Maylandia zebra (zebra mbuna): 101486344
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Entry
101486344 CDS
T02814
Symbol
pnn
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze03013
Nucleocytoplasmic transport
mze03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101486344 (pnn)
03015 mRNA surveillance pathway
101486344 (pnn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mze03019
]
101486344 (pnn)
03041 Spliceosome [BR:
mze03041
]
101486344 (pnn)
Messenger RNA biogenesis [BR:
mze03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
101486344 (pnn)
Spliceosome [BR:
mze03041
]
Complex C
Other components
EJC/TREX
101486344 (pnn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
101486344
NCBI-ProteinID:
XP_004559376
UniProt:
A0A3P9BKI3
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Position
LG19:10612750..10617699
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AA seq
654 aa
AA seq
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MAVAVRSLQDQLEKAKESLKHVDDNIRKLTGRDPNESRPGQIRRLGGPMAGPGGGGRGRG
INLLRRSLSDMGSGGPPAKQRDIEGALLRLAGDQRARRDMRHDSDAEDDDDVKKPALQSS
VVATSKERTRRDLIQDQTMDERGKQRNRRMFGLLMGTLQKFKQESNVSSEKQKRRSEIEQ
KLEVQAEAERKKVENEKRELFEERRAKQTELRLLEQKVELAQLQEEWTSHNNRLVKYIRT
KTKPHIFYLPGKMCSATQKLLDESTKKLNAVFEERCEAFAEHLSKMESRPRRQLNREQDG
NTAATGTEQPEEGKPAGQVVKVTGNKGNVEMEEEEEDEEEEKEREKERDRKVTEKEEGEK
EVSKKVEEEQEGMELSEEKREGEDQKKGDKEGSPESEEMEVEQAVEEEDRGKDVGVEMER
KQGPTDLQDSKSSEPAVSSQEAENTSHQPEPSHAAEEPAAESPVSNGASKTPEPPSAPSV
PAQVSTVPGSTVQDSTVDRQAVEGKSQEEPPQKLPASQEVPVTAPAKEDSGRGRKKEKES
RKGRSRSNSSSSSSSGSSSSGSSSSSSGSSRSSSSSSSSSSSSSSSRSRDSGKRKRRPSD
RDRKKGDERRSHKRGGSGGGGRDSRGSKRSEEGRGRSSRSDREHKDRDRKDKRR
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggcagtgcggagcttgcaagaccagctagaaaaagccaaggaaagtttgaag
catgtggacgataatattcgtaaactgaccggacgtgatcctaatgaatcaaggccgggt
cagatccgtcggcttggaggccccatggcaggccctggaggaggtggtagaggcagagga
ataaacctgctaagacgcagtctctcagacatgggaagcggcggccctcctgccaagcaa
agggacatcgaaggagccctgctaaggctggcaggggaccagagggccaggagggacatg
cgtcacgacagcgacgccgaggatgacgatgatgtcaaaaagccggcgttgcagtcgtct
gtagtagctacctccaaagagagaacgcgccgagatctcattcaggaccaaaccatggat
gagaggggaaaacagaggaatcggcgcatgttcggcctgctcatggggaccctgcagaaa
ttcaagcaggagtcaaatgtctcttcagaaaagcaaaagcggcgttctgagattgagcag
aagctcgaggttcaggctgaggctgagagaaagaaggtggagaatgaaaagagggagctg
tttgaggagaggagagccaagcagacagagttgagacttctggagcagaaagtggaattg
gctcaattgcaagaggagtggaccagccacaataatcgcctggtgaaatacattcgcaca
aagaccaagcctcatatcttctacctgcctggaaaaatgtgctccgcaacacagaaactc
ctcgatgaatccaccaagaaactaaatgctgtgtttgaagagaggtgtgaggcttttgct
gaacacctcagcaagatggagtcgcgtccccgtcgacaactaaaccgcgaacaggacggc
aacactgcggcaacagggacggagcagccggaggagggtaagccagcaggtcaggtagtc
aaagtgacaggtaataagggcaatgtagagatggaagaagaggaggaagatgaggaggag
gaaaaggaaagggaaaaggagagggatagaaaggtgacagagaaggaggaaggggagaag
gaagtgtctaagaaggtagaggaagagcaggaagggatggagttaagtgaggagaagcgg
gaaggagaggatcagaagaagggagacaaagagggtagtccagagtcagaggagatggag
gtagagcaggcagtagaggaggaggacaggggtaaggatgtaggggtggagatggaacgc
aagcaggggcccacagatctccaggacagcaagtcctctgaaccagctgtaagcagccag
gaagccgaaaacaccagccatcagcccgagcccagccacgctgctgaggaaccagcagca
gagtctcctgtgagcaatggggcatctaaaaccccagaacccccgtcagcccctagtgtg
cctgcacaagtgtccacagtccctggctctacggtccaggactccacagttgacagacag
gcagtggaggggaaatcgcaggaggaacccccacaaaaactacctgcttcccaggaggtc
cctgttactgccccagctaaggaggacagcggcagagggagaaagaaggaaaaggaatcg
aggaaaggccgcagtcgcagtaacagctcttcctcttcgtcctctggctcctcctccagc
ggaagttcctcttcctcctccgggtccagccgctcctcatcatcctcttcttcctcctca
tcctcatcatccagcagccgcagccgagacagcggcaaacgcaagaggaggccctcagat
agagacaggaagaagggagacgagaggcgaagccacaagagaggagggagtggcggagga
gggagggactcgaggggatcgaagaggagcgaggaaggaaggggcaggtcgtcccggagc
gatagggagcataaagatagagacaggaaggacaagcgacgctaa
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