Maylandia zebra (zebra mbuna): 101485290
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Entry
101485290 CDS
T02814
Symbol
smarcal1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1
KO
K14440
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]
Organism
mze
Maylandia zebra (zebra mbuna)
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mze03036
]
101485290 (smarcal1)
Chromosome and associated proteins [BR:
mze03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
101485290 (smarcal1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HARP
SNF2-rel_dom
Helicase_C
ResIII
ERCC3_RAD25_C
DUF7480
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
101485290
NCBI-ProteinID:
XP_004555505
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Position
LG16:19283609..19295301
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AA seq
899 aa
AA seq
DB search
MSNQLTAEQQRMIEENRRKALERRAQRLGQANSTNVKPSVGSKSTSVQTQLPKQSPDPVA
SVQHRETSVSGPKCFPPPLKREPQSQSQQQLPGTSSHFNQSTVCNSASSNQTLTNSIPLV
SQHLRSSVLSPEGSIPVGPAQGKHQLSSSSSGGAVGSFYKQPSKPAQSQVAQLSSNPTST
NVVPAKKPAISVRGRCVPHTEDRFRVEVSYHAGLIAVFKSIPSKNYDPATKMWNFSLEDY
RQLMEEAAAIPSVSMRPLEGMEAVDVTEATSRARDGTALAALLKLCNGWQKPGATLQGQC
ILVSQTKFEVDIGYHVDVIAAFKQMPTKNYDMKTRKWNFSLEDYKRLMDLLSGIAAVEVE
PLPRAIIQAFSARFDGTEARILNVPEADLSSIDPSLTRSLMPFQREGVNFAVSKQGRLLL
ADDMGLGKTIQAICIAAYYKKEWPLLVVTPSSVRFTWAEAFRRWLPSLTPDSINVVVKAK
DSLRSGLINIISYDLLSRMDKQQPGNPFNVLIMDESHFLKNMKTARCKAALPLLKVAKRV
ILLSGTPAMSRPAELYTQILAVRPTLFPRFHEFGIRYCDARQMTWGWDYTGSSNLGELKL
LLEECLMLRRLKSEVLSQLPAKQRKVVTVTIDGINTRTKAALSAAAKQLAKGHRNKMEEK
EALLVFYNHTAEAKLQAIMEYIIDMLECGREKFLVFAHHKLVLDHITTELGKKNVGFIRI
DGSTPSAERQQLCERFQYSAKTCVAVLSITAANMGLTLHSADLVIFAELFWNPGVLIQAE
DRVHRIGQTSSVNIHYLVAKGTADDHLWPMIQEKMNVLEQVGLSEANLSETAENTSFHSK
DPAQRSIMEMFQRSFSADDDMDEAILLEAANDWEDTPPETTSAQHHGTSTGKQWSYKDR
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatcagctgactgcagagcaacagcgaatgattgaggagaacaggcggaaggct
ttagaaagacgagcccaaagacttggacaggctaacagcaccaatgttaagccctcagta
ggctccaaaagtacttcagtgcaaacacagctccccaaacagagtccggatcctgttgcc
tcagttcagcacagagaaacctcagtctcgggaccaaaatgcttcccccctcccttaaaa
agggaaccacagagccaaagtcagcagcagctgcctggcactagcagccacttcaaccaa
agcactgtgtgtaattctgcatcttcaaaccagactcttactaactcaattcctctggta
agtcaacatttgaggagctccgtcttgtctcctgaaggaagcatccccgtggggccagct
cagggcaaacatcaactctcatccagcagctccggaggtgcagttggctcattttacaag
cagcccagtaaacctgctcagagtcaagtggcacagctttcctctaaccccacctctaca
aatgtcgtacctgcaaaaaagcctgccatctctgtaaggggaagatgtgtacctcacaca
gaagaccgtttcagggtagaagtgagctaccatgcagggcttattgctgttttcaagtcc
atcccctcaaaaaactatgatcctgccaccaagatgtggaactttagtctagaagactac
cgacagctaatggaggaagcagctgccattccttcggtgtctatgagacctttggaggga
atggaagcggtggacgtgacggaggccaccagccgagctcgggacggcacggccctggca
gcgctgctcaagttatgtaatggctggcagaagcccggagccactttgcagggccagtgc
attctggtgtcccagacaaagtttgaggtggacattggctaccatgttgatgtcattgca
gcattcaagcaaatgccaacaaagaactacgacatgaaaacaagaaagtggaatttttca
ctcgaggactataagagactcatggatctcctcagtgggatagcagcagtggaggtggag
cctcttcccagggcaataatccaggctttctctgccaggtttgatgggactgaagccagg
attttaaacgtccctgaggcagacctctctagcatcgacccctctctcacccgaagcctc
atgcccttccagagggagggagtcaactttgcagtgtctaaacagggccgcctcctcctg
gctgatgacatgggcctgggaaagactattcaggccatctgtatagcagcttattacaaa
aaggagtggcctttgttggtggtgactccgtcctctgtacgattcacctgggctgaggcc
ttcagacgctggcttccctccttgactcctgacagcatcaacgtagtggtgaaggccaaa
gacagtctgcggtctggtttgatcaacatcatcagctatgacctactgagcaggatggac
aagcagcagccaggaaatcccttcaatgttctcatcatggatgagtctcactttctgaaa
aacatgaagactgctcgttgtaaagcagcattgcctctgctgaaggtagcgaagagagtg
attctcctgtcggggacccccgccatgtccagaccggctgagctgtacactcagattttg
gccgtcagaccgacactctttccacgcttccatgagtttgggatccgctattgtgatgcc
agacagatgacctggggctgggactacacaggctcttctaatcttggagagctgaagctg
ttgttggaggagtgtctgatgctgcgccgtctcaagtctgaggtcctttcccagcttccc
gctaaacagcgcaaggtggtcacggtgaccatcgatgggatcaacacccgcacgaaagct
gctctgtcagctgcagccaagcagctggccaaaggacatcgcaataaaatggaagagaag
gaagccctcctcgtcttttataaccacacagccgaagccaagctacaagccattatggag
tacatcatagacatgctggagtgtgggagggagaagtttctggtgtttgcccatcataaa
ttagtcctggatcatatcacgaccgagctggggaaaaaaaatgtcggttttatccgcatt
gatgggagcactccatcagcggagcgacagcaactgtgcgaaaggtttcagtactcagcc
aagacctgtgtggcggtactgtccatcactgcagctaatatgggcctaaccctgcactct
gcagacctggtgatcttcgctgagcttttctggaaccccggggttctcattcaggcagag
gatagagttcatcgtattggacaaaccagcagtgtgaacattcactacctggttgccaag
ggaactgctgatgatcacctatggcccatgatccaggaaaagatgaatgtcctggagcaa
gtgggtctttctgaggcaaacctctcggaaactgcagaaaacaccagcttccactccaag
gatcctgcccagaggagcatcatggagatgttccagagatcattctctgcagatgacgac
atggatgaggccatcttgttggaggccgcaaatgactgggaggacactccgcccgaaacc
acgtctgctcagcaccacggcaccagtacgggcaagcagtggagctacaaagaccgatga
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