Maylandia zebra (zebra mbuna): 101485227
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Entry
101485227 CDS
T02814
Symbol
hbs1l
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101485227 (hbs1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mze03019
]
101485227 (hbs1l)
Messenger RNA biogenesis [BR:
mze03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
101485227 (hbs1l)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
GTP_EFTU_D4
Motif
Other DBs
NCBI-GeneID:
101485227
NCBI-ProteinID:
XP_004541995
UniProt:
A0A3P9CFG1
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Position
LG15:7681897..7707262
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AA seq
688 aa
AA seq
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MSRHRNVRGYNYDEDFEDDDMYGQSVEDDYCCISPATANQFIYSRQERHAPREEPLEEEE
FEDEAVPVSPTVNQNLNPLDQAKLYSCLDHMRTVLGDAVPDSVLTQAAIKCGFDPQRALD
AVLSEDTKTAPVTRSTAEETGTVERANQDKAPQPQRTKQEAVADKAKSRDASHNKLDSEV
LPKVARMTVSGKKQTMGFDVPSTGENGVVVTATEAASKRPETPSKGSNGDEPMTGPTLSR
SSGKARQAINIKAELEKRQGGKPLLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRTMHKYE
QESKKAGKASFAYAWVLDETGEERDRGVTMDVGMTKFETNSKVVTLMDAPGHKDFIPNMI
TGAAQADVAVLVVDASRGEFEAGFEAGGQTREHALLVRSLGVTQLAVAVNKMDQVNWQQE
RFQEIISKLGHFLKQAGFKESDVFYIPTSGLSGENLATRSSVSQLTSWYSGPSLLEQIDA
FKAPQRSVDKPFRLCVSDVFKDQGSGFCVTGKIEAGYIQTGDKILAMPPNETCTVKGITL
HDEALDWAAAGDHVSLTLTGMDIIKINMGCVFCDPKEPIRVCTRFRARVLIFNIEIPITQ
GFPVLLHYQTVSEPATIRKLISVLHKSSGEVLKKKPKCLSKGMNAIVEIQTQRPVSLELY
KDYKELGRFMLRYVGSTIAAGVVTEIKE
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgtcatagaaatgttcgaggttacaactacgatgaagactttgaagatgatgac
atgtatggacagtctgtggaggatgactactgttgcatttcaccagcaacagcaaatcag
ttcatctactcgcgtcaagaaagacatgcaccaagggaagagcctttagaggaggaagaa
tttgaagatgaggctgtccctgtgtcccctactgtcaaccagaatctcaaccctcttgat
caagccaagctgtattcctgtctggaccacatgcggactgtgctgggagatgcagtgccg
gactcagtcctgacccaggcagccataaaatgtggatttgacccacagagggcactggac
gcagtactgtctgaagacactaaaactgctccagttaccagaagtacagctgaagagact
ggtacagtagagcgagctaaccaggacaaagcgccgcaaccacaaagaaccaaacaagag
gctgtggctgacaaagctaaaagcagagatgcttctcacaataaactggactctgaagtt
ttaccaaaagtggcccgcatgactgtctctggaaagaagcagactatgggttttgatgtt
ccaagtacaggggagaacggtgttgtcgtcacagctacagaagctgcctccaaacgccct
gagactccatctaaagggtccaatggggacgagcccatgaccggtcccaccctgagccgt
tcatctgggaaggcacggcaggccatcaatatcaaagctgagctggagaagagacaaggg
ggcaagcctctgttaaatttggtagttataggtcacgtggatgcgggtaagagcacactg
atgggccacctgctatatctgctcggcaatgtcaacaaacgcaccatgcataagtacgag
caggagtcgaaaaaggcaggaaaagcctccttcgcctatgcttgggttctggatgaaacg
ggcgaggagagagacagaggtgttacaatggatgtgggcatgacaaagtttgagacaaac
tctaaagtggtgacactgatggatgcaccaggacacaaagacttcatccccaacatgatc
acaggagctgcacaggctgatgtggcggtgctcgtggtggatgccagcagaggagagttt
gaggcgggcttcgaggctggtggtcagaccagagagcatgccttgctggtgcgttcgctg
ggtgtcactcagctggctgtagctgtcaacaagatggaccaggtaaactggcaacaggag
cgcttccaagaaatcatctcgaaacttggccattttctcaagcaggcaggattcaaggag
tctgatgttttctacatccccaccagcggcctgtcaggagaaaaccttgccaccaggagc
tcagtgtcacagctcacctcttggtactctgggccgagcctgctggagcagattgatgct
ttcaaggcccctcagaggtctgtagacaaacctttcagattgtgcgtctccgatgtcttt
aaagaccagggttcaggcttctgtgttacaggaaagatcgaggctggttatattcaaact
ggagacaaaatactggcaatgcctccaaatgaaacctgcactgtcaaaggaattactcta
cacgatgaggctctggactgggctgcagcaggagaccacgtcagcctgacactcactggc
atggacatcattaagatcaatatgggctgtgtgttctgtgatcccaaagaacctattcga
gtttgcactcgattcagagctcgagtcctcattttcaatatcgagatccccatcacacaa
ggctttccagtactgttgcactaccagacagtcagcgaaccggccaccataaggaagtta
attagtgttctacacaagagcagcggcgaggtcctgaagaagaaaccaaagtgtttgagt
aagggcatgaatgccatcgtggagatccagacccagaggcccgtgtcattagagctgtac
aaagactataaggagctgggccgcttcatgctgcgatatgttggctccaccatcgccgcg
ggggttgtcactgagatcaaagaatga
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