Maylandia zebra (zebra mbuna): 101485819
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Entry
101485819 CDS
T02814
Symbol
topbp1
Name
(RefSeq) DNA topoisomerase 2-binding protein 1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
101485819 (topbp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mze03032
]
101485819 (topbp1)
03400 DNA repair and recombination proteins [BR:
mze03400
]
101485819 (topbp1)
DNA replication proteins [BR:
mze03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
101485819 (topbp1)
DNA repair and recombination proteins [BR:
mze03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
101485819 (topbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
TopBP1_BRCT0
BRCT_2
RTT107_BRCT_5
BRCT_TopB1_SLF1
ECT2_BRCT0
Motif
Other DBs
NCBI-GeneID:
101485819
NCBI-ProteinID:
XP_012774795
UniProt:
A0A3P9CS10
LinkDB
All DBs
Position
LG9:complement(10774616..10788556)
Genome browser
AA seq
1514 aa
AA seq
DB search
MSKAEKVAFIVKFVESEGSKKDCAAKAYETILELQSEKYLKTITEDDVLRMDKKDKSLFV
FTSFTSPAFLHCKKLGCRIVSPLVVLYCLQQQRCVPKAEKPVYNMAMADVTICCTSMDRA
IREELMDLVQLMGGWAYSDLNVSVTHLIAEEVGSKKYLVAASLSKPILLPTWVKACWEKS
QDSLFRYTDLPLEDYLCPVLRGCSVCVTGLSSTERKEVQRLCEQHGANYTGQLKMNECTH
LIVNEPTGQKYECARKWNVYCVSLHWLFDSIVKGYCQDESRYTVERNASKTTRPHTSTPT
ATSKKDEGPSLLGLSNISVNTSRTINDTALTNNSTVSHLEAPDPIESLDLTVCPADDLLD
GCKLYLCGLPGNKLEKLRRLVNAAGGLRFNQPSEELSHVVMGELDQDLNNFLSKATHRPH
VVTVKWLIDSFSKGTLLPEASYLHPDCLPPAPADVVVPGYHTPKSRISTGPPAGSPSTPG
RKKADEDLLSQYMDDDPTVIDMPPPPPAESKSRKSISTTAELQPESWVPNRTNGTESTLQ
EASEAGLFFGKRFLLVGFGTEAETQLSLLVTEHGGKVLMGRSRVVADYAVVPLLGCSVEA
TVEEVVTDTWLVMCVEKECVLQLSSHPLFTPVPVMDGQFPLKDCVLSVSQFTGAERESLV
ELAKHLGADVQDYFVRLANQKKGMLASTHLVLQSPEGTKYQAAKKWGLPAVTMHWILESA
RTGKRAEEGRFLVDLPPSPERDEESFVGGSQKQIMPPAARSSPEIPLLGPRSGKAVTPLD
LGRFQSKVFRSVLDEMKPKEDISTPKQNQEGGRRNPLQNEASLQLDTPSRFLNRDQLFRP
SFNVKDALGTMETPGGASKPGKRIETPLTDVINRNLKVALANSTRNNVSEMQAVSASPQL
AKTAEKESPRKEAGPLNGVVVCVGKKLSKMQSELNAIAASLGADFRWACDDTVTHYIYQG
RVGDNTREYRGVKERGLHVVSQYWLQACADEQRHVPESLYPFTYNPKMSLNLSQVPSNSQ
RSPPVTRTQRKDIRETKEDEFVHNPTQEAATQRRVSDGSTDQEEMNDSTERRETLEMREN
LQRQLQEIMSATKLTTGRRTSVRLARMGSGGADLGPHTPEGSRVGRSGNRRTLEALRVPR
EAAMDMNTEPSQSEQIVWDDPTAREERAKLADNLQWPGSPSQHSEPLAPPPTADSGPQLR
DSMTDSELVEMAACDVIEQHMNKKVLTPPPEEPENDVLTPKAPSIAFPLANPAVAPEPQE
KKEEKQPPRFQLSSLSPQERIDYSHLIEELGGVVLDKQSFDPSCTHIIVGTPLRNEKYLA
AMAAGKWILHRSYLEACRSVGLFIQEEEFEWGNSSILDALPSITSQQKRLALAGMRWRKS
LQGHSEHEGAFSGWTVMLNIDQSRESGFRRLLQSGGAKVLPGPSPSMYKEATHLFADFSR
