Maylandia zebra (zebra mbuna): 101484098
Help
Entry
101484098 CDS
T02814
Symbol
rfc5
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze03030
DNA replication
mze03410
Base excision repair
mze03420
Nucleotide excision repair
mze03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
101484098 (rfc5)
03410 Base excision repair
101484098 (rfc5)
03420 Nucleotide excision repair
101484098 (rfc5)
03430 Mismatch repair
101484098 (rfc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mze03032
]
101484098 (rfc5)
03036 Chromosome and associated proteins [BR:
mze03036
]
101484098 (rfc5)
03400 DNA repair and recombination proteins [BR:
mze03400
]
101484098 (rfc5)
DNA replication proteins [BR:
mze03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
101484098 (rfc5)
DNA Replication Termination Factors
ELG1-RFC complex
101484098 (rfc5)
Chromosome and associated proteins [BR:
mze03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
101484098 (rfc5)
DNA repair and recombination proteins [BR:
mze03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
101484098 (rfc5)
Check point factors
HRAD17(Rad24)-RFC complex
101484098 (rfc5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_lid_RFC1
AAA_11
AAA_22
RuvB_N
AAA_assoc_2
ResIII
DEAD
AAA_14
AAA_24
DUF815
nSTAND_NTPase5
ATPase_2
AAA_7
PhoH
AAA_16
AAA_30
AAA_5
AAA_19
DNAX_ATPase_lid
TIP49
AAA_2
Thioredoxin_6
Glyco_hydro_57
Motif
Other DBs
NCBI-GeneID:
101484098
NCBI-ProteinID:
XP_004566745
UniProt:
A0A3P9D320
LinkDB
All DBs
Position
LG12:32526436..32531823
Genome browser
AA seq
335 aa
AA seq
DB search
MASTSKAPLQTRNLPWVEKYRPQTLDDLISHKDILSTIQKFISEDKLPHLLFYGPPGTGK
TSTILASARQLYKEKEFNSMVLELNASDDRGIDVVRGPILSFASTRTIFKKGFKLVILDE
ADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLSPDQMIPRL
EHVIQQENIDITPDGMKAIVTLSTGDMRRSLNILQSTSMAYGKVTEDTVYTCTGHPLRSD
IANILDWCLNKDFTSAYNQILELKTLKGLALHDILTEVHLLVHRVDFPPAIRISLLIKLA
DVEHRLASGTSEKIQLSSMVAAFQAVRELVVSEAP
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggcttctacaagtaaagcgccgttacagaccagaaatttaccatgggttgaaaaatac
agaccacagacacttgatgatctgatttcacacaaagatattctgagcactatccaaaag
tttatcagtgaggacaagcttccacaccttttgttctatggcccacctggaacaggaaaa
acctcaaccatactcgcttctgccaggcagctgtacaaagagaaggagttcaactctatg
gtgttggagctcaatgcatctgatgacagaggtattgatgtagtacgaggtcccattctg
agttttgccagcaccaggaccatcttcaagaagggcttcaagttggtgatactggacgag
gccgatgccatgacccaggatgcccagaatgcattgcgtcgagtcattgagaagttcaca
gaaaacactcgattctgtctcatttgcaactacctttccaagatcatccccgccctgcaa
tctcgctgcaccaggttccgctttggtccgctttcgccagaccagatgatccctcggttg
gagcacgttatccagcaggagaatattgacatcacgccagatggaatgaaggctattgtg
accttatcaacaggtgacatgagaagatcgctcaacatactgcagagcaccagtatggcc
tatgggaaggtcacagaagacacagtgtacacctgcacagggcaccccctccgctcagat
atagccaacatcctcgactggtgcctcaacaaagactttacttcagcgtacaaccaaatc
cttgagctgaagactctgaaaggtttggctttgcatgatattctcactgaggttcatctg
cttgtacacagagtggattttcctcccgctattcggattagtctgctcatcaagttggcc
gacgtagaacatcggcttgcatcgggaaccagcgagaagatccagctgagctccatggtt
gcagctttccaggcagtgagagagctcgtggtcagcgaagcaccttag
DBGET
integrated database retrieval system