Maylandia zebra (zebra mbuna): 101485101
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Entry
101485101 CDS
T02814
Symbol
polr3a
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1 isoform X1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze03020
RNA polymerase
mze04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
101485101 (polr3a)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
101485101 (polr3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mze03021
]
101485101 (polr3a)
Enzymes [BR:
mze01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
101485101 (polr3a)
Transcription machinery [BR:
mze03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
101485101 (polr3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Bromo_TP
Motif
Other DBs
NCBI-GeneID:
101485101
NCBI-ProteinID:
XP_004561310
UniProt:
A0A3P9AT44
LinkDB
All DBs
Position
LG8:14037714..14062314
Genome browser
AA seq
1402 aa
AA seq
DB search
MVKEQFRETDVAKKISHICFGMKSAEQMRQQAHIQVVSKNLYSQDTKHTPLAYGVLDHRM
GTSEKDRPCLTCGKNLADCLGHYGYLDLELPCFHVGYFKATIGILQMICKTCSRIMLTKE
EKLQFMDYLKRPNLAYLQKRGLKKKISDKCRKRTVCLNCSAFNGPVKKCGLLKIIHEKYK
TTKKVVDAFVSDFLQSFDIAIEHNKLVEPLLTRAQENLNPLVVLNLFRRISEEDIPLLLM
NPEAGKPADLIITRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRMTG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPVHVAKILTYPERVNKANLELMRKLVRNGPDVHPGANF
IQNRHTQIKRFLKYGNREKIAQELRIGDLVERHLIDGDIVLFNRQPSLHKLSIMAHIARV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALILMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTLKDTFFDRSKACQIVASILVGKDERVRISLPHPAIIKPMALWTGKQI
FSLILKPSKECPVNANLRTKGKQYCGKGEDLCHNDSFVVIHNSELMCGSMDKSTLGSGSK
NNIFYILLRDWGQLEAANAMSRLARLAPVYLSNRGFSIGIGDVTPGQGLLKAKQDLLDDG
YKKCDEYIEALDTGKLQQQPGCTAEETLEALILKELSVIRDRAGSACLRELDKSNSPLIM
ALCGSKGSFINISQMIACVGQQAISGSRVPNGFENRSLPHFEKHSKLPAAKGFVADSFYS
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQF
IYGGDGLDPAAMEGKDEPLEFKRVLDNIRAVYTCPDEPALSQNELVLTADAIMKRADFLC
CRDSFLEELTDTGAEKYLEEIKKFIKSISERIKKTRDKYGINDNGTSEPKVLYQLDRVTP
TQLEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVP
RIKEIINASKNISTPIITAHLDVEDDADFARLVKGRIEKTLLGEISEYIEEVFLPDDCFI
LVKLSLERIRLLRLEVNAETVRYSICMSKLRVKPADIAVHGEAVVCVSPRENSKSSMYYV
LQSLKAELPKVVVQGIPEVARAVIHIDEQSSKSKYKLLVEGDNLRAVMATHGVNGSRTTS
NNTYEVEKTLGIEAARSTIINEIQYTMVNHGMSIDRRHVMLLADLMSYKGEILGITRFGL
AKMKESVLMLASFEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKADR
DPSPVKRPLLFDNPDFHLSLIT
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggagcagttcagagagacagatgtggccaaaaaaataagccacatctgcttc
ggcatgaaatctgccgagcagatgcggcagcaggcccacatccaggtggtcagtaaaaat
ctctacagccaggacaccaaacacactccactggcctatggagtgttggaccaccgtatg
ggcaccagtgagaaagacagaccgtgcctgacatgtgggaagaatctggctgattgttta
ggacattatggctacctggatcttgagctgccctgttttcatgttggttatttcaaagcc
acaataggaatcttacagatgatttgtaagacatgttcaaggataatgctgacgaaagaa
gagaagctgcagttcatggattacttgaaacggcctaacctggcctacctccagaaacgt
gggctgaagaagaaaatctctgataaatgccgcaaaaggacagtctgtctaaattgttct
gctttcaatggaccagtcaaaaagtgtggcctacttaagatcatccatgagaagtataag
acgaccaagaaagtggtggatgcttttgtgtcagatttcttgcagtcctttgatattgcc
attgaacacaacaaactggttgagccactactgaccagagcacaggaaaacctgaatcct
ctggtggtgctgaacctgttcaggaggatttctgaagaggacatccctctgctgctgatg
aaccccgaagcagggaaacccgcagaccttatcatcacccgtctccttgtgcctcctctt
tgcatccgaccgtctgttgtcagcgacctcaagtctggcaccaatgaagacgacctcact
atgaagctaacagagataatcttccttaacgatgtcattaaaaagcatcgtatgacagga
gcaaaaacccagatgatcatggaggactgggacttcctccagctgcagtgtgccctttac
