Maylandia zebra (zebra mbuna): 101486251
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Entry
101486251 CDS
T02814
Symbol
thsd4
Name
(RefSeq) thrombospondin type-1 domain-containing protein 4 isoform X1
KO
K23377
thrombospondin type-1 domain-containing protein 4
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
101486251 (thsd4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
mze04990
]
101486251 (thsd4)
Domain-containing proteins not elsewhere classified [BR:
mze04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
101486251 (thsd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
TSP_1
ADAMTS_spacer1
ADAMTS_CR_3
TSP1_spondin
TSP1_CCN
PLAC
Motif
Other DBs
NCBI-GeneID:
101486251
NCBI-ProteinID:
XP_004539776
UniProt:
A0A3P9BCI1
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All DBs
Position
LG1:7727599..7775726
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AA seq
971 aa
AA seq
DB search
MKGGCVWTVRLSMLLLLLWSDPLGSQHTTDHRKVPQRAEHHEEVRAEHGEIQGSWGVWGP
WSACSRTCGKGVQEQTRPCLPVYAPSQYPSRGAGVQLHQPGHIVSALRPTVPLHRSTVRP
YNSSSRGELRKEKENRPGGRRRVTNIIPGKYGYGRAPYVTSLQTDTGQGSKIPRPHRHRR
SAAANSHHPTARGHGSHRLNNPNASSNLHLYSRPDINARTQHPRNNQVWAPLYQPSSANK
AEVQQEHHTGSHMSNPKQHQVRPYNPLSSSFCAGEHARYRICNSNACPPSSRHIRAVQCS
SYNNQPFMGRLYEWEPFNEVPIEQQCELNCRAIGFRFYVRQSERVIDGTPCGQNETSLCV
AGKCTSLGCDEYLGSGRVVDKCGVCGGDNSTCRLVSGVFKHSLSKIGYHKIVEIPEGATK
INVTEMVKSRNYLALRSRSGRSIINGNWAIDRPGKYEGAGTMFTYRRPNEISSTAGESFL
AEGPTNEILDVYMIFQQPNPGVHYEYILPSEKLVSPQQPSRRPEGNAVNGQDGYDQQNHQ
ENFNPAGSGRYSPPPTENQVPSVQPPRREREYNWKLTGATECSASCGKGFRYSIFHCVNR
LTQVQVSDSLCDSSSRPSPQEEACNLQPCPAFWDIGEWSECSKTCGLGMQHRQVLCRQVY
ANRTLNVHTSRCRHLERPETASTCQLKICSEWQIRSEWTSCSVPCGLGQRSREVHCVSNV
GDFVPDEECNMNLRPNDVENCDMGACAKSWFYTEWGNRCSAECGMGVRTRGVLCLTNQIS
SLPLEGCGSERPADSQVCNNGPCENRIEWFTGPWSQCSAECGTGTQQRSVVCLMKSNEGF
TVMPPYECSSLDKPLRQQSCSLKACGAKWYHTDWSACSKTCEGGFRVREVRCLSDDMLSR
EGCDVQLKPEEKEDCNPEPCIPLIDENCRDKYFNCNVVVQARLCVYDYYKTTCCASCSRV
AHKQSTYRRQS
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggaggctgtgtctggactgtcagactgtctatgctgctattgttactttggtca
gatcccctgggcagccagcacacaacagaccacagaaaggttcctcagagggcagagcac
cacgaggaagttagggcagagcatggagaaattcagggatcttggggtgtctggggtccc
tggtcagcttgctcccggacctgtggaaaaggagtacaagaacagactaggccgtgccta
cccgtgtacgctccatctcagtacccctccagaggggctggtgttcagcttcatcaacca
ggccatatagtttcagctcttcggcctacagttcctctgcaccgcagcacagtcagaccc
tacaacagcagcagccgtggagagctgagaaaagagaaggagaacaggcctggtgggcgc
aggagggtaacaaacattatcccagggaagtatggctatggaagggcgccctatgttact
tcactgcagacggatacaggccagggctctaagatccctcgcccacacagacacagacgc
