Maylandia zebra (zebra mbuna): 101484075
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Entry
101484075 CDS
T02814
Symbol
msh2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
101484075 (msh2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mze03400
]
101484075 (msh2)
DNA repair and recombination proteins [BR:
mze03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
101484075 (msh2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
AAA_27
Motif
Other DBs
NCBI-GeneID:
101484075
NCBI-ProteinID:
XP_004561210
UniProt:
A0A3P9AZR7
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Position
LG8:complement(15881038..15889710)
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AA seq
937 aa
AA seq
DB search
MAVQPKQNLSMDSAAEHGFLNFIFSMPEKPDTTFRIFDRNEYYTVHGKDAIFAAKEVFKT
NGVIKYLGSGSRKLESVVLSKLNFEAFVKDLLLVRQYRVEVYRNHSKSSKEHDWKIEYKA
SPGNLTQLEEILFGGESGSEGCAGVVAVRLATGADGQRVVGVGYVDAAQWTMGVCEFPDN
EIFSNLESLLVQISPKECLLAQGEANTDGSKLREVVQRGGMLVSDRKRAEFNSKDMVQDL
NRLLRAKRGETVASNTLPELDKQVAMSCLAAVVRFLELLSDESNFNSFNLTTLDLGQYMR
LDNAAVRALNLFQGSPDDTTGAHSLAGLLNKCRTPQGQRLVNQWIKQPLMDKTKIEERLD
LVESFVCDSVLRQTCQDDLLRRFPDLHRLAKKFHRHTATLQDCYRVYQAVSQIPTLITAL
EGYTGSNKVLLNAVFLSPLRDLQTDCTKYQEMIETTLDMNQIDHHEYLVKASFDPVLSEL
REKMDVLEKRMQTVLNSAARELGLEAGKTVKLESNAVLGFYLRVTCKEEKSLRNNKKFTT
LDVQKNGVRFTNSKLSSLNEEYTKSREEYEEAQNAIVKEIINIASGYVDPLQTLSDVIAQ
LDAVASFAVTSVSAPVPFVRPQFQLLDHGCRRVELLQARHPCMEMDADTAFIPNDISFVQ
EDKSFYIITGPNMGGKSTFIRQVGVIALMAQIGCFVPCEKAELSVMDSILARVGAGDSQV
KGVSSFMSEMLETAAILRSATEKSLIIIDELGRGTSTYDGFGLAWAISEHIASKIGCFCL
FATHFHELTALAAQQPTVHNLHVTALTSHNTLTMLYRVKPGVCDQSFGIHVAELACFPPS
VLAAAKEKAEELEEFQEPAGDESEQEEEPKAKRRKTDKQVGENLIHYFLQKVKSLPLATM
TEEEVKAKLRKMKQKLVAKNNTYISEVLARCVPVKTA
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcagccgaaacagaacctgtccatggacagcgcagccgagcacggctttctt
aacttcattttctccatgccggagaagccggacaccacattccggatatttgaccgtaac
gaatattatacggttcacgggaaggacgccatattcgcggcgaaggaggttttcaaaacg
aacggggtcatcaaatatttgggttcagggagtcgaaagctggagagtgtggttctgagc
aagctgaactttgaggcctttgtgaaagatttgctgttggtgaggcagtacagagtggag
gtgtacaggaaccacagcaagagcagcaaggagcacgactggaagattgagtacaaggcc
tctccaggaaacttgactcagcttgaggagatcctttttggtggggaaagcggctcagag
ggctgtgcaggtgtcgtagctgtgcggcttgcaactggagctgatgggcagcgtgttgtt
ggggtcgggtatgtggatgcagcccagtggacgatgggagtgtgcgagtttccagacaat
gagatattctccaacttggaatccctgcttgtccaaatcagtcccaaagagtgtctccta
gcccagggggaagctaacactgatgggagtaaactgcgtgaggtggtgcagcgtggcggc
atgctagtctctgataggaagagagctgagttcaacagcaaggacatggtccaggatctc
aacaggctgctgagagcaaagagaggggagactgtggcgagcaacaccttacctgagctg
gacaaacaggtggcaatgtcatgtttggctgcagtggtgcgtttccttgaactgctctct
gatgagtccaacttcaactccttcaacctgaccactctggacctgggtcagtacatgagg
ctggacaacgctgccgtcagggctcttaatctcttccagggttcacctgacgacaccacc
ggagctcactcgttggccggtttgttgaataagtgccgtacgccgcagggtcagcggttg
gtcaaccagtggatcaaacagcccctcatggacaaaactaaaatagaggagaggcttgac
ctggtggaaagctttgtgtgcgactctgtgctgaggcagacctgtcaggacgatttgctg
aggcggtttcccgatcttcatcgactggccaagaagtttcaccgtcacacggcaacgctg
caggactgttatcgtgtctaccaggctgtgagccaaataccgactcttatcactgctctg
gagggatacacgggtagcaacaaggttctgctaaatgcagtattcctctcgcctctcaga
gacctgcagactgactgcaccaagtaccaagagatgattgaaaccacactggacatgaac
cagattgaccaccacgagtacctggtgaaggcatcatttgatccggtgctgagtgagctg
agagaaaagatggatgtgctggaaaaacgcatgcagaccgtgctgaacagtgcagccaga
gaactaggtctggaggcgggtaaaaccgtgaagctggagtcaaacgccgtgctgggattt
tacctgagagtcacatgcaaggaggaaaagagtctgaggaacaacaagaaattcaccacg
ctggatgtgcagaagaacggtgtgcgctttaccaacagtaagctgagctctctgaacgag
gagtacaccaaaagcagggaggagtatgaggaagcccagaacgccatcgttaaagagatc
atcaacattgcctcaggttacgtggatcccctccagacgctcagcgacgtgatagcgcag
ctggacgccgtggcgagttttgccgtcacatcggtgtctgctcctgtgccgttcgttcgg
cctcaattccagctcttagaccatggctgcaggcgcgtggagctgctgcaggctagacat
ccctgcatggagatggatgcagacactgcattcatacctaatgacatcagctttgtccag
gaagacaagagcttctatatcataacaggaccaaatatgggtggcaagtccacctttatc
cggcaggtgggtgtgatcgcattgatggctcagattggttgctttgtgccatgcgagaag
gcggagcttagcgtgatggacagcatcctggcaagggtgggtgcaggagacagccaggtg
aaaggagtctccagctttatgtccgagatgctagagacagccgccattctgcgttcggcc
acagagaagtcgctcatcataatcgacgagctcggcagaggcacgtccacctacgacggc
ttcggtctggcctgggccatcagcgagcacatcgcctccaaaatcggctgcttctgcctg
ttcgccacccacttccacgagctgacggcgctggcagctcagcagcccacggtccacaac
ctgcacgtcacagccctgacgtcgcacaacacactcacaatgctgtacagagtcaagcca
ggcgtgtgtgaccagagttttggaatccacgtggccgagttggcttgcttcccgccgtca
gtgctggccgctgcgaaggagaaggcggaggagctggaggaattccaagaacctgcagga
gatgagtcggaacaggaggaggagcccaaggctaagaggcgaaagacagacaagcaggtg
ggggaaaacctgatccactactttctgcagaaggtgaagtcacttccacttgccaccatg
actgaggaggaagtgaaggcaaagctcaggaaaatgaagcagaagctggttgccaaaaat
aacacgtacatcagcgaggtcctcgcacgctgcgttcctgttaaaactgcttga
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