Maylandia zebra (zebra mbuna): 101486180
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Entry
101486180 CDS
T02814
Symbol
vps53
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog isoform X2
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
mze
Maylandia zebra (zebra mbuna)
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mze04131
]
101486180 (vps53)
Membrane trafficking [BR:
mze04131
]
Protein recycling
Others
EARP complex
101486180 (vps53)
Endosome - Golgi transport
Tethering complex
GARP complex
101486180 (vps53)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
GrpE
COG4_N
COG5_N
FBF1
hAT-like_RNase-H
Syndetin_C
COG3_N
Laminin_II
PsaD
Sec8_N
NBD94
Motif
Other DBs
NCBI-GeneID:
101486180
NCBI-ProteinID:
XP_004543885
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All DBs
Position
LG14:16920348..16946971
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AA seq
830 aa
AA seq
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MMEEEEFEFAEDLEAILHLTPEVQLAIEQVFPSQDPLDRADFNAVEYINTLFPTEQSLAN
IDDVVNKIRLKIRRLDDNIRTVVRGQTNVGQDGRQALEEAQIAIQQLFGKIKDIKDKAEK
SEQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLVGGVDSLEAMTRKRQYGEVANLLQG
VVNVLEHFHKYMGIPQIRQLSERVKAAQSELGTQILADFEEAFPSQGSKRPGGPSNVLRD
ACLVANVLDPRIKQEIIKKFIRQHLSEYLVLFQENQDVAWLDKIDRRYAWIKRQLLDYEE
KYGRMFPEEWCMTERIAVEFCHITRAELAKVMRTRAKEIEVKLLLFAIQRTTNFEGLLAK
RFTGCTLTDVPGKRPDSPLDPTNPFLEDEPGEEAGTEKDEDLTKPKKPKAPDNPFHGIVS
KCFEPHLYVYIESQDKNLGELIDRFVADFRAQGPPKAGTEEGGAVLPSCADLFVYYKKCM
VQCSQLSTGEPMIALTTIFQKFLREYAWKILSGNLPKSSTNSGGLTISSLLKEKEVSEAA
KFTVDELCLICSILSTAEYCLATTQQLEEKLKEKVDKVLVERINLTGEMDTFSTVISNSI
QLLVQDLDAACDPALTAMSKMPWQSVEHVGDQSPYVTSIIMHIKQNVPIIRDNLASTRKY
FTQFCIKFTNSFIPKFINHLFRCKPISMVGAEQLLLDTHSLKTVLLDLPSIGSQVLRKAP
ASYTKIVVKGMTRAEMILKVVMAPHEPPVVFVDNYIKLLADGNPETFQKILDMKGLKRSE
QSSMLELFRQRLPTPPSGADGGPSLSFSTPTPEQESSRIRKLEKLIKKRL
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggaagaagaatttgaatttgctgaagatctagaggctattttgcatctaacc
ccagaggtgcagctagccattgaacaggtattccccagccaagacccgctggatagagcc
gacttcaatgcggtggaatacatcaacacacttttccccaccgagcagtccttggctaat
atcgacgatgtggtaaacaaaattcgattgaagatacggcgtctggatgacaacatcagg
acagttgtgaggggccaaaccaatgtaggccaagatggcagacaggctttggaggaggcc
cagatagctatccagcagctctttggaaaaatcaaagacatcaaggacaaagctgagaag
tctgaacaaatggtcaaggagataacgagggacataaagcagttggaccatgccaagcgc
cacctcactacttccatcaccaccctgaaccacctgcacatgctggtggggggtgtcgac
tctttagaagccatgaccaggaagaggcagtatggggaggtggccaacttgctgcaggga
gtggtcaacgtgctcgaacatttccacaagtatatgggcataccccagatcagacagctt
tcagagagagtaaaggcggcacagagtgagctggggactcagatcttggcagattttgaa
gaagccttcccctcacagggctcgaagagaccaggtgggcccagtaacgtgctgagggat
gcctgtctggtggcaaatgtactcgacccacgcatcaagcaagagatcatcaagaagttt
attaggcagcacctctcagagtatctggtcctcttccaggaaaatcaagacgttgcttgg
ctcgacaagatcgatcgccgctatgcctggatcaagcgccagctgctggactatgaagaa
aaatatggacgcatgtttcctgaagagtggtgcatgacggagcgtatcgctgtggagttc
tgccacatcaccagggctgagctagccaaagtgatgcgaacacgggctaaggagattgag
gtgaaactgcttctgtttgccattcagaggaccacaaactttgagggcttgctggccaaa
cgcttcacgggatgcactttgacggacgtacctggaaagaggccagacagcccactagac
ccaactaacccctttctggaggatgagccaggagaggaggccggcacagaaaaggatgaa
gatctgactaagccaaagaagcccaaagctccagacaaccctttccatggcattgtctcc
aaatgctttgaacctcatctatacgtctacatagagtcccaagacaagaatctgggtgag
ctgattgaccggtttgtggctgatttccgggcacaaggccctcccaaggctggcacggag
gagggtggagcagtactgcccagctgtgctgacctgtttgtctattacaaaaagtgtatg
gtgcagtgctcccaactaagcactggagaaccgatgatagccctcacaaccatcttccag
aaattcctcagagagtatgcctggaagatcctctctggcaacctgcctaaatccagcact
aacagcgggggtcttaccatcagcagcctgttgaaagaaaaagaagtctctgaagcagca
aagttcactgtagacgagctctgcctgatctgtagcattctgagcactgcggagtactgt
ctggctacaacacagcagttggaagagaagctgaaggagaaggtagataaagtcttggta
gagagaatcaatttgacgggggagatggacacattcagcactgtgatctcaaatagtatc
cagctgcttgttcaggatcttgatgctgcttgtgatcctgcactaactgctatgagcaag
atgccgtggcagagtgtggagcatgttggtgaccagagtccttatgtgacatccattata
atgcacattaaacaaaatgtgccaatcatcagagacaatctcgcctccacacgcaaatat
ttcacgcaattctgcatcaagttcacaaattctttcattcccaaattcatcaaccacttg
tttagatgtaagcctatcagcatggtgggagctgaacaacttctcctcgacactcactcc
ttgaagacggtcctgttggatctgccctccataggctcccaggtgctccgcaaggcacct
gccagctacaccaagatagtggttaaaggcatgactcgtgcagagatgatacttaaggtt
gtgatggccccacatgaacctccggtggtgtttgttgataactacatcaagctcctggct
gatggcaatcccgagaccttccagaagattctggatatgaagggcctgaagcgcagcgag
cagagcagcatgctggagctcttcaggcaaaggctacccactccgccctcgggggcagac
ggtgggccctctctgtccttcagtacccccacccctgagcaggaatcctcacgtatccgc
aaactagagaagctcattaagaagaggctgtga
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