tctgctgcagctaattcccaccaccccacagctagaggccatggtagccacaggttaaac
aaccctaatgcttccagcaatctccatctctacagcagacccgacattaatgccaggaca
cagcatcccagaaataaccaagtctgggctcccctttaccagcctagttcagccaacaag
gctgaggtccaacaggagcaccatacaggcagccacatgtccaatcctaagcagcatcaa
gtgagaccttacaaccctctgtcttcttccttctgtgctggggagcatgctcgctacagg
atctgcaacagtaatgcctgtcccccatccagcaggcacatccgggctgtccagtgttca
tcttacaacaaccagcctttcatgggcagactgtacgagtgggaaccttttaatgaggtt
cctattgagcagcagtgtgaactcaactgccgggccatagggttcaggttctacgtgcga
caatcagaaagggtgatcgacgggacgccatgtggacagaatgaaacttctctctgtgtg
gcaggaaagtgtacgagtctaggatgcgatgagtatctcggatcaggaagggtggtggac
aagtgtggcgtgtgtggaggtgacaactcaacctgtaggctggtttcaggagtgttcaaa
catagtttatccaagatcggctatcacaagatagtggagatcccagaaggagccaccaag
atcaatgttactgagatggtgaagagcagaaactacctagctttgcgaagccgatcaggg
cgatcaatcattaatggaaactgggcaattgaccggccaggaaagtatgagggtgcaggg
accatgttcacctaccgccgacccaatgaaatcagtagcacagctggggaatcctttctc
gctgaaggccccacaaatgagattctggacgtttatatgatcttccagcagccaaatcct
ggtgttcactatgagtacattctcccatctgagaagctcgtgagccctcagcaaccaagc
cgcaggccggaagggaatgctgtgaatggacaggatggatacgaccagcagaatcatcag
gaaaactttaatccagctggcagtggaagatattcgcctcctcccactgaaaaccaggta
ccctccgtacagccacccagacgtgagagagaatacaactggaaactgactggtgctaca
gagtgcagtgcttcctgtggtaaaggtttcagatattccatctttcactgtgtcaaccgg
ctgactcaggtccaggtatcggactctttgtgtgacagcagcagccgaccaagtccacag
gaagaggcctgcaacttgcagccctgcccagcattctgggatattggagaatggtcagag
tgcagcaaaacctgcggtctgggcatgcagcatcggcaggtcttgtgtcgccaggtttac
gccaaccgcaccctcaatgtccacacgagccgctgtcgacacctggagcggcctgaaact
gccagtacctgccagctaaagatctgcagtgagtggcagattcgctcagagtggacttct
tgctctgtgccatgtgggctgggtcagaggtcacgagaggtacactgtgtcagcaatgtg
ggcgactttgttcctgatgaggagtgcaacatgaatctgcggcccaatgatgtggagaac
tgtgatatgggagcttgtgccaagagctggttctacactgagtggggcaacaggtgctca
gctgaatgtggtatgggtgtacggacacggggagttctctgcctgaccaaccaaatcagc
agtctccctctggaaggatgtggcagcgaacggcccgcagactctcaggtctgcaacaac
ggtccgtgtgagaatcgaattgagtggttcacaggaccctggagccagtgctctgcagag
tgtggcaccggcacccagcagaggtcagtggtgtgtttgatgaagtcaaatgaaggattc
actgtcatgccaccatatgagtgctcatccctggacaaacctctcaggcagcagagctgt
agcctcaaggcctgtggagcaaagtggtaccacactgactggagtgcttgctccaaaaca
tgtgaaggaggtttccgtgtgagagaggtgcgctgtctgtctgatgacatgctgtccaga
gagggctgcgatgtgcagttgaaaccagaagagaaggaggactgcaacccagagccctgc
atacctctgatagatgagaactgcagagacaaatacttcaactgcaatgtggtggtccag
gctcgcctctgcgtgtatgattactacaagacaacatgctgtgcttcatgttcccgggtg
gcccacaaacagtcgacctatcgccgacaaagctag
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