Maylandia zebra (zebra mbuna): 101484169
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Entry
101484169 CDS
T02814
Symbol
smarca4
Name
(RefSeq) transcription activator BRG1 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101484169 (smarca4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mze03021
]
101484169 (smarca4)
03036 Chromosome and associated proteins [BR:
mze03036
]
101484169 (smarca4)
Transcription machinery [BR:
mze03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101484169 (smarca4)
Chromosome and associated proteins [BR:
mze03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
101484169 (smarca4)
Chromatin remodeling factors
BAF complex
101484169 (smarca4)
PBAF complex
101484169 (smarca4)
GBAF(ncBAF) complex
101484169 (smarca4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
101484169
NCBI-ProteinID:
XP_004563019
LinkDB
All DBs
Position
LG4:6420951..6436400
Genome browser
AA seq
1642 aa
AA seq
DB search
MSTPDPPMGGTPRPGPSPGPGPSPGGMMGPSPGPSPGSAHSMMGPSPGPPGSGHPHPPQG
PSGYPQDNMHQMHKPMEAMHEKGVPDDPRYGQMKGMGMRPGGHSGMGPPPSPMDQHSQGY
PSPLGGSEHAPSPVPANGPPSGPMMPGGPSGPGAGPMEGSGDSNQGMGQPNRGGPQGPGG
PPVAAGGAGGPTPFNQNQLHQLRAQIMAYKMLARSQPLPEHLQMAVQGKRPMPGMQQQPM
PNMPPSTGPGGGPGAGPGPAPANYNRQHGMVGPNIAPPGPAGVPPGMQGQPTNGPPKSWP
EGPMVNAAAPSNPPQKLIPPQPTGRPSPAPPSVPPAASPVMPPQTQSPGQPAQPPPMMLH
QKQNRITPIQKPRGLDPVEILQEREYRLQARISHRIQELENLPGSLAGDLRTKATIELKA
LRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQER
KRRQKHQEYLNSILQHAKDFKEYHRSITAKIQKATKAVATYHANTEREQKKENERIEKER
MRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRAHKAAQALKEKKKKKKK
KKKKPEAPEGAAPALGPDGEPLDETSQMSDLPVKVIHVDSGKILTGVEAPKAGQLEAWLE
MNPGYEVAPRSDSEGSGSEEEDEEEEEEDDQPQTSSAPTEEKKKIPDPDSEDVSEVDVLH
IIEHAKQDVDDEYGSASFNRGLQSYYAVAHAVTEKVDKQSSLLVNGQLKQYQIKGLEWLV
SLYNNNLNGILADEMGLGKTIQTIALITYLMEYKRINGPFLIIVPLSTLSNWVYEFDKWA
PSVVKVSYKGSPAARRSFVPILRSGKFNVLLTTYEYIIKDKQVLAKIRWKYMIVDEGHRM
KNHHCKLTQVLNTHYLAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAP
FAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRV
LYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPFMFQHIEESFSEHLGYS
GGIITGPDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRNFKYLRL
DGTTKAEDRGMLLKTFNDPASEYFVFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQA
QDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSGYERRAF
LQAILEHEEQDEVGARGGCRTRGAWEEDEVPDDETVNQMIARSEEEFEQFMRMDLDRRRE
EARNPKRKPRLMEEDDLPGWILKDDAEVERLTCEEEEEKMFGRGSRQRKEVDYSDSLTEK
QWLKAIEEGNLEDIEEEVRHKKTTRKRKRDRDHDGGPATPSSSSGRGRDKDDDGKKAKKR
GRPPAEKLSPNPPSLTKKMRKIVDAVIKYKDGNGRQLSEVFIQLPSRKELPEYYELIRKP
VDFRKIKERIRSHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKI
EKEDESEGEESEEEEEEVDEGSESECRSVKVKIKLGRKEKGERGGKGQRRRGRGARAKPV
VSDDDSEEEQEEERSASGSEED
NT seq
4929 nt
NT seq
+upstream
nt +downstream
nt
atgtccactcctgacccccctatgggagggacacctcgccctggtccctccccaggccca
gggccatctccaggaggcatgatggggccaagtccaggtccctcaccaggctcagcccac
agcatgatggggcctagcccaggacctccaggatctggacacccccatcctccacaggga
ccctcaggatatcctcaggataacatgcaccagatgcataaaccaatggaagccatgcat
gagaagggagtgcccgatgaccctcgctatggccagatgaagggcatgggcatgagacca
gggggacacagtgggatgggaccccctccgagcccgatggatcaacattcccaaggttac
ccctctccattaggaggctcggagcacgcacctagtcccgtcccagccaacggccctcct
tctggtcccatgatgcctggaggcccatctggcccgggagcaggccctatggagggaagt
ggagactcaaatcagggtatgggtcaaccgaatcgtggtggtccccaagggccagggggc
ccccctgttgcagcaggtggtgcaggtggacccactcccttcaaccagaaccagctacac
caactcagggcacagattatggcctacaagatgctggcacgcagtcagcctctaccagag
cacctgcagatggctgtgcagggaaagaggcccatgccagggatgcagcaacagccaatg
cctaatatgccaccttctacagggcccggaggtggcccgggtgctgggccgggaccagct
ccagcaaattacaatagacaacatggtatggtaggtcccaatatagctcctcctggacct
gcaggagttcctccaggtatgcaaggccagcctacgaatggacctcccaaatcatggcct
gaaggaccaatggtgaacgctgctgccccttccaaccctccccagaagttaattccaccc
cagcccacaggccgaccttctcctgctcctccctcagtgcctccagcagcctcccctgtt
atgccccctcagacacagtcgccaggacagcctgcacagccccctcccatgatgctacac
cagaagcagaatcgcataacccccatccaaaaacctcgtgggcttgatccagtggagatc
ctccaggagagagagtacaggcttcaggctcgtatttctcaccgtatacaggagcttgag
aacctgcctggctctctagctggtgatctacgcaccaaagccaccatcgagcttaaggcc
cttaggctgcttaacttccagagacagttgcgccaggaggttgttgtttgcatgcgtcgt
gacactgctttggaaactgcccttaatgctaaggcctataaacgcagcaaacggcagtct
ctacgtgaggctcgtatcactgagaagctggagaaacagcagaagattgaacaagagcgc
aaacggcgccagaaacaccaggaatacctcaacagcatcctgcagcatgccaaggacttt
aaggagtatcaccgctccatcacagcaaagatccagaaggccaccaaagctgtcgccacc
tatcatgccaacactgagcgcgagcagaagaaagagaatgaacgcattgaaaaagagagg
atgcgaaggctgatggctgaagatgaagaaggttatcgtaaacttatcgaccagaagaaa
gacaagcgcctggcgtacctgctacagcagacagacgagtacgtggccaacctcactgag
ttggtgcgcgcgcacaaggctgcacaagcactcaaagagaagaaaaagaagaagaagaag
aaaaagaagaagcccgaggctccagagggagctgctcctgctctgggacctgacggagag
cctttagatgagactagtcaaatgagtgacctgccagtcaaggtcatccatgtagacagt
ggaaagatcctgacgggtgtggaagcacccaaggccgggcagctggaagcctggcttgaa
atgaacccaggatacgaagtagcgccacgctccgacagtgaaggcagcggttcagaagag
gaagatgaggaggaggaggaagaggacgaccagcctcagacgtcttcagctccaacagaa
gagaagaagaagatccccgaccccgacagtgaagatgtatcagaagtggatgtcctgcac
atcattgaacacgccaagcaggatgtagacgacgagtacggcagtgcaagtttcaaccgc
ggcctgcagtcctactatgcagtggctcacgctgtcactgagaaagtggataaacagtcc
tcactgctggtcaatgggcagctcaagcaataccagatcaaaggtctggagtggctggtg
tcactttacaacaacaacttgaatggcatcctggctgatgagatgggtctaggcaaaacg
