Maylandia zebra (zebra mbuna): 101486802
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Entry
101486802 CDS
T02814
Symbol
xrcc5
Name
(RefSeq) X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
101486802 (xrcc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mze03400
]
101486802 (xrcc5)
DNA repair and recombination proteins [BR:
mze03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
101486802 (xrcc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_PK_bind
Ku_C
DUF6005
DUF4599
Motif
Other DBs
NCBI-GeneID:
101486802
NCBI-ProteinID:
XP_004555511
UniProt:
A0A3P9BJC7
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Position
LG16:19207733..19221397
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AA seq
723 aa
AA seq
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MAGSKTAVVLCMDVGLTMSNSAPGEESSFELAKKVIQKFVQRQVFSETKIELALVLFGTD
STDNPLSQDGQYQNIRVHRHLMIPDCELLIEIENQVQPESQQGDWLDALVVCMDLLHTET
KGKKYDCLNIALLTDLNTQTNEESLEVIIKNLTQSGITVQFFLPFPVEEDKEGQGDSERR
DPGHPGTGKGLSREQKKNKELVKEMMLSLDVEDGLDEIHTFRNAIEELCMFKRVERRPVA
WPCQLTIGSSLSIRIVGYKAVTDEKLKKMWITVDAQSHQKDDVKRETVYCLDDDNETEVQ
KDDIIQGFRYGSDIVPFSKVDQEQMKYKHDGKCFAVLGFTKQSTIRRNQFMGSQIIKIFA
ARDDEHAGVALSALIRALNELQMVAIVRYAFNRISNPQVGAAFPCIKQDSECLMYIQLPF
MEDLRQFTFPSLENKKFTPSDAQLSAVDSLIDSMMLVEEDENGEQRDLFKPHRIPNPAFQ
RHFQCLHHRAVSPGTPLPPIEPWLKAALDRPEVITERCQDPLDVLKRKFPLTEVEKKKKL
KTSAQIFGKESEESEAKKVKEDEAEEYNLADIAEGSVTSVGSVDPARDFRALIKQKILPF
GEVCQQLTHRIEQLLSNKNTQYYMKSITCIQAFREQSVKLGNAEHYNSYLQSLKGSIPNR
GLEVFWELLVQDGLTLISKDEVEGSSVSKAEANQFLVAEEKKEEAAPAPVEDTGDVDDLL
DMM
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggcaggctcaaaaacagctgtggtgctgtgcatggatgtggggcttaccatgtccaac
tctgcacccggggaagagtcttcctttgaacttgccaaaaaagtcatccagaagtttgtc
cagcgccaggttttttcagagacgaagattgagctggctttggtcctgtttggcacagac
tccacagacaaccctctgagccaggatggccagtaccagaacatcagagtacatcgacac
cttatgatccctgattgtgaactactgatagagattgaaaatcaggtccaaccagagagt
cagcagggtgactggctggatgcccttgtagtttgcatggatcttcttcatactgaaaca
aaggggaaaaagtatgattgtctcaacattgccctgctgactgacctcaacacccagacc
aacgaagaaagcctggaggttatcatcaagaacctcactcagtctggcatcaccgtgcag
ttctttttgcctttccctgtggaagaggataaggagggtcaaggggattcagagagaaga
gatcccggtcacccggggacaggcaaaggtctgtccagggagcagaagaaaaacaaggaa
ttggtgaaagagatgatgctgagcctggatgtggaggacggcctggatgaaattcacacc
ttcaggaatgcgatcgaggagctgtgcatgttcaagcgggtggagaggcgacccgtggcc
tggccctgtcagctgaccataggcagctctctctccatccgaatcgttggctacaaagca
gtgaccgatgagaagctgaagaaaatgtggattacagttgatgctcaatctcaccagaaa
gatgatgtgaagagagaaacggtttactgcctggacgatgacaatgagacagaggtgcaa
aaggacgacatcatccaaggttttcgttatggaagtgacattgttcccttctccaaggtc
gatcaagaacagatgaagtacaagcacgatgggaagtgcttcgctgtgctgggattcacc
aaacagagcacgatacgtcgtaatcagtttatgggttctcaaatcatcaaaatctttgct
gcgagggatgatgagcacgcaggagtggctctgtcggctcttatccgcgcgctgaatgaa
ctccagatggtggctattgtacgttacgcttttaaccgcatcagcaaccctcaggtgggc
gcagcgttcccctgtatcaagcaggactctgagtgcctgatgtacatccagctgccgttc
atggaagacctcaggcagttcacgtttccttctcttgaaaacaaaaagtttactccatca
gatgctcagctgtctgctgtggactctttgattgactccatgatgttggtagaagaagat
gagaacggagaacaaagagacttgttcaagccccatcgcattcccaaccctgccttccag
aggcacttccagtgtctgcaccatcgggcagtaagtcccggtacccctcttcctccgata
gagccatggctgaaagctgctcttgatcgtcctgaggttattacagaacgctgccaggat
ccacttgacgtgctgaagaggaaatttcctctcactgaagtggagaagaaaaagaagctt
aaaactagtgctcagatttttggcaaagagtcagaggagtccgaggcaaagaaagtaaaa
gaagatgaagcagaggagtataacttggccgacattgctgaaggctctgttacctcggtg
ggaagtgttgacccagctcgagacttccgcgctttgatcaaacagaaaattcttccgttc
ggagaagtctgccagcagctgactcacaggatagagcagttgctaagcaacaagaacaca
cagtactacatgaaaagcatcacctgtatccaggctttcagagagcaatccgttaagctg
ggaaatgctgaacactacaatagctaccttcagtccctgaaaggaagcatcccaaacaga
ggactagaggtgttctgggaactgctcgttcaagatggtttaacgctgatcagcaaggat
gaggtggaaggaagctcggtctccaaagccgaagctaatcagtttctggttgctgaggag
aagaaagaggaggcagctcctgcaccagttgaagatactggagatgttgatgacttgctg
gatatgatgtaa
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