Maylandia zebra (zebra mbuna): 101486077
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Entry
101486077 CDS
T02814
Symbol
tgfbrap1
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
101486077 (tgfbrap1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mze04131
]
101486077 (tgfbrap1)
Membrane trafficking [BR:
mze04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
101486077 (tgfbrap1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
Clathrin
TPR-S
DUF7742
Motif
Other DBs
NCBI-GeneID:
101486077
NCBI-ProteinID:
XP_004543408
UniProt:
A0A3P9B2M4
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Position
LG1:23673798..23683785
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AA seq
872 aa
AA seq
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MSVKAFELVPAVERDLLMGDKARINIECIECCGKHLYVGTNDCFIHHFLLAEVASSKGKP
GYLAQKLLHKYLGLKKPVAELRAASALERLIVLCEGLVFLVDMVTLETVPSAGGGGAKIR
GVASFCVNENPVNADPFCVEMGVLSSKRRTVQIYMVYEDRVQLVKELTTPEQPCAVSLDG
YFLCLALTTQYMILNYNTGASQDLFPYNSEERTPIVKRIGREEFLLAAPGGLGMFANAEG
VSQRAPVRWSESVIGAAVCFPYVVALDESFITIHSMLDQQLKQTLSFRDGHILQNFEGKV
ILASTKAVYVLVPLPLERQIQDLLANHRVEEALILTEGAQRNIPKDKFQNLHKRILQQAG
FIQFGQLQFLEAKEHFRKGQLDVRELISLCPLLLPASSSFTRCHPPLHEFADLNHLAQGD
QEKVLRCKKFLISYLGEVRSTEVVNGCREDVDTALLKLYAEQDHDSLLDLLASDNACVLA
DSVPWLEKYHKYFALGLLYHYNGQDSAALQLWIRVADGELQDPTRSDLFEYIVDFLCTSS
NVDLVWKYADWALRKDPIIGVHIFTKRHTSKDQPELNPDDVITYLGKHNQALLLYLENLV
LEKRVQKEKFHTHLAVLYLERVLSLMSQSPKDEEQLTKARERLQALLRESDLYRVQFLLA
KMENCEELLLERATLHGKLEEHDKALHILVHQLRDFPSAEAFCIWASSSRDSAYRQQLFH
LLLGVYLDGSPPGQSGDSGELEMAAVDLLNRHGEVFDAVRVLRMLPEGWSLQLLRPFLGR
AIRASMHACRTSRIALGLAHSENLQLLHDRLKECKRPVFVSEKKGCHLCHNTFSEPSVVC
LPGGVPVHTHCVAQRVRDSPTKRQLTNSSKHT
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgaaggcttttgagctagtccccgctgtggagcgagatctcctaatgggcgac
aaagctcgcatcaacattgagtgcattgaatgctgtggaaagcacttgtacgtgggcacc
aatgactgcttcatccaccactttctgctggctgaggtcgcctcctctaaagggaagccg
ggttacttggctcagaagttgctgcacaaataccttggcctcaagaaacctgttgctgag
ctgcgggctgcttctgctctggagcgtctcatagtgctctgtgaagggttagtgttcctc
gttgacatggtgacgctggaaacggtgccctcggcaggtggaggtggagccaagatcagg
ggcgtggcatcattttgtgttaacgagaacccggtgaacgccgatccgttctgtgtcgaa
atgggcgtgctatcctccaaacggcggacagtccagatttacatggtgtacgaggacaga
gtgcagctggtgaaagagttgacaacgcccgagcaaccctgtgctgtcagtcttgacggt
tacttcttgtgcctggctcttaccacacagtatatgatcctgaactacaacacgggagcc
tcccaagacctcttcccttacaacagcgaggagaggacacccattgtaaagagaattggc
agggaggagtttctcttagcagcacctggtggtctgggaatgtttgccaatgcagagggt
gtatctcagcgagctccggtcaggtggtcagagagcgtgattggtgccgctgtgtgtttt
ccatacgtggtggcgttggacgagagcttcatcaccatccacagcatgttggaccaacaa
cttaaacagaccctttcattcagggatggccatattttgcaaaactttgaagggaaggtc
attctggcttctactaaggccgtgtacgtcttagtacctctgccgctagaaagacagatt
caagacttgctggccaatcacagagtggaggaggcgctcattctcacagagggagcgcag
agaaatatccccaaagacaagttccagaatttgcacaaacgaatcctccagcaggccgga
ttcatacagtttggccagcttcagtttctggaagcgaaagaacacttccggaagggtcag
ctggatgtgcgggagctgatatctctctgcccgttactgctaccagcttcctcttcattc
acgcggtgccaccctcctctccacgagtttgcagatctcaatcatctggcacagggtgac
caggagaaagtgttgcgatgcaagaagttcctcataagttatttaggagaggtacgaagc
acagaggtggtgaacggctgtagagaggatgtggacactgcactgttaaagctgtatgcc
gaacaggaccacgacagccttttagacctcctggcttcagacaatgcctgcgtgctagca
gacagtgtcccatggctggagaaatatcacaaatattttgcgctggggctgctctatcat
tataatggtcaggattcagcagcacttcagttgtggattcgtgtggcagatggggagctg
caagaccctactagatctgatctttttgagtacattgtggactttctctgcacctcctct
aatgtggaccttgtatggaagtatgcagactgggccctacggaaggatcccatcataggt
gtccacatcttcactaagaggcataccagtaaagaccagccggaattgaaccctgatgat
gtcatcacttacctgggaaagcacaaccaggcgcttctgctctacttggagaacctggtg
ctggagaaaagggtgcagaaggagaagttccacacacatctagctgtgttgtacttggag
agggtgttatctttgatgtcacagtctccaaaagatgaggaacagctgaccaaagctagg
gaaaggcttcaagccctgctcagggagtccgacctataccgtgtacagtttcttttagct
aaaatggagaactgtgaagaactgctgctagagcgtgcaacactacatggaaaactagag
gagcatgacaaagcgctgcacattctggtgcaccagctcagagacttcccgtccgccgag
gccttctgcatatgggcctcttctagtagagattcggcgtaccgacagcagctctttcac
ctgctgctgggggtgtatttggatgggagccctcctgggcaatcgggagacagcggagag
ctggagatggcggcagtggatctcctaaatcggcacggggaggtgtttgacgcggtccgt
gtcctgcgaatgctgccagaaggctggtcacttcagctgctgcgtccctttctgggtcga
gccatcagggccagcatgcacgcctgccgcacgtccaggatcgctttagggctcgcacac
tctgaaaaccttcaactgctgcatgataggttgaaagagtgtaagagacccgtctttgtg
tctgaaaagaagggatgccacctgtgccacaacaccttcagcgagcccagcgtggtgtgt
ctgcccggtggagtgcctgtccacacccactgtgttgcccagagagtaagagactctccc
acaaagagacagttgactaatagcagtaaacacacgtga
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