attaatagtgaactttctggtatccccctcaatatggcacctaaaaagtggactaggggc
tttgtgcagaggctcaagggaaagcaaggtcgattcagaggaaacctctctggcaaaaga
gtggacttctctggcagaactgtcatttctccagacccaaacctgaggattgatgaggtg
gctgtccctgtgcatgtggccaaaatcctgacatacccagagagggtaaacaaagccaat
ctggagctaatgaggaaactggtccgtaatggtcctgatgttcaccctggagccaacttc
atacagaacagacacactcagataaaaaggtttttaaaatatggaaaccgtgaaaagatt
gcccaggaactgaggattggtgatttggtggaaaggcacctaatagatggagacatcgtc
ctcttcaatcgacagccttctctgcacaaactcagcatcatggctcacattgccagggtc
aaacctcacaggacatttcggtttaacgagtgtgtgtgcacgccatacaacgctgacttt
gacggggacgaaatgaatctccatctacctcaaactgaagaagctaaagctgaggctctt
atcctcatggggaccaaagctaatcttgtcactccaagaaatggcgaacccctgattgct
gctattcaggacttcctgacaggtgcttacctcttgacgctgaaggacaccttctttgac
agatcaaaagcctgccaaatagtagcgtcaatccttgtgggtaaagatgaaagagttagg
atctctctccctcacccggccataataaagcccatggctctgtggacaggaaagcaaatc
ttcagcctaatcctgaagccaagtaaggaatgtccagtcaatgccaacctacgcaccaag
ggcaaacagtactgcggcaagggagaggacctttgtcacaatgattcgtttgtggtgatt
cacaacagtgagctgatgtgtggtagcatggataagagcaccttgggatctggctcgaag
aataacattttctacatcctgctgagggactggggacagctggaggctgccaacgccatg
tctcgcttggcaagacttgctcctgtgtatctctcaaacaggggtttctctattggaatc
ggggatgttacaccaggccagggtctgctgaaggctaagcaggacctgttggatgatggc
tacaagaagtgtgacgaatacatcgaagctttggacacgggcaagttgcagcagcagcca
ggctgcacagcagaagaaaccctggaggctctcatcttgaaagagctgtctgtcatcaga
gaccgagctggtagtgcctgtctaagggagctggacaagagcaacagccctctaattatg
gctctctgcgggtccaaaggatccttcattaatatatctcagatgattgcctgtgtgggc
cagcaggccataagcggctctcgggtacctaatgggtttgagaatcgctccctgcctcac
tttgaaaaacactcaaaactgcctgctgctaaagggtttgtggccgacagcttctattcc
ggtttgacacccacagagttcttcttccacaccatggctggtcgagagggtctggtggac
actgcggtgaaaactgcagagactgggtacatgcagaggcgtctggtgaagtctctggag
gatttgtgctcacagtatgacctcacagtacgcagttcaacaggcgacatcatccagttc
atttatggtggtgatggcctggaccccgctgcaatggaggggaaggatgagccactggag
tttaagagagtcctggacaacattcgggcggtctacacgtgtccagatgagcctgcactg
agtcaaaacgagctggtcctcactgcagacgctatcatgaaaagagctgacttcttatgc
tgtagagacagcttcttggaggaattaactgacacaggcgcagagaagtacctggaggaa
ataaagaaattcattaagagcatttcagaaaggatcaagaagactagagacaagtacggc
atcaatgacaatgggactagtgagccaaaggttctttatcagctggatcgtgtaactcct
acccagctggagaagtttcttgaaacctgcagagacaaatacatgagagctcagatggag
ccaggatcagcagttggggccctttgtgcccagagcattggagagccgggtactcaaatg
acactaaaaacctttcactttgccggtgttgcatcaatgaatatcactctaggagtgcct
cgcatcaaagaaatcatcaacgcctccaagaacatcagcactcctataatcacggctcat
ttggatgtggaagatgatgctgactttgccaggctggtgaaggggagaattgagaagact
cttctaggagagatttctgagtacatagaagaggttttccttccagatgactgtttcatc
ttggtgaagctgtcactggagagaataagactgctgcgactggaggtaaatgcagaaacg
gtgcgttactccatctgcatgtctaaactgcgagtcaaaccggcagacatcgctgtacac
ggggaggcggtggtgtgcgtgtctcctcgagagaacagcaaaagctccatgtactatgtg
ctgcagtcactaaaagcagaacttcccaaggtggtggttcaagggataccggaggttgcc
cgagctgtcattcatattgacgaacagagcagcaagagtaagtacaaactcctggtggag
ggggacaacctgagagcggttatggcgacacatggcgtgaacggaagtaggaccacttca
aacaatacttatgaggtcgagaagaccttgggcattgaggctgctagatccacaatcata
aacgagattcagtacaccatggtgaaccacggaatgagcattgaccgacgtcacgtcatg
cttcttgcagatctcatgtcctataagggtgagatcctgggaatcaccaggtttggttta
gcaaaaatgaaggagagtgtcctcatgctggcttcttttgagaagacagccgatcatctc
tttgatgctgcctattttggacagaaggactcagtttgtggtgtgtctgagtgtatcatc
atggggattccaatgaatattggaacaggactatttaaactgcttcacaaggctgacaga
gatccctctccagtcaaaaggcctctcctctttgacaatccagacttccatttatctttg
atcacatag
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integrated database retrieval system
