Maylandia zebra (zebra mbuna): 101485017
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Entry
101485017 CDS
T02814
Symbol
six4
Name
(RefSeq) homeobox protein SIX4
KO
K15615
homeobox protein SIX4
Organism
mze
Maylandia zebra (zebra mbuna)
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mze03000
]
101485017 (six4)
Transcription factors [BR:
mze03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
101485017 (six4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_TSHZ3
Motif
Other DBs
NCBI-GeneID:
101485017
NCBI-ProteinID:
XP_004540615
UniProt:
A0A3P9BJP0
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Position
LG19:23651503..23658415
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AA seq
680 aa
AA seq
DB search
MSSSSAGEVTTANDIKRENVKEVDTRECIKLVALDAAELPMERTTPSTDAVRTELLVNAA
SSLAFSPEQVACVCEALQQGGNVDRLARFLWSLPQSDLLRGNESILKAQALVAFHQARYQ
ELYSILENHSFSPSNHTFLQDLWYKARYTEAEKARGRPLGAVDKYRIRRKYPLPRTIWDG
EETVYCFKERSRNALKDLYNQNRYPSPAEKRNLAKITGLSLTQVSNWFKNRRQRDRNPSE
AQSKSESDGNHSTEDESSKGQEELSPRPLSNSSDGVITHGNLPIQTGPLDSGVVIQQIGD
IKMPPGSSSGGLYNGSLVTSNTPSTVFHNGGSSYLHSPGNILFNGLNLGIQPLAFNPLRP
SGGVLLGGSGVDMQMQTGQDKGLGNAEESTLPYASYAGCVNGSEVKLEGVHTMAAQNGGS
SVLTFSSPSGALQLGGYSLVQVPSGVSDSDGSSLLNSDVGLPPLQLSSASSSSTITQQGT
MALNNVAVSSSSGDSFEQQDKLTMASLHHSTVLYSMSNSGQPSIKKEPLEGGVYSSYHHG
LHLDPSGQINYSGSEEISSSRGPASTAEVTAVSSSSPDSEVYTTLTVSTPLMAQTEPSNH
HLQPTEYLGGHEVRGAPSSHLMGPGMNNNYMNLSESKVDGSGSGSMNEMVRAMCGEMEAT
EGKELAKLQTVQMDEDMADL
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttcttctgccggagaagtcacaacagcaaatgacatcaagagggaaaatgtg
aaggaggtggatacgcgggagtgcatcaagcttgtggcgctggacgcggcggagttgccc
atggagcgcacgactcccagcactgacgcggtgcgcactgagctgttggtgaatgccgct
tcctctcttgctttctccccggagcaagtggcgtgtgtctgcgaggcactgcagcaggga
ggcaatgtggaccggctggccaggttcctgtggtccctgccacagagtgacctgctacgg
ggcaacgaaagcatcctgaaagctcaagccctcgtagctttccatcaggctcggtatcag
gagctgtacagtattttggagaaccacagttttagtccgtccaaccacacctttctgcaa
gatctgtggtacaaagcgcggtacaccgaggcggagaaggcgcggggtagacccctgggc
gcagtggacaagtaccgaatccggagaaagtatcctctccccaggactatctgggacggc
gaggagactgtttattgtttcaaggagaggtcgcggaacgcactgaaggatctgtataat
caaaataggtacccgtctccagcggagaaaagaaatctcgccaagataaccggactctcc
ttgacccaggtcagcaactggttcaaaaacaggagacagagagacagaaacccgtcggaa
gcacaatcaaaaagtgaatcagatggaaaccacagcacagaggatgagtccagtaaaggc
caagaggagctgtctcctcgtcctctctccaattcttcagatggggtgataacccacggg
aaccttcctattcagacgggacctctggacagtggggtggtcatccaacagatcggggac
atcaagatgcctcctggatccagcagtggcggtctctacaatggaagtctagtgaccagt
aacacgccctctactgtatttcacaatggtggatcatcttacctccactcacctggaaac
atcctcttcaacgggctcaatttgggcatccagcccctggcatttaatcctctgagaccc
tctggaggggtgctgctggggggctctggagtggacatgcagatgcagacaggacaggac
aaaggactagggaatgctgaggagtccaccctgccatatgcatcttacgctggctgtgtg
aatgggtcagaggtgaagctggaaggggttcacaccatggctgcccagaatggcggctcc
tctgttctgacattcagctccccatcaggcgctctgcagctgggtggctacagcctggtc
caggtaccaagtggagtctctgacagcgatggcagctcattactcaacagcgacgtaggt
cttcctcccctgcagctttcttctgcctcctcttcttcaacaattacacaacaaggtacc
atggctctgaataatgtagcagtgagttcctccagtggcgactcattcgagcagcaggac
aaactgaccatggcatctttgcaccacagtacggttctctacagcatgagcaatagcggc
cagccatccatcaagaaggagcctctggagggaggtgtttattcctcgtaccatcacggg
ctccacttggaccccagtggtcaaatcaactactccggttcagaagagatttcctccagc
cgaggtcccgcctcaaccgccgaggtcactgccgtcagctcatccagcccggactcagag
gtctacaccaccctcactgtcagtacacccctgatggctcaaacagaaccgagcaaccac
cacctccagcccacagagtaccttgggggccacgaggtccgaggggcaccgtcctcacac
ctgatgggccccggcatgaacaacaactacatgaacctttcagagagcaaggtggatggc
tcgggttcaggaagcatgaacgaaatggtgcgggcaatgtgtggggagatggaggctacg
gagggaaaggagctggccaaactacagacagtgcagatggatgaggacatggctgacctt
taa
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