacagaggcagagtttgaagagaagtgcacgtatattgtc
aaagacacggcatgtgaggcgggcccagacggtgatgccatgatgatgtcgacgaccaga
gccgaggcttcgctgccccgtaacttggccttcaaacacctggctggcagcaaggaggtg
gctggcgtgtgcagcagggagtacatccccaaaggaactcgcttcggtcccctggtgggc
gagatctacacggctgacagcgtccccaaagacgccaaccgcaaatacttttggaggatt
tatgtggatggagaatttcatcactttgtcgatggcctggatgagactcgctccaactgg
atgcggtatgtgaacccggcccactcggcagcagagcagaacctggcggcgtgtcagaat
ggcatggagatttacttctatactgtgaagcctgtcccagctggtgccgagctgcttgtc
tggtactgccacgactttgcccgacgcctgcactacccaccgtctggggagctgatgatg
cagaaacttaagcagtctattttggaggtaaagcagcagcaggtgagcaatgaggagcat
gtgcaagaaacatccagcccgtcccctgtcgcagtgacccccaccccaccaaagaaagaa
cacagtgttctttctattctgcgtggcacctcatcttcgtcgtccacaaagagggagccc
aacaggccgcttcccacacgtccacgctgtgccgacagccccgatcgtctcctgtaccct
cgtgccctctacccacctctcagggcccaccctcaaatatctgaggacttcctcaatcac
aaagctgcccgccttgcttacccctcaactcactcgcctggcaaccaatcctcagccaca
cctagcccatcagcaaggagcagcccagagagcagccctcacggaagcccctctggtgca
gcaccatcgcctgcttccttctatcccaccggactgggaacctatcctggttattcccca
ccgtctgcccccctctcctctcccttctaccctccaggggccccttactcacgttatctt
atgccccatcactatcctctccctggtggtggcatcccaactgtaggaggaatctttccc
aggatgtatcccctctacagcaacctcctgccccatcatgtgcccctcctgccttctgaa
acacagaggcgcttcctaatacctgaccctgtgcacccctcctccatttctggccacaga
gacttcctccttccagggcccacaagtgccttctcagctgctacttctctgagagacaca
acaggtcctcacagcacttatcccaggcaccctcactctcatggttcagcccacgctccc
tccagcggctccccgactgcaggcacagcacctcccagtgagcaggtgcccactaagcct
acctcagccctgctgggcaacaccagcgagcgttgtcacgatgacgaggcaattaacctg
accaaggtgaagcgtggtgcaggctcagcaggctacaaggcactgccttaccctctgaag
aagcagaatggcaaaatcaaatatgagtgcaacgtgtgcagcaagaccttcggacagctg
tcaaacctgaaggttcatcttcgcgtccacagtggggagagacctttcaaatgtcaaacc
tgtagcaaaggcttcactcagctggctcacctgcaaaaacactacctggtccacactggg
gagaagccacatgaatgtcaggtttgtcacaagcgcttcagcagcaccagcaacctgaaa
actcacctgcgccttcactcaggggagaagccctaccactgcaaactctgtcctgctaag
ttcacccagtttgtccaccttaagctgcacaagcgcctgcactcccgcgagcgtccacac
aaatgcccccactgccatcgccactacatccacctgtgtagcctgcgacttcacctgaag
ggctattgtttggctgcaagctccagctctggaagcccagccatttcaagccagattgcc
ttggaggaagtgcaccgcgccaatgaggagattgagcgctttgacgtcagtgaacacgct
gagcgactggagcagttgcagggaggggtggagatggaagccatgttggagaagcaggtt
ttggggatgctatggagggagagtgacattaagtcctcaaacttccatccccaccacaag
agtaaaaccactgagcttcggtctgcaggttatggtgcgtacgagtccccaaacgagacg
tcggtcatcaagatgcggcacagcagtcccatccccccacttcctgccaacataactgtc
aagcaggaatcagaggatcacgcttaa
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