Maylandia zebra (zebra mbuna): 101484278
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Entry
101484278 CDS
T02814
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
mze
Maylandia zebra (zebra mbuna)
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mze03041
]
101484278
Enzymes [BR:
mze01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101484278
Spliceosome [BR:
mze03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
101484278
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
101484278
NCBI-ProteinID:
XP_004563116
UniProt:
A0A3P9BCQ6
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All DBs
Position
LG4:complement(7776421..7783744)
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AA seq
623 aa
AA seq
DB search
MRGSYGDRDRDRGRDRGNPRFGSSRGGPPPGKKFRNPGERLRKKRWDLNELPKFEKNFYN
ENSEVQRMSQYDVEEYRRKKEITVRGSGCPKPVTSFHHAQFPQYVMDVLMQQNFKEPTAI
QAQGFPLALSGRDMVGIAQTGSGKTLSYLLPAIVHINHQPYLERGDGPICLVLAPTRELA
QQVQQVAYDYGKSSRIKSTCVYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLR
RCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYVQI
NVGALELSANHNILQIVDVCVESEKDQKLIQLMEEIMAEKENKTIIFVETKKRCDDLTRR
MRRDGWPAMCIHGDKSQPERDWVLSEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPN
SSEDYIHRIGRTARSTNKGTAYTFFTPGNLRQARELIRVLEEARQAINPKLLQLADSGRS
GGGGRSRFRNSNSNNPNMMYQDECDRRMRSAGGGSSSKDGRGSSYSRGGNNRDGDQSSSY
RDRSSRDGGRSYSSGSYDQYQNNSSSRGGSSSAGTAAGNAPPPSSGPQPLMAQQFNPPQP
MMGLMGHSPFQFAPPPASLSGRK
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgagaggttcttacggagacagagaccgagaccgtggtcgtgacagaggcaatccccga
ttcggatcaagcagaggaggaccacccccgggtaagaagtttcggaatcctggggaacgc
ttacgaaagaagagatgggacctgaatgagcttcctaaatttgagaaaaacttctataat
gaaaattccgaagtgcagcgaatgagccagtatgatgttgaggagtatcgcagaaagaaa
gaaatcacagtccgaggctcaggctgcccaaaacctgtcaccagcttccatcatgcacag
tttcctcaatatgtaatggatgtactgatgcagcaaaacttcaaggaaccaacagccatt
caggctcaaggtttccctctggcactcagtgggagagacatggtgggcattgctcagacg
ggttctgggaagactttatcgtatctcctgcctgcaatcgtgcacatcaatcatcagccc
tacttggagcgtggagatggacccatttgcttggtgttggcccccacgagagaactagct
cagcaggtccagcaggtggcatatgactatggaaagtcatcacgcatcaaaagcacttgt
gtgtacggcggtgctcccaagggacctcaaatacgagacttggagagaggcgttgagatc
tgcatcgccactccgggtcgtctcattgacttcctagaagctggaaagaccaacctgcgg
cgctgcacatacctagttctggatgaggctgaccgcatgctggacatgggtttcgaacca
cagatacgcaaaattgtggatcagatcaggccggacagacagactctgatgtggagcgct
acctggcctaaagaagttcgccaactggcagaggacttcctgaaggactatgtccagatc
aatgttggagctctggagctcagcgctaaccacaacatccttcaaattgttgacgtttgc
gtggagagcgaaaaggaccaaaagcttatccagctgatggaagagattatggctgagaag
gaaaacaagaccatcatcttcgttgagaccaagaaacggtgtgatgacctgacacgtagg
atgagacgtgacgggtggccagcgatgtgtattcatggtgacaagagtcagccagagaga
gactgggtattatcagagtttcggagtggcaaagcacccatcctcattgctactgacgtc
gcctcacgtgggcttgatgtggaggatgtcaagtttgtcatcaactatgactaccctaac
tcatccgaggattatatccaccgcatcgggcgtacagctcgcagcactaacaaaggcacc
gcttacacctttttcactccggggaacctccggcaggcccgagagctgatccgggtcctg
gaggaagcccggcaggcgatcaatcccaaactgctgcagctggccgacagtggacgcagc
ggaggaggtggccgttcccgtttccgcaactccaattcaaacaatcccaacatgatgtac
caggatgagtgtgatcgtcggatgcgttctgctggtgggggcagcagctcaaaggatggc
cgtggcagcagctacagccgcggcggaaacaaccgggatggggatcaatcttcttcttac
agagatcgcagcagcagggatggaggacgtagttatagctccggctcctatgaccagtac
cagaataacagcagctccagaggtggctccagctcagcaggcaccgctgcggggaatgcc
ccacctccttcatcaggccctcagcctctaatggctcagcagttcaaccctccgcagcct
atgatgggtttgatggggcactcgccattccagtttgcgcctcctccggcatctctgtct
gggaggaaatga
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