Maylandia zebra (zebra mbuna): 101484314
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Entry
101484314 CDS
T02814
Symbol
chd5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5 isoform X1
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
mze
Maylandia zebra (zebra mbuna)
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mze03036
]
101484314 (chd5)
Chromosome and associated proteins [BR:
mze03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
101484314 (chd5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
DUF1087
PHD
Chromo
PHD-1st_NSD
ResIII
HDA2-3
PHDvar_NSD
HTH_CHD1_Hrp3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
101484314
NCBI-ProteinID:
XP_004547494
LinkDB
All DBs
Position
LG5:26391514..26428390
Genome browser
AA seq
2009 aa
AA seq
DB search
MPGSLSNEDEGQDDMDFEDDIPDEDDEGERNTVPLTPLDRFFSDDESLKQQKKKPKKMKE
GKLPKVKKRKKEGTIQARLDSDLEEISEVEEERERPEIGSESESSMYGPTKKKKKKPKEK
KEKKPRKKKRDEEDDDDDDDDGNMKEPKSSSQLMHEWGLEDVQYGFTEDDYKTITNYKAF
SQFLRPLIAKKNPKIPMSKMMTVLGAKWREFSANNPFKGASATAVAAAVAAAVETVTVAQ
PTSVSSSQLSSQLGPIKKAKTKEGKGPGVRKRSKTVKEVKKKPKPKKTKSKSGQSGKKKK
ASSSEEDFLEESDFDDISIHSASVLSDTSGAATKKKARRGRKKRKKEDGDGYETDHQDYC
EVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEAKDEDEDEEEA
PGEEEDDHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCMCPPLKG
KVQKIMHWTWGEAPLPAEPPTGPDGKPTDPLTNPPLKGRPEREFFVKWAGLSYWHCSWVS
ELQLELYHTVMYRNYQRKNDMDEPPPYDYGSGEEELNSEKRKSKDPQYAAMEERFYRYGI
KPEWMVIHRIINHSFDKDGDVHYLIKWRDLPYDQCTWEVDDFDIPDYESHKASYWDHREQ
ILGEDQRPLVVRKGKKLKDDHPKREVPPDAPIIDPTIKFEHQPWYINATGGTLHPYQLEG
LNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPFLVSAPLSTIINWERE
FEMWAPDFYVVTYTGDKDSRAIIRENEFTFEDSAVKSGRKVFRMKKDTPIKFHVLLTSYE
LITIDQAILSSVTWACLVVDEAHRLKNNQSKFFRILNGYKIYYKLLLTGTPLQNNLEELF
HLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELI
VRVELSPMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAP
VLPNGSYDGNLLVKSSGKLTLLQKMLKKLKDEGHRVLIFSQMTKMLDLLEDFLEFEGYKY
ERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLASADTVIIYDSDWNPHND
IQAFSRAHRIGQNKKVMIYRFVTRGSVEERITQVAKRKMMLTHLVVRPGLGSKMGSMSKQ
ELDDILKFGTEELFKDEMEAARTMGDNKDGEEGSVIHYDDDAISKLLDRSQDATEDTEIQ
NMNEYLSSFKVAQYVVKEEDGEEEVEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNL
GKGKRIRKQVNYNDTTQEDQEWQDDLSDNQSEYSVGSEDEDEDFEERPEGGRRQSRRQLK
SEKDKPLPPLLARVGGSIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSHWLVRDLRGKSE
REFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEHVN
GKLSSPDLIPIGMELKKLNESVSSDPNTPVPASPVATQPSTPIPQEKTESFLGTAEEKEA
TEPESKKLSEQEASTVEPASAPEKATDSDENKGNSEEKTGDERNRTESPSTKTEPSANPK
EPAFKQSEAQSTITSPKMEPCKETEKSSEKGDTDSPLAKTEDKENKPDDVKSEDALEGRI
NGDKDTLDEIDESRKEDKNGFKAKFMFNIADGGFTELHTLWQTEERAALSSGKMHDIWHR
RHDYWLLAGIVTHGYARWQDIQNDPRYAILNEPFKTEMHKGNYLEMKNKFLARRFKLLEQ
ALVIEEQLRRAAYLNMTQDPSHPAMALNTRFAEVECLAESHQHLSKESLAGNKPANAVLH
KVLNQLEELLSDMKADVTRLPNMLSRIPPVSARLQMSERSILSRLTSRGNEPPPQQPFSP
GGFGCSQMYSGSFGGGFRGPGGQPMVNYSQMPLGPYVSGNNQHFALYFSTNGPPPPTSHL
DKKSLDSLRDVATPDLKSGKPSDVICIED
NT seq
6030 nt
NT seq
+upstream
nt +downstream
nt
atgccggggtcgctgagcaatgaagacgagggacaagacgacatggattttgaagacgat
ataccagatgaggatgacgaaggtgagcgcaacacagttcccctcacacctctcgaccgc
