Maylandia zebra (zebra mbuna): 101485559
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Entry
101485559 CDS
T02814
Symbol
sh3rf1
Name
(RefSeq) E3 ubiquitin-protein ligase SH3RF1
KO
K12171
E3 ubiquitin-protein ligase SH3RF [EC:
2.3.2.27
]
Organism
mze
Maylandia zebra (zebra mbuna)
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mze01009
]
101485559 (sh3rf1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mze04121
]
101485559 (sh3rf1)
Enzymes [BR:
mze01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101485559 (sh3rf1)
Protein phosphatases and associated proteins [BR:
mze01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
101485559 (sh3rf1)
Ubiquitin system [BR:
mze04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101485559 (sh3rf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_9
SH3_1
SH3_2
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_5
zf-C3HC4_3
zf-C3HC4_4
zf-RING_4
zf-RING_11
Prok-RING_4
zf-rbx1
zf-Nse
Motif
Other DBs
NCBI-GeneID:
101485559
NCBI-ProteinID:
XP_004557151
LinkDB
All DBs
Position
LG23:complement(8285191..8332700)
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AA seq
862 aa
AA seq
DB search
MDESVLLDLLECPVCLERLDASAKVLPCQHTFCRRCLQGILGSRGELRCPECRTLVDCAV
DELPSNILLVRLLDGIKQRPRRVGPGAAVCTNGTSGAMARAHGSGSRDQGTPGAQPQRAQ
AKSTLVRGVPQLPCAKALYNYDGKEQGDLKFSKGDIIILRRQVDENWYHGEMGGVHGFFP
TNFVQVIKPLPQPPPQCKALYDFELKDKEADKDCLPFSKDDILTVIRRVDENWAEGMLGD
KIGIFPISYVEFNSAARQLIELDKPSDSSGDSGEGASSGPQTNGAHRVGEKKNSKKRHSF
TSLTMSHKPMLAPPPQRHSMEISGPVLISSSNPTAAARIGEISGGLSCSAPSQVHICTTG
LIVTPPPSSPVTTATVFTFPSETSYTSIPVDALPPPPPPPPQSSVGGAAYSLAAGQRPSP
SISDQSGRQRPTVYVAMFPYTPRKEDELELRKGEMFLVLERCQDGWFKGTSMHTGKIGVF
PGNYMSPVSRTASGSSQPKVPLSLCTQAGRGVTIVSPSSAPLGAIVSGPDFNKPLTVCPA
VAPANSQPAAVVTTAQTATGQQPKVSLHVTSQMTVNQARNAVRTAACHSQDRPTAAVTPI
QSATPVTYLPHLAVCSQPGSSPAQGCTRVGVAMGCAAASLTPPNVSAASLDSDALRPVPV
LAVPVNPGSNSALNPTSNNAAPACRLDKDIKREKKSLLKLLSSNKKKSRPSPPSSPTLEA
EQAAAAGELLHGAVGLDTSPPSGPASCLDSEPAAASASSSSSSSVPESSHRKSSPLDGCV
PIAPPPRQPCSSLLSQQHDARPIICERYRVVVSYPPQSEAELELKEGDIVFVHRKREDGW
FKGTLQRNGRTGLFPGSFVDII
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atggacgagtccgtgttgttggatttgctcgagtgccccgtttgtctcgagcggctagat
gcctcggcaaaggttcttccttgtcagcacaccttctgccggcgttgcctccaaggtatc
cttggctcacgcggggagttgcgctgcccagagtgccggacgttggtggattgtgccgtg
gatgaacttcccagcaacatcctacttgtgcggctcttggatggaatcaagcagaggcca
cggagggttggtcctggggcggcagtctgcacaaatggtacatctggagccatggccagg
gcacatggaagtggatctcgggaccagggcaccccgggagcacaaccccagcgagctcag
gctaagagcaccctcgtccggggcgtaccccagctcccgtgtgccaaggcgctctacaac
tacgatggcaaggaacaaggagacctcaaattcagcaagggtgacattatcatcctgcgt
cgacaagtggatgagaactggtaccacggtgagatgggtggagtccacggctttttcccc
accaactttgtccaagttattaagccgctgccacagccgccacctcagtgcaaagctctc
tatgactttgagctcaaagataaagaggccgacaaggattgtctgcccttctcaaaggac
gatatcctgactgtgatccgcagagtagatgaaaactgggccgagggaatgctgggagat
aaaattggaattttccccatctcgtatgttgagttcaattcggcagctcggcagcttata
gagttggacaagccgtccgactccagtggagactctggggaaggggcctcctcagggcct
cagacaaatggtgcccaccgggtaggggagaagaagaacagcaagaaacgacattctttc
acctctctcaccatgtcgcacaaacccatgctagcacctcccccccagcgccactccatg
gagattagcggtccggtcctcatcagctccagcaaccccacggcagcagctcgaatcgga
gagatcagcgggggcctctcctgcagcgcaccttcacaggtacatatttgcacaactggc
ctaattgtgaccccgcctcctagcagtcctgttactacagcaaccgtcttcacatttccc
tcagagacgagctacacatccatccctgtggatgctctcccaccacccccaccgcctccc
ccccagtcctccgtcggtggagctgcatattcgctggctgccggacagagaccctccccc
agcataagcgaccaaagtgggagacaaagacccacagtctatgtggcaatgtttccctac
actcctcgaaaggaggatgaactggagctgaggaaaggagagatgtttctggtgctggaa
cgctgtcaggatggctggttcaagggcacgtccatgcacacgggcaagattggagtgttt
cctgggaactacatgagccccgtcagcaggacagcgtctgggagctctcagcccaaagtg
cccttgagtctgtgcactcaggcaggcagaggtgtcaccatcgtcagcccttcttctgct
ccccttggagccattgtttcagggcctgattttaacaaaccgctgactgtatgccccgcc
gttgcacctgccaactcccagcctgcagcggtggtcaccacagctcaaacagccacaggc
caacagccaaaagtctcactgcacgtcacctcccagatgaccgtgaatcaggctcgcaac
gcggtcaggacagctgcatgtcacagtcaggacaggcccacagcagcagtgacaccaata
cagtctgcaacacccgtgacgtatctcccacacctcgcagtgtgctcgcagcccgggtca
agccctgcacaaggctgcactcgagtaggggtggcaatgggctgcgcagctgcctccttg
accccacccaatgtcagcgctgcatctttggatagtgacgctttgagacctgtacctgtc
ctcgctgtgcctgtcaaccctgggagcaactccgctctcaatcccacatctaacaatgca
gctcctgcctgcagactggataaagacatcaagagagaaaagaaaagtcttctgaagctg
ttgtcctccaataagaagaagtctcgcccttcgcccccctcctctcctacccttgaggct
gagcaggccgctgctgctggagagctgctacatggcgctgtgggccttgacacctcccct
ccctctggcccagcgagctgcctggactctgaacctgctgctgcttctgcctcgtcatcc
tcctcctcctcagtcccagagtcctcccatcggaagagcagtccccttgatggatgtgtt
cctatcgctcctcctccccgccagccctgctcctctcttttatctcaacagcatgacgca
cgtcccatcatatgtgagaggtacagggtggttgtatcatatcctccccagagcgaagca
gagctggaacttaaggagggcgacattgtgtttgttcacaggaagagggaagatggctgg
ttcaaaggcacgctgcagaggaatggcaggacgggactgttccctggcagctttgtagac
atcatttaa
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