Maylandia zebra (zebra mbuna): 101484455
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Entry
101484455 CDS
T02814
Symbol
edc4
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101484455 (edc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mze03019
]
101484455 (edc4)
Messenger RNA biogenesis [BR:
mze03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101484455 (edc4)
mRNA degradation factors
5'-3' decay
Decapping complex
101484455 (edc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
Beta-prop_TEP1_2nd
RMC1_N
WDR55
PIN_8
Motif
Other DBs
NCBI-GeneID:
101484455
NCBI-ProteinID:
XP_004564663
UniProt:
A0A3P9BUS9
LinkDB
All DBs
Position
LG7:56344447..56373821
Genome browser
AA seq
1392 aa
AA seq
DB search
MASNTNIDIEGATQHLRDILKLDRPGNSTDGNSSESGRKPSFNGELNGLLGTGLLGSTDR
STMSESTRPISTDLSSAQEIQIICLSGDDGSTCIPITSNNVEIVASQDSSINSKARGSNK
VKIQPVAKYDWEHKYYYGRLIAVSNAFLAYAIRGANNHAMVRVLSLEFGERSLLKGFTGA
VTDLAFAHLDSSLLGCVDEAGNLMVWQLTYTANKILDQIVVHIRRPENTPLNSHRRLIWC
PFIQDDNEENQDDASQTLALLHEDRAEVWDLEALRANNSSWPVDATEVKEGLIAVKGHTQ
RVSEGALSPDGTVLATASHDGYIKFWQIYIEGGQDKPRCLHELRPHGGRPLSCLLFCDNH
KRQDPEVPFWRFLITGADQNQELKMWCTVSWTCLQTIRFSPDPLNSSTLPSLKASLDLSA
EYLILTDVQRKVLYVMELRQDLEKGKANFTAVSEFLLTHPVLSFGVRDVTQCRLRHTEVL
PAEEESESMTTEGPQGPTESKSGIQIKLYCVHTKSLQDVQIWFQPNAGSNSAAFLPHSDS
QDGLAGFSDHLTDQSSDKDSGSGSQTDLRKIPSLPAPSDFLSNSGTGSGVMPKLMTPDAF
MTPSTSVPASPGSSASSLTIVTAISSNSDSTNRAMEDASQSPNRADNSSTGLPLSASTSS
PRAASTVLLPGLESLQALATPSGPLVLDSSQVLDPPLLPPLASPTRARSPDVISSASTAM
SQDMPEIASQTLQLQRGLVSSLDPLPLSALQTDSMASAASALHLLTSPRSASNSGLLALE
LGGAEGPVGGAAESESRLSHTPSLLENALSQENPVIGGGSSDGNVSHTPWPAAPDITRET
RNSLRDNGLVDCSREESQDRHLSSPYHRRSYHLPQNDSQDAGAEQSDPDDEVASLASSSG
NCGSRSSHRLPVNDWKTSPRGSPKPKRKIKKDDSESSQSRQMDSGQFNAEVQDELMMLLR
SQQRELTELRGQIETMQSSIMAQVEHVLTNHQEQEHRRLERVLAESQNHQQQLQEQLSQH
LSHALSSALTNRMDKVLRDEMKKTVPQTISKTLEPVTGQLNNTIAAKLTAVEVTLKDNVG
KVVKSKNTTDAIGRAAAEAMQGPIQAAYKDAFQSIVLPVFERGCQSMFQQINDSFKQGTQ
EYIQQLETHMKNRKQRDQDTRDPMIGQLQQMIDNFQSSTDQLGNNITANVRAEVQHQIQM
MVGNLQESILSHVQRIVKGEVSLAMKEQQAVVTSSIMQAMRSAASTPVPTAHLDYQTQQT
NILQLLQQGQLNQAFQQALSATDLNLVLYVCETIDSQQVFGQHPCPLSQPVLLSLIQQLS
SNLTTRSELKISYLEDAVMNLDHSDPLTRDHMSSVLAQVRPKLFAFLQQDPHSPLSKRAR
RLMMMLQGLVNH
NT seq
4179 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccaatactaatatagacatcgagggtgcaacccagcatcttcgggacatcctc
aagctcgaccgccccgggaacagcaccgatggaaattcaagtgaaagtggtagaaagcca
tcttttaatggagagctgaatgggctattgggaacaggccttctggggagcactgaccgg
tcaaccatgtcagaatcgacaagacccatctccacagatctcagcagtgctcaggagatt
cagataatctgcctttctggtgatgatggctctacctgtattccaattacttctaacaat
gtggagattgtggcaagccaagactctagcatcaacagcaaggctcgaggcagcaacaag
gtgaagattcagcctgttgctaagtacgactgggagcacaagtattattacggcagactg
atagctgtgtccaatgccttcctggcctacgccatcagaggagccaacaatcatgctatg
gttcgtgtcctcagtttggagtttggtgagcgttccttactgaagggattcaccggggcc
gtcacagatctggctttcgcccaccttgattcatctctgttaggttgtgtagatgaagcg
ggcaacctgatggtctggcagctcacctacactgccaacaagatactagatcagatagta
gttcatatccgacggccagaaaacactccactgaattcccatcgtcgcctcatctggtgt
ccattcatccaggatgacaatgaggagaaccaggatgatgccagtcaaactttggctctt
ctacatgaagacagggctgaggtatgggatctggaggccttgagagccaacaacagcagc
tggcctgttgatgccacagaagtaaaggagggcctcatcgcagtcaaggggcatacccag
agagtcagtgaaggcgcactctctccagatggaaccgtgttagccacagccagccatgat
ggatacatcaagttctggcagatatacatagaaggcgggcaagacaaacccagatgtctt
catgaattgcggcctcatggaggacgtcctctctcctgtcttcttttctgtgacaaccac
aagaggcaggatcccgaggttcctttctggcgatttctgataactggagctgaccaaaac
caggagttgaagatgtggtgcactgtttcctggacctgtttacaaaccatcaggttctcc
cctgatccattaaactcatcgactctgccaagcctcaaggccagcctggacctctctgct
gagtatctgatcctcactgatgtgcaaaggaaggttctatatgtgatggagctgcgacag
gacttggagaaaggaaaggcaaatttcacagctgtgtcagagttcctgctgacccaccct
gtgctcagctttggggtacgtgatgttacccagtgtcgattgcggcacactgaggtcctt
cctgctgaggaggagagtgaaagcatgacaacagagggccctcaaggacccacagagtcc
aaatctggaatccagattaaactctactgtgtccacaccaagagtttgcaggatgttcag
atttggtttcagcccaatgctggttccaactctgcggccttccttcctcattcagattct
caggatggtctggctgggttttcagatcatctcactgatcaaagctctgacaaggattca
ggaagtggctcacagactgatctaaggaagatcccatcacttcctgctccctcagacttc
ctgtcaaattcaggcaccggcagcggagtgatgcccaagctgatgactcctgatgccttc
atgacaccgagcacttcagtaccagcatctccggggagcagtgccagcagtctgaccatt
gtgacagctataagcagcaactctgactcaacaaacagagctatggaggatgcaagtcag
agtcctaacagggctgacaacagcagtactgggctgccactctctgcctccaccagcagc
ccaagagctgcttccactgtgctacttcccggactcgagagcctgcaggctttggcaacc
cctagtggtcctctggtactcgacagctctcaggttctagatcctccactcctgccacct
ttggcatctccaactagagcccgctcccctgacgtcatctcctcagcatccacagccatg
tcccaggacatgccagagatcgcctctcagaccctgcagcttcagcgtggactagtgtcc
agcttggatcccttgcctctttctgccctccagacagacagcatggcctctgccgcctct
gcactgcacttgttaacctcaccacgctcagccagcaacagcggcttgttggcccttgaa
cttggaggtgcagaagggcctgtgggtggggcagcagagtctgagtccagactgagtcac
acaccatctctgcttgagaatgcgctatcacaggaaaatcctgtgataggaggagggtcc
tcagatggcaacgttagccacacaccatggccagctgctccagatatcaccagagaaacc
aggaacagtctcagggacaacggacttgttgactgttcaagagaggagtcacaggacaga
cacttgagctcaccttaccatcgacgctcatatcacctgccacagaatgacagtcaggac
gctggagccgagcagagtgaccctgatgatgaggtggccagtctggcatcatcctctgga
aactgtggttctcgatcttcacatagactaccggtgaatgattggaaaacctcaccacga
ggatcgccaaagccaaagagaaagatcaagaaagacgacagtgagtcatcacagtccagg
caaatggattctggtcagtttaatgcagaagtacaggacgagttgatgatgctgttgcgt
agccagcagagggagttaactgaactgcggggacagattgaaaccatgcagagctccatt
atggctcaggtggaacatgtcctgacaaatcaccaggagcaagaacaccgcagacttgag
cgagttctggcagagagtcagaatcatcagcagcagcttcaggaacaactcagccagcat
ctcagccatgccctcagctcagctctgaccaacagaatggacaaagtgcttcgggacgaa
atgaagaaaacagtcccacaaacaatctctaagactttggagccagtgacaggccagctg
aacaacacaattgctgctaaactgactgctgtggaggtcaccctgaaggacaatgttggc
aaagtggtgaaatcgaagaacacaacggatgcgattggtcgagcagcagcagaggcgatg
cagggccccatccaggcagcatataaagatgccttccagagcattgtgcttcctgttttt
gaaagaggctgccagtccatgtttcagcaaatcaacgacagcttcaaacaaggcacacaa
gaatacatccagcagcttgagactcatatgaagaacagaaagcagagagaccaggataca
cgagaccccatgattggccagctccagcagatgatcgacaacttccagagctccactgat
cagctgggcaacaacatcacagctaacgtccgggctgaagtccagcatcagatccagatg
atggtgggaaacttgcaggagtctattcttagccatgtgcagcggattgtcaaaggtgag
gtgagcctagcgatgaaggagcagcaggcagtggtcacctccagcatcatgcaggcaatg
aggtcggcggccagcacaccagttcccacagcacatttagactaccagacacagcagacg
aacatcctgcagctcctccagcagggccaactcaatcaggctttccagcaggctctgtca
gcgactgatctgaatttggtcttgtatgtgtgtgagaccatcgactctcagcaggtgttc
ggacaacacccctgccctctaagccagcccgtgctgctttctctcatccagcagctttct
tccaacctcacaactcgctctgagctcaaaatcagctacctggaggatgcggtaatgaat
ctggaccacagcgaccccctgaccagagaccacatgtcgtccgtgctggcccaggtcaga
ccaaagctctttgccttcctgcagcaggacccccacagcccgctcagcaagagggcgcgg
cgcctgatgatgatgctacagggactcgtcaaccactag
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integrated database retrieval system