ttcttttctgacgacgagtccctcaaacaacaaaagaagaagcccaaaaagatgaaggag
ggaaaactgccgaaagttaagaagaggaaaaaagagggaacaattcaggcacgacttgac
agtgacctggaagagatttcagaggtggaggaggaacgggaacgtccggaaatcggctcc
gaaagtgagagcagcatgtatggtcccaccaagaagaagaagaagaaacccaaggagaag
aaagagaaaaagcccagaaagaagaagagagatgaagaggatgacgatgatgacgacgat
gatggtaacatgaaagagcccaaatcatcgagccagctgatgcacgaatggggtcttgaa
gatgttcagtatggcttcactgaggatgactataaaaccataaccaactacaaggctttc
agccagttcctcaggcctctcattgccaagaagaacccgaagattcccatgtcaaagatg
atgacagtgttaggggccaagtggcgggagttcagtgccaacaacccgttcaaaggtgca
tctgccaccgctgtggccgccgctgtggctgctgcagtggaaacggttactgtggcacag
ccaacgtctgtcagcagcagccagctgagctctcagctggggccgatcaaaaaagccaaa
accaaagagggaaagggaccaggagttagaaagagaagtaagactgtgaaagaagtgaag
aagaagcccaagccgaagaagaccaaatcaaagtcgggccaaagtgggaagaagaagaaa
gcatcctcgagtgaggaggacttcctagaggagtcagactttgatgacatcagcatccac
agtgcctctgtgctttctgatacctcgggggccgccaccaagaaaaaggcccgacgtggg
cggaaaaaaaggaaaaaggaggacggtgatggctatgagacagaccaccaagactactgt
gaggtttgccagcagggtggagagatcatcctgtgcgacacctgtcccagagcttaccac
ctggtctgtctggaccctgagctggagaaggccccagagggaaaatggagctgtccacac
tgtgagaaggagggaatccagtgggaggccaaagatgaagatgaagatgaggaggaggct
ccaggtgaggaagaggatgaccacatggagttttgcagagtttgtaaagatggaggagag
ctgctgtgttgcgatacctgcccatcatcctaccatatccactgcctcaacccgccgctt
cccgagataccaaatggggagtggttatgtccgcgctgtatgtgccctccccttaaagga
aaagtacaaaagattatgcactggacgtggggagaagctccgctgccagccgaaccacct
acaggacctgatggcaagccaacagatccgctcaccaaccccccgctcaagggccgccca
gagagggagttctttgttaagtgggctggcctttcgtactggcactgctcctgggtcagc
gaactgcagttggagctgtaccacacggtcatgtaccggaactatcagcgtaagaacgac
atggacgagcccccgccatatgactacggctccggagaggaggagctcaacagtgagaag
agaaagagcaaagatccccagtatgctgcgatggaggagcgcttctaccgttatggcatt
aaaccagagtggatggttatccaccggataatcaatcatagttttgataaagatggtgat
gtgcactacttgatcaagtggagagacctgccctacgaccagtgcacctgggaggtggat
gatttcgacatcccagattatgaaagtcataaagcttcttactgggatcacagagagcaa
attttaggagaggatcagcgccctcttgtggtgaggaaaggcaagaaactaaaagatgac
catccaaagagagaagtccctcctgatgccccaatcatagatcccaccatcaagtttgag
caccaaccatggtacattaatgccactgggggaacgctacatccgtaccagctggaaggc
ctgaactggttgaggttctcctgggctcagggcacagatacgatcctggctgatgaaatg
ggcctgggaaagacggtgcagacgatagtgtttctctactcgctgtataaggagggtcat
tccaaaggacctttcttggtgagcgcacccctttccactatcattaactgggagagagaa
tttgagatgtgggctccagatttctatgtggtgacatacactggagacaaagacagcagg
gcaatcatcagggagaacgagttcacctttgaagacagtgcagtaaaatcagggcggaag
gtgttccgtatgaagaaagacactcctatcaagttccatgtgctgctgacatcttatgag
ctgattactatagatcaagccattctgagctctgtcacctgggcctgtctggtggtagat
gaggcccacagattgaaaaacaaccaatcaaagtttttcagaattctcaatgggtataag
atctactacaagctgctgctcactggaactcctcttcaaaacaacctagaagagctgttc
cacctccttaacttcctcaccccagagcgcttcaataacctggaaggcttcctggaggag
tttgctgatatctctaaagaggatcagatcaaaaagctccacgacctgctgggacctcac
atgctcaggaggctgaaagctgatgtcttcaagaatatgcctgcaaagacagagctgatt
gtcagagtggagcttagccccatgcagaagaaatattacaagtttatcttgacacgaaac
ttcgaggctttgaactccaaaggtggagggaaccaggtgtccctcctcaacattatgatg
gacctgaaaaagtgctgcaaccacccttacctgttccctgtggccgctgtggaggctcct
gttttacccaatggctcttatgatggcaacctactggtgaagtcctcaggaaaactgacg