atccagactatcgccctcatcacttacctcatggagtacaagcgcatcaatgggcccttc
ctcatcatcgtacctctctcaactttatcaaactgggtgtatgagtttgataagtgggca
ccgtctgttgtgaaggtttcctacaaggggtctccagctgctcgacgttcattcgttcca
attttacgtagcggaaagttcaacgtgctgctgaccacatatgagtacattattaaggat
aagcaggtgttagcaaagatccgctggaagtacatgattgtggatgaaggccatcgtatg
aagaaccatcactgtaagctgacccaagtcttgaacacacactacttggcgccacgacgt
ttgctgctcacaggaactccgctgcagaacaagctccccgagctctgggccctgctcaat
ttcctcttgcccacgatcttcaagagctgcagcaccttcgaacagtggttcaacgccccg
ttcgccatgactggagagaaggttgacctaaatgaagaagagaccatcctgatcattcga
cgtttacacaaggtgctccgacctttcttgctgcggcgactcaagaaagaagtcgaggcg
cagctgccagagaaggtggagtatgtcataaagtgcgacatgtcagctctgcagagggtt
ctgtacagacacatgcaggccaagggagtcttgctcacagacggttcagaaaaagacaag
aagggtaaaggtggcacgaagaccctgatgaacactatcatgcagctgaggaagatatgc
aatcaccccttcatgttccagcacattgaggagtccttctcggagcatctcggttattct
ggtggaatcatcacaggccctgacctgtatcgtgcctctggaaagtttgagctgctggat
cgtatcctgcccaagctgagggccaccaaccacaaagtgctgctcttctgtcaaatgacc
tcactcatgaccatcatggaggactattttgcgtaccgcaatttcaagtacctgcgtctg
gatggtaccaccaaagcagaggatcgtggcatgctgctgaagacgttcaacgaccccgcc
tctgagtactttgtgttcttgctcagcaccagggctggaggtctgggcctgaacctgcaa
tctgctgatactgtcatcatttttgacagtgactggaacccgcatcaggacttgcaggcc
caggatagagcgcaccgtatcggtcagcaaaacgaggtgcgcgtgctgcgcctctgcacc
gtcaacagcgtggaggaaaagatcctggcagcagccaagtacaagctgaacgtggaccag
aaggtcatccaggccggcatgttcgaccagaagtcttcaggctatgaacgtcgggccttc
ttacaggctattctggagcacgaggagcaggacgaggtcggggctcgaggaggctgccgc
actaggggggcgtgggaggaagacgaagtgcctgatgatgagaccgtcaatcagatgatc
gcgaggagcgaagaggagtttgaacagttcatgcgtatggatctagacagacgccgcgag
gaggcccgtaaccctaagaggaaaccccgtctgatggaggaggacgacctgcccggctgg
attttgaaagacgacgctgaggttgagaggctaacctgcgaggaggaggaggagaagatg
tttggcagagggtcgcgccagcgcaaggaggtggactacagcgactcgctcacagagaag
cagtggctcaaggccatagaagaaggcaatctagaggacattgaagaggaagtgcgtcac
aagaagacgaccagaaagcgcaagagagaccgtgatcacgacggtggcccggccacaccc
agctccagcagcggccgcgggcgggacaaggacgacgatggaaagaaagcaaagaaacgg
ggtcgcccacctgctgagaagctctctcctaaccctccatctctcactaagaaaatgagg
aagattgttgacgctgtcatcaaatacaaggacggaaatggccgacaactgagcgaagtc
ttcatccagctcccatctcgcaaagagcttcccgagtattatgagctcatccgcaaacca
gtggacttcagaaagatcaaggagcggatccgcagccacaaataccgcagcctgaacgac
ctggagaaggatgtgatgctgctgtgtcagaacgcccagactttcaacctggagggctct
ttgatctacgaggactccattgtgctccagtccgtcttcaccagcgtgagacagaagatc
gagaaggaggatgaaagcgagggagaagaaagcgaggaggaagaggaggaggtggatgaa
ggctcggagtctgaatgtcgttcagtgaaggtcaagattaaactgggccggaaagagaag
ggggagagaggagggaaaggacaacggcggcggggccgcggagcccgggctaaacccgtg
gtaagcgacgacgacagcgaggaggaacaggaagaggagcgttcagccagtggcagcgag
gaagactga
DBGET
integrated database retrieval system