LKPGDFRVDVLEATSQGVTCLKPEYIADYLMQEPTPPIELYHLTEAPSEEAPGTPSRKRK
AAAETSRLKKSRVN
NT seq
4545 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaggcagaaaaagtagccttcattgtgaagtttgtggaaagtgaaggatcaaaa
aaagactgtgctgccaaagcttatgagaccattttggagctgcaatctgaaaaatatttg
aaaaccatcacagaagatgatgttttgcgcatggataagaaggacaagtctctgtttgtg
ttcaccagttttacatctccagcctttcttcactgcaagaagcttggttgcagaatagtg
agtccactggtggtgttgtactgcctgcagcaacagcgttgtgtccccaaagcagagaag
cctgtctataacatggccatggctgatgtcaccatttgctgcaccagtatggacagagca
atacgggaagagctgatggatctggtgcagctcatgggtggatgggcctattcggatcta
aacgtatctgttacacacctgattgcagaagaggtgggcagtaaaaagtacctggtagca
gccagcctcagtaaacccatcctgttgcctacgtgggttaaagcctgctgggagaaatca
caggatagtcttttcagatatacagacctgcccttagaggactacctttgccctgtgctg
cgtggctgtagtgtttgtgtgacaggtctgtccagcacagaacgcaaagaagtacaaaga
ctttgtgagcagcatggggccaactacaccggtcagctcaaaatgaatgagtgtacacac
ctcattgttaatgaaccaacaggtcagaagtacgagtgtgctcggaagtggaatgtgtat
tgcgtgtctttgcactggctctttgacagcatagtgaagggctactgtcaagatgagagc
aggtacactgtggagcgcaatgcttcaaaaaccactcgaccacacacttccacacctact
gctaccagcaagaaggatgagggtccgtcactgttgggcttgagcaacatttctgtgaac
actagcagaacaataaacgacacggctctcaccaataacagcactgtcagccacctggaa
gctccagaccccatagagagtctggatcttactgtgtgccctgctgatgatttattggat
ggctgtaagctgtatctgtgtggcctgccagggaataaactggagaagttacggcgtctt
gtaaatgctgcaggaggtctgcgcttcaaccaacccagtgaggagctctctcatgtggtc
atgggcgagctggaccaggacctcaataattttctttccaaagcaactcacaggccccat
gtagtaacagtaaagtggctaatagacagcttctcaaagggcactctgctcccagaagcc
agctacctccaccctgactgtctgcctcctgctccagctgatgtagtggtgccgggttac
cacactcccaaatcccggatctcaactggtccacctgctggcagcccgagcactccgggg
agaaagaaagcagacgaggatctactgtcacagtacatggatgatgaccctacagtgatt
gatatgccgcctccaccaccagcagagagtaaaagcaggaagtccattagtacaactgca
gagctccaacctgaatcctgggtaccaaaccgcactaatgggacagaatccaccctgcag
gaagccagcgaggcaggactgtttttcgggaaacgtttccttcttgtggggtttggtacg
gaggcagagacacagctctctctgctggtgacagaacatggaggcaaagtgctgatgggc
cgctcccgggttgtcgcagactatgctgtggtccctctcttggggtgctcagtggaggcc
acagtggaagaggtggtcactgatacctggctggtcatgtgtgtggagaaggagtgtgtc
ctgcagctgtcctcccaccctttgttcactcctgtcccagtgatggacggacagtttcct
ctcaaagattgcgtcctctctgtcagccagttcaccggagcagagagggagtctttggtg
gagcttgccaagcaccttggagccgacgtccaggattattttgtgcgcctggccaaccag
aagaaaggcatgctggccagcacgcatctggtgctgcagagccccgagggcacaaagtac
caggcagcaaagaagtgggggcttcctgctgttaccatgcactggatactagagtctgct
cgaactgggaagagagcagaggagggaagatttttagttgatctgccaccctcaccagag
agggatgaagagagttttgtaggtggttcgcagaaacagattatgcctccagcggctcgt
tcctctccagaaatccctttgttgggtccccggagcggtaaggctgtcactcctctggat
ttaggccgctttcagagcaaagtgttccgatctgttttggatgagatgaagcccaaagag
gacatcagcaccccaaaacaaaaccaggagggtggcagaaggaacccactacagaacgag
gcctccctgcagctggacaccccttctcgtttcctcaaccgagaccagctcttcagaccc
tcttttaatgtcaaggatgcacttggaactatggaaactccgggtggggcatcgaaacca
gggaagaggattgagactccactcactgatgtcatcaacaggaacctgaaagtagcgctg
gctaatagcacccgcaataatgtctcagagatgcaagcagtctctgccagtccccagctt
gcaaagacagctgagaaggagagtccacgaaaagaagccgggcccctgaatggtgttgtg
gtctgcgtgggaaagaaactgagcaaaatgcagagtgaactaaacgccatcgctgcctcg
cttggagccgacttcaggtgggcttgtgacgatacagtaacacactacatttaccagggc
cgtgtgggggacaacacccgggaatacagaggagtgaaggagagagggctccatgtggtc
tcccagtactggttgcaggcgtgcgctgatgagcaaaggcacgtcccggagtctctctat
cctttcacctacaaccctaagatgagtttaaacctgagccaggtgcccagcaactctcag
aggtcaccacctgtaacacgaacacaacgcaaagacatcagggagacgaaggaagacgag
tttgtgcacaatcccacacaagaagctgcaacccaacgccgtgtgagtgatggaagcaca
gaccaagaagagatgaatgatagcacagaaaggagggaaacgctagagatgagagagaac
ctgcaaagacaactgcaggagatcatgtcagccactaaactgacgacagggaggcgtacc
tcagtcaggctcgctaggatgggatccggaggggcagacttgggcccccacacacccgaa
gggagcagagttggacggagcggtaatagacggactctagaagctctgagggttcctcga
gaagcggctatggacatgaacacagagccatcccagagtgaacagatagtttgggatgac
cccacagccagagaagagagggccaagctcgctgataatttacagtggcctggaagccca
tcgcagcactctgagcccctcgctcctcctccaactgcagacagcggaccacagctaagg
gactccatgacggactcagagctggtagagatggctgcttgtgacgtcattgagcagcac
atgaacaagaaagtcctgacgcctcctcccgaggagccagagaatgacgtcctcactcct
aaagctcccagcattgcttttcctctcgccaaccccgcagtagcaccagaaccacaggag
aagaaggaagaaaaacaacctcccagatttcagctgtcctccctcagcccccaggagcgc
attgattacagtcacctcatagaggagcttggtggtgtagtcttggataagcagtctttt
gaccccagctgcacacacatcatcgtcgggacacccctgcgtaatgagaagtacctggca
gcgatggcagctgggaaatggatcctgcaccgctcgtacctggaggcgtgccgctctgtg
ggtctcttcattcaggaggaggagtttgagtggggcaatagctccatccttgacgcattg
ccctccatcacctcccaacaaaagagactagcgttagccggcatgcgctggagaaaaagc
ctgcagggtcactctgaacacgagggcgccttcagtggatggacagtcatgctgaacatc
gaccagagcagagaatcgggattcaggcggttgctgcagtctggcggggcgaaggtcctt
cctggtccctccccatccatgtacaaagaggccacacatctttttgcagacttcagtcga
ctcaaacccggagacttcagagttgatgttttagaggctacctcacaaggagtcacatgc
ctgaagccagaatacattgcagactatctcatgcaggagccaacaccacccatcgagctg
taccacctgactgaagctccctctgaagaagctccaggcacaccgtcacgtaaacgtaaa
gcagcagcagagacctccaggctgaaaaagagccgtgtgaactga
DBGET
integrated database retrieval system