ctgcttcagaaaatgctaaaaaagctcaaagatgaaggacacagagttctcattttctct
cagatgacaaagatgctggatctgctcgaggactttcttgagtttgagggttataaatat
gaacgtattgatggggggattactggaggtctaaggcaggaagccattgaccgcttcaat
gcaccaggtgcgcagcagttctgcttcttgctttcaacacgagctggaggccttggcatc
aacctggcgagcgcagatactgtcatcatctacgactctgactggaatcctcacaatgac
atccaagcatttagcagagcgcaccgtataggccaaaacaagaaagtgatgatctaccgg
tttgtgactcgaggctcagtggaggagcgaatcacccaagtggccaaaaggaaaatgatg
ctgactcacctggtggtgcgccctggcctgggctccaaaatgggctccatgtccaaacaa
gaactggatgacatcctaaagtttggaactgaggagctttttaaagatgaaatggaagca
gcacgaacaatgggtgataacaaagatggtgaggagggcagtgtgattcactacgacgat
gatgctatctcaaagctgctggaccgcagccaggatgccactgaagacacagagatacag
aatatgaatgagtacctgagctccttcaaggtggctcagtatgtggtgaaagaagaagat
ggagaggaggaggtagagcgagagatcattaagcaagaggagaacgtggatccggactac
tgggaaaaactcctccgccaccactatgagcaacagcaggaagatctggcgcgaaatctg
ggcaaaggcaaacgcatccgaaagcaggtcaactacaatgatacgacccaggaagaccaa
gaatggcaggatgatctttcagacaatcagtcggagtactccgtggggtccgaggacgag
gacgaagatttcgaggagaggcctgaaggaggacgcagacaatcacgtcggcagctcaag
agtgagaaagacaaacctcttccacccttactggctcgggttggaggcagtatcgaggtc
cttgggttcaacgctcgtcagaggaaagccttccttaatgccatcatgcgctggggcatg
ccccctcaggatgctttcaactctcattggctagttagggacctgagagggaagagtgag
cgcgagttcagggcctacgtgtctctgttcatgagacatttatgtgagccgggggcagat
ggagcagagacctttgccgatggagtccctcgcgaggggctgtctcgtcagcatgttctt
accaggatcggagtcatgtcccttgtcaggaaaaaggtgcaagagtttgagcatgtaaat
gggaagttaagctctcctgatctgattcccattggaatggagctgaagaaactgaatgag
agtgtatcctctgatcccaacacgcctgtgccagctagccctgtggctactcagcccagc
actcctatcccacaagaaaaaactgagtctttcttgggtactgcggaggagaaggaagcc
acagagccagagagcaagaaactgtcagagcaggaagcttccactgttgagccagcatct
gcacccgagaaggcaactgacagtgacgagaacaagggcaactcagaggagaaaacagga
gatgagaggaacagaaccgagtcgccctccacaaagacggagccatctgctaacccaaaa
gagccagctttcaaacagtccgaagcgcaatccactatcacctcacctaagatggagcca
tgcaaagaaaccgaaaagtcctcagaaaaaggagacactgattctcctctggcaaaaact
gaagacaaggaaaataaaccagatgatgtaaagagtgaagacgcattagagggtcgaata
aatggagacaaggacactttggatgagatagacgagagcaggaaagaagacaaaaatgga
ttcaaagcaaagttcatgtttaatattgctgacggaggttttacagagctgcacaccctc
tggcagactgaagagcgagcagcgctgtcttctggaaagatgcatgacatctggcaccgt
cgccatgactactggctgttggctggcatcgtgacacatggctacgctcgctggcaagac
attcagaatgatccacgttatgcgattctgaatgagcctttcaagaccgagatgcataag
ggcaactacttagaaatgaaaaacaaattcctggctcgccgctttaagttgttagagcag
gctctggtgatcgaggagcagctgaggcgggcggcttacctgaatatgacccaggacccg
agtcaccctgccatggcactcaacactcgctttgccgaggtggaatgtctggccgagtcc
caccaacacctgtccaaagagtctctggctgggaacaaacctgccaacgccgtgctgcac
aaagtgctgaaccagctggaggaacttctgagtgacatgaaagcagatgtgacacgactg
cccaacatgctgtccaggatcccaccggtgtcggcgaggctgcagatgtctgagcggagc
atcctgagccgcctcaccagccgaggcaatgaacctccaccgcagcagccgtttagtcca
ggtgggtttggctgctcccagatgtacagcggcagttttggaggcggattcagaggacca
ggcggacagcctatggttaactatagtcagatgcccttaggaccatacgtcagcggtaac
aatcaacattttgcactatatttctccactaatggccccccaccccctacaagccatctg
gacaagaagtcacttgactccttgagggacgtggctacgcctgacctcaaatcaggcaaa
cctagtgatgtcatctgtattgaggactag
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integrated database retrieval system
