Maylandia zebra (zebra mbuna): 101485607
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Entry
101485607 CDS
T02814
Symbol
upf3b
Name
(RefSeq) regulator of nonsense transcripts 3B
KO
K14328
regulator of nonsense transcripts 3
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze03013
Nucleocytoplasmic transport
mze03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101485607 (upf3b)
03015 mRNA surveillance pathway
101485607 (upf3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mze03019
]
101485607 (upf3b)
Messenger RNA biogenesis [BR:
mze03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
101485607 (upf3b)
mRNA cycle factors
P-body specific factors
101485607 (upf3b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
101485607
NCBI-ProteinID:
XP_004545823
UniProt:
A0A3P9BKJ2
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All DBs
Position
LG2:29984015..29988466
Genome browser
AA seq
459 aa
AA seq
DB search
MKEDKENNRPKEKRVEIKCEDGEKTEKSKEKKEAMTKIVIRRLPPSLTKEELEEQLQPLP
EVDYLEFFSNDTSLYPHLFARAYINFRNQEDIVLFRDRFDGYVFIDSRGQEYPAIVEFSP
FQKTAKKRSKKKDAKCGTIVEDPDYKRFLEYYNGDDEKLTSTPEILLEEIEAKSKELVAK
KTTPLLDFLKNKQRLREEKKEERRRRELERKRLRDEERRKWREEERRKRKEAEKMKKLEK
PLEKDKDQAKDEPKIKLLKKPERGDEGNPEKPKEKSKKPEKPNKEDRSLGGSDHKRRQNI
EHKEDRGRKGDEDGRKEFRERDTDRDRDREREKERRQKERERFKRQDEERRRRREHQDGD
NSFKKREEEVKKDKPLEKKKGENMPDSPHSEKPEKPAKDNKKEDGGKRERLRNKDRPAIQ
LYQPGARSRNRAAGGGAESNSADRKPDTEARKVAEKEDD
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaagacaaagaaaacaatcgaccgaaggagaaaagggtggagataaagtgtgaa
gatggagaaaagacggagaagtccaaggaaaagaaggaggccatgacaaagattgtgatc
agacgactaccaccaagtctcaccaaagaggagctggaggagcaactgcaaccgctccca
gaggtggactatttggagttcttctctaacgacacgagcctttaccctcacctctttgca
agggcttatatcaacttcagaaaccaagaggatatagtcctcttcagagatcgctttgat
ggatatgtattcattgacagcagaggtcaggagtatcctgccattgtggagttttcacct
tttcaaaaaactgccaagaaaagaagtaaaaaaaaggatgcaaagtgtggaacaattgtt
gaagatccagattacaaaaggttccttgaatattacaacggggacgacgagaagctaacg
tctacacctgagatcctgttggaggagattgaggctaaatcaaaggaactcgttgctaaa
aaaacaactcctctgctggacttcctgaagaataaacagagactcagggaggagaagaaa
gaagagcgaaggaggagggaactcgagcgcaaacgtctgcgcgatgaggagcgtcgtaag
tggagggaggaggagaggaggaaacgcaaagaggcagagaagatgaagaagctcgagaaa
ccgctggagaaggacaaagaccaagctaaagacgagccaaagataaagctcctgaagaag
ccagagagaggagatgaaggcaacccggagaagccaaaagagaagtccaagaagccagag
aagccaaataaagaggacagatctttgggaggttctgatcataagagacgtcagaacatc
gagcacaaggaggatcgaggaaggaaaggggacgaagatgggcggaaggagtttagggag
cgtgacacggatcgagacagagaccgagagcgcgagaaggagcgtcggcagaaagagagg
gaacgcttcaagcgacaggatgaggaacgtcggagaagaagggaacatcaggatggagat
aactccttcaagaagcgggaggaggaggttaaaaaagataaacccttggagaagaagaag
ggtgaaaacatgccagactccccacacagtgagaagccagagaagcctgctaaggacaac
aagaaggaggacggtgggaaaagagagcggctacggaataaggaccggcctgctattcag
ctgtaccagccaggtgcaagaagccgcaaccgtgctgcaggaggaggagctgaatccaac
tctgctgacagaaagccagataccgaggctaggaaagtggctgagaaagaagacgactga
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