Maylandia zebra (zebra mbuna): 101486977
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Entry
101486977 CDS
T02814
Name
(RefSeq) protocadherin-18 isoform X1
KO
K16499
protocadherin delta 2
Organism
mze
Maylandia zebra (zebra mbuna)
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mze04515
]
101486977
Cell adhesion molecules [BR:
mze04515
]
Cadherins
Protocadherins
101486977
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
PAG
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
101486977
NCBI-ProteinID:
XP_004574146
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Position
LG2:complement(1637982..1647359)
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AA seq
1230 aa
AA seq
DB search
MGAKRRQRKATVWSSAPLQLALLLALVHGASGKTLKYKVYEEQKVGTVIARLKEDVSAVL
PKLPSSLSFRFRVMQLGGTPLLAVREDDGQISIGTRIDREKLCEKNSNCSIEFDVVTLPT
EYLQLFHVEVEVLDINDNSPHFARAIVPIEISESASVGTRIPLDGAVDADVGENSLHTYS
LTANNFFKIDVRTRTDGAKYAELVVMRELDREVQASYQLQLTASDNGVPPKSGSTLLKIS
ISDSNDNSPAFDEQAYAINLLENSPLGTLIIDLNATDPDEGTNGKIVYSFSSHVSPKILE
TFKIHPENGHITLIKKVDYETGASYELDVQAQDLGPNSIPGLCKIVVKVVDVNDNKPEIN
INLMTPGKEEVAYISEGAPVDTFIALVRVDDIDGGLNGEVVCRLHGHGHFRLQKTHEKNY
MILTNVSLDREKRSEYSLTVIAEDRGSPSLSTIKHFTVQVLDENDNPPCFEKSRYEVFKS
ENNSPGAYLMTVVASDPDLGTNGQVTYTIIDTVVQDSPISTYVTIDPSNGAIYALRSFDH
EDVSRIAFTVQARDGGNPVQSANASIHLTVLDENDNPPIIHSPSLRNHTAELPVWKYASP
GQLITALKVTDRDAGANGEVSCTIIGGNEDGLFVMDARRCELRTNASLEQAPRDIMEIRV
EVQDRGISPLSTGALLRLSVQENMDILPSLYPTGSTQASLDLSLIVIISLGAVCALLLIV
MLMFATARCSREKKDPRHNYNCRVAENSYQNHPKKPARQIHKADITLVPTVNGTLPVRAH
PRSPSPSPTPERGTLGSRQSHHSRQSLNSLVTISSNHVQENFALELAHATPPVEQVSQLL
SMLHQGQYQPRPSFRGNKYTRSYRYALNEMDKFSLKDSGRGDSEAGDSDYEPGRESPMDR
LLGEGFTEIYAPDGQHRAHAAMRLCTDECRVLGHSDQCWMPPLASPASSDYRSNLYIPGE
EARQASDVSQEKTPQPCTDTGSARNQSFSTFGKDLVGEDGEDEGGEGAGSNEAADEDLCG
TTSLLSEMSSVFQRLIPQGLDSYVQVSENQKGTSLSGMGVPMTGSLDRRRGHLPGKPSPS
VHQQGVAAWAANTHFQNPGSSIGPSGHHQGGSYHTLKPSTKLSSQSSSHKGSQAPKNSPQ
NKPHSSPLLTALVSPTLVQPPPVPVSAPLPGPSSKWLPAMEEIPENYEEDDFDSVLGHLQ
GKRSDSRHELVDASDLVAEINKLLQDVRQS
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atgggggcaaaaaggaggcaaagaaaagcgaccgtttggtcctcggctccactccagctc
gcgctgctgctcgcgctcgtgcacggcgccagcgggaagactctgaaatacaaagtttac
gaggagcagaaagtgggcacagtcatcgcgcggctgaaggaggacgtgtccgcggttctg
ccaaagttacccagctccctgagctttcgcttccgcgtgatgcagctgggcggcacgccg
ctgctggccgtgcgcgaggacgacggacagatcagcatcggcaccaggatcgaccgcgag
aagctctgcgagaaaaactccaactgctccattgaattcgacgtggtcacgctgcccacg
gagtacctgcagctgttccacgtagaagtggaagtcctggacatcaacgacaactctccg
cactttgctcgcgccatcgtccccattgagatctccgagagcgcgtcagtggggacgcgc
atcccgctggacggcgctgtggatgcggacgtaggggagaactctctgcacacgtactca
ctcacagccaacaacttttttaaaatcgacgtgaggacccggacagacggggccaagtac
gcagagctggtggtgatgagagaactggaccgggaggtgcaggccagttaccagttgcag
ctaacggcctcggataacggggtgccccccaagtctggctccactctgctcaagatcagt
atttcggattccaacgacaacagcccggcctttgacgaacaggcttatgcaatcaatctg
ctagaaaactctccccttgggactctgattattgatttaaacgccacggatcctgacgag
ggcactaatgggaaaatagtttactctttcagcagtcatgtctcaccaaagatcctggag
acctttaagatccaccctgaaaacggccacattactctgattaaaaaggtggactatgaa
accggtgcttcctacgagctggatgttcaggctcaggacttgggccctaattccattcct
ggactttgcaaaatcgtggtcaaagttgtggatgtcaacgacaataaaccagagataaac
attaacctgatgacacctggcaaagaggaggtggcctacatttcagagggggcccctgtg
gacacgttcatagctctggtgcgtgttgatgacattgatggagggctcaacggggaggtg
gtgtgcaggctgcacggccatggccacttcaggctccagaagacccacgagaagaactat
atgattctcactaatgtctcactggaccgtgagaagaggtcagagtacagtttgacggtc
atagctgaggacaggggctcccccagcctttccaccatcaaacactttaccgtccaggtt
ctggatgaaaatgacaatcctccgtgttttgagaagagccgctacgaggtctttaagtca
gagaacaactctcctggagcctacctgatgacagtggtggcctcagatccagatctgggc
accaacggtcaggtcacttacaccatcatagacacggtggtacaagacagccccatttcc
acctacgtcaccatcgacccctctaatggtgccatctatgcactgcgcagctttgaccat
gaggatgtcagccggatcgccttcactgttcaggcacgtgatgggggaaaccccgtgcag
tcggccaatgcctccatccatctgactgttttggatgaaaatgacaacccgcccatcatt
cactccccctcactccggaatcataccgctgagcttcccgtgtggaagtatgcatccccg
ggtcagctgatcaccgcccttaaagtcacagaccgtgatgctggtgccaacggagaggtg
agctgcaccatcatcggtggcaatgaggatgggctgtttgtgatggatgcccggcgctgt
gagctcagaaccaatgccagtctggagcaggctccgcgggacataatggagatcagggtg
gaagtgcaggacagaggcatcagcccgctgtccacaggagccctcctcaggctctctgtg
caggagaacatggacattctcccctctctgtatcctaccggctccacccaggcctcactg
gatctctccctcattgtcatcatttctctgggtgcagtctgtgctctgctgctcatcgtg
atgctgatgtttgcgacggcccgctgcagccgtgagaagaaagaccccagacacaactac
aactgtcgcgtggcggagaacagctaccagaaccaccctaagaagcccgccaggcaaatc
cacaaggcagacatcaccctggtcccgaccgtcaatggaactttacctgtgcgtgcacac
ccgcgctccccctccccttcccctacacctgagagaggcacgctggggagcaggcagagc
catcatagccgccagtcactgaacagcctcgtcaccatctcctccaatcatgtgcaagag
aactttgctctggagctggcccacgccactcctcctgtagagcaagtctcacagcttctg
tccatgcttcatcagggccagtaccagccacggccaagcttcagaggcaacaaatacacc
agaagctacagatatgccctgaatgagatggataagttcagtctgaaggacagcggacgg
ggagacagtgaggccggggacagcgactacgagcccggcagggagtcccccatggacagg
ctcctcggtgagggctttactgagatatatgcccctgatggccagcacagagcacatgca
gccatgaggctttgcacagacgagtgccgcgttctgggtcactctgatcagtgttggatg
ccacccctggcctccccagcctcctctgactaccgcagcaatctctacatccccggggaa
gaagