Maylandia zebra (zebra mbuna): 101484852
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Entry
101484852 CDS
T02814
Symbol
trpc1
Name
(RefSeq) short transient receptor potential channel 1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
mze
Maylandia zebra (zebra mbuna)
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mze04040
]
101484852 (trpc1)
Ion channels [BR:
mze04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
101484852 (trpc1)
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
MTR4-like_stalk
LHD_TRPY1
TALPID3
Motif
Other DBs
NCBI-GeneID:
101484852
NCBI-ProteinID:
XP_004546844
UniProt:
A0A3P9D4H1
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Position
LG9:7909085..7923297
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AA seq
795 aa
AA seq
DB search
MHISVLPYSLSVVMAALYHGTDASSPDKFLALKDVREVKEETTLDEKLFLLACEKGDYYM
VKKLLEENRHGELNINSVDVLGRDAVTIAIENENLDILQLLLEYGCQATDALLVAIDSEV
VGAVDILLNHRPRRSSKPSIAKLMQRIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQD
ISLPRPHAVGCECTLCNVKNKKDSLRHSRFRLDIYRCLASPSLIMLTEEDPILRAFELSA
DLKELSLVEVEFRTDYEELAKQCKMFAKDLLAQARNSRELEVILNHTSTEDHVDKRGLLE
ERMNLSRLKLAIKYNQKEFVAQSNCQQFLNTVWFGEMASYRRKHTCLKMATVLSVAMLWP
LLSVCYLLVPRSRVGQIIHTPFVKFIIHSASYFTFLLLLNLYSLVYNENKKNTMGPALEM
IDYLLILWIIGMVWSDVKRLWYEGLEDFLEESRNQLSFVMNSLYLATFALKIVAHSKFKD
QEQNRKDWDAFHPILVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQEFGKFL
GLFLLVLFSFTIGLTQLYGKDQKDKENNPPKDCGGIFCEQQSNDAFHTFMGTCYALFWYI
FSLAHVALFVTRISYTEELRSFVGAMIIGTYNIVVVIVLTKLLVAMLHKSFRQIANHEDK
EWKFARAKLWLSYFDDKCTLPPPLNILPSPKTVCYLVTSLSKWICSHTSKGKVKRQNSLK
EWKNLKQKRDENYQKIMCCLVHRYLTSTRQKMQSTDQATVENLNDLRQDLSKFRNEMRDL
LGFRTSKYAMFYPRS
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcagcgtcttgccgtactcgctctccgtcgtaatggcagctctgtaccatggc
acggacgcttcctctccggacaaattcctggccttgaaagacgtgagagaagtgaaagag
gagacgactctggacgagaaactcttcctcctggcatgcgagaaaggtgactactacatg
gtgaagaaactgctggaggagaacagacacggcgagctcaacatcaacagtgtggacgtg
ctgggccgagatgcagtgaccatcgccatcgagaacgagaatctggacatccttcagctg
ctcttggagtatggctgccaggcaacagacgctttgctggtggccatagactcagaggtg
gtaggagccgtggacattctccttaaccacaggccaaggagatcttctaagccctctatt
gctaaactgatgcagcgcatccagaatccagagtattccaccaccatggatgtggctcca
gtcatcctggcagcccacaggaacaactacgagatcctgaccatgctgctcaagcaggac
atctctctcccccggcctcacgctgttggctgtgagtgcacgctctgcaacgttaaaaac
aagaaggacagcttacgccactccaggttccgtctcgacatctaccgctgcctagccagc
ccctctctcatcatgctgacagaggaagatcccatactcagggcctttgagctgagcgca
gacctaaaggagctcagtctcgttgaagtggagttcagaactgactatgaggaactggca
aagcagtgcaagatgtttgccaaagacctgctggctcaggctcgaaactctcgagagcta
gaagtgattctcaaccacacatccaccgaggatcatgttgacaagagaggcttactggag
gagcgcatgaatctcagtcgacttaaactggccatcaagtacaaccaaaaagagtttgtg
gctcagtccaactgtcagcagttcctcaacactgtctggtttggagagatggccagctac
cgacgcaagcacacctgtctaaaaatggccacagttctgagcgtggccatgctttggcct
ctcctttctgtctgctaccttctggtgccacgctcccgtgttggccaaataatccatacc
cctttcgttaagttcatcatccacagcgcctcctacttcaccttcctgctgctgcttaac
ctgtactctctggtctacaacgagaacaagaagaacacgatggggcccgcgcttgagatg
attgattacctgctcatcctctggatcataggaatggtgtggtcagatgtgaagcgtctg
tggtatgaggggctggaagactttctggaagagtctaggaaccagctgagttttgtgatg
aactccctctacttagccacctttgctctgaagattgttgctcatagcaagtttaaagat
caggagcagaacaggaaggactgggatgccttccatcccatcctggtggccgagggactg
tttgcctttgccaacgttcttagttacctgcgacttttcttcatgtacaccacgagctcc
atactgggccctctacagatctccatgggacaaatgctgcaggagtttggaaagtttttg
ggcctcttcctgcttgtgttattctccttcaccattggactcacccagctctatggaaag
gaccagaaagataaggaaaacaatccacccaaggactgcgggggcatcttctgcgagcag
cagagcaacgacgcattccacacatttatggggacctgctatgcactgttctggtacatc
ttctccctggcacacgttgcactcttcgtcacccgcatcagctacacagaggagctgcgc
tcttttgtcggcgccatgatcataggcacctacaacatcgtggtggttattgtgctgacc
aagctgctggtggccatgctccataaaagcttcaggcaaattgctaatcacgaggataaa
gagtggaagtttgcccgggccaaattgtggctcagctactttgatgacaagtgcacgctg
cctccacccttaaacatcctcccttctccaaagactgtctgctacttggtgaccagcctg
agcaagtggatctgttcacacacctcgaagggcaaagtgaagagacagaacagtctgaag
gagtggaagaacctgaagcagaagcgggatgagaactaccagaagatcatgtgctgtcta
gttcaccgctacctgacctccacccggcagaagatgcaaagcacagaccaagctacggtg
gaaaatctgaacgaccttcgccaagacctgtcaaagtttcgcaatgagatgagggacctg
ttgggtttccggacctccaaatatgccatgttctacccaaggagctaa
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