Maylandia zebra (zebra mbuna): 101486319
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Entry
101486319 CDS
T02814
Symbol
sf1
Name
(RefSeq) splicing factor 1 isoform X1
KO
K13095
splicing factor 1
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101486319 (sf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mze03041
]
101486319 (sf1)
Spliceosome [BR:
mze03041
]
Complex A
Other components
Complex A specific factors
101486319 (sf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
KH_12
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
101486319
NCBI-ProteinID:
XP_004576135
UniProt:
A0A3P9BQM7
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All DBs
Position
LG3:complement(34338326..34351054)
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AA seq
680 aa
AA seq
DB search
MATGANATPLGKLHPSIGAKRAFDAGPGAGNGLMPTPGPPGSFPSLQGFQPSMPSASFPQ
SHQFNPGTSFSSQAQQQSAAGSGMAKPDFGQKKSRKKSRWSSETPDQKTVIPGMPTVIPP
GLTRDQERAYIVQLQIEDLTRKLRTGDLGIPVNPEDRSPSPEPIYNSEGKRLNTREYRTR
KKLEEERHALITEMVGLNPDFKPPADYKPPATRVNDKVMIPQDEYPEINFVGLLIGPRGN
TLKNIEKECCAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQI
RNILKQGIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQNSEPRSITNTTLCTKC
GGAGHISSDCKYSSSFAAHRATGGEPPQSAQDKARMDKEYLSLMAELGEAPVPTSAGGHT
STQGAPRAAGPNSTQPPPNRPPWMSSGPAENRNFHGMPGGPGGPGGPGGPHSFPPPMPSM
GGPPMPPNPNGLPPPWMQPPPPPMGQGPGPHGHPMGLLPPPMGMMPPPPPPPSSQPPPPP
SGPLPPWQQQAPPPPPTSSMATSTPLPWQQNTTTTSSPATGTLPPWQQPQQPAASGAQPP
PPMGTPSMVPPPPGVQPPLPPGAPPPPPPPPPGSTGVMYAPPPPPPPMDPSNFVTMMGMG
VPGMPPFGMPPAPPPPPPQN
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgggagcaaatgcaactccattagggaagttgcaccctagtattggcgctaaa
cgagcctttgatgccgggcctggtgcggggaacgggctgatgccaacaccggggccgccc
gggtcctttccttctctacaaggcttccagccttcgatgccaagcgcatcttttccccag
tctcatcagttcaacccggggacaagtttttcgagtcaagctcaacagcaatctgctgcg
gggagcggaatggctaaacctgatttcggccagaagaagtcaagaaagaagagtcgttgg
agcagcgagacgcctgatcagaagaccgtaatacctggcatgcccaccgttatcccaccc
ggactgacccgggatcaggagagagcatatatagtccaactgcagattgaagacctgact
cgtaaactgcgtacaggagacctgggaatccctgttaaccctgaggacaggtctccttct
cctgagcccatctacaacagcgagggcaagaggttaaacacccgcgagtatcgcacacga
aagaagctcgaggaggagcgacatgcacttatcactgaaatggttggactcaaccctgac
ttcaagcctcctgcagactacaagcctccagccaccagagtcaacgacaaagttatgatc
cctcaagatgaataccctgaaatcaactttgttggtctgctcattggaccccgtggtaat
acattgaagaacattgagaaggagtgctgtgccaagattatgatccgggggaaagggtct
gtgaaggaggggaaggttggtcgaaaagatggccagatgctgccaggggaggacgagcct
ctgcatgccctggtcactgccaacacgatggagaacgtcaagaaagctgtggagcagatt
cgtaacattttgaaacaaggcattgagacgcctgaggatcagaacgacctaagaaaaatg
cagctcagggagctggccagactcaatggcacactgagggaagacgacaacaggattctt
cgtccttggcagaactctgagccacgcagcattactaacaccaccctctgcactaaatgt
ggtggagccggccatatctcctcagactgcaagtacagcagctcgttcgctgcacacaga
gcaactggtggagagccccctcagtcagctcaagacaaggctcgtatggacaaggagtat
ctgtctctcatggctgagctgggggaggcccctgtcccaacgtcagccggaggacacacc
agcacccagggcgcacctcgggctgcaggccccaacagcacccaacctccaccgaaccgg
cctccgtggatgagttctggtccagccgagaacaggaactttcacggcatgcctgggggg
cccggggggcccggtggtcctggaggacctcacagttttcctcctccgatgcccagcatg
ggaggaccgcctatgcctcccaaccccaatggcttgcctccaccctggatgcagccccct
cctcctcccatgggccagggacctggaccgcatggacacccgatgggtctgctgccacct
ccaatgggtatgatgccacctccacctcctcccccaagcagccagccacctcctccccct
tcaggacctctgccaccttggcaacagcaggctccacctccccctccaaccagcagcatg
gcaactagcacaccactgccctggcaacagaacaccaccaccacatctagccccgccacc
ggcactctgcctccatggcaacagccccaacagcctgcagcctctggagcccagccccca
ccacccatgggtactccgtccatggtgcctcctccacctggggtccagcccccactgccc
ccgggcgctccaccaccaccacctccacctcctccaggctccacgggcgtgatgtatgcc
ccaccaccacctccaccacccatggacccctctaactttgtcacaatgatggggatgggg
gtaccgggcatgcccccttttggcatgcctcctgccccccctccccctcccccccagaat
taa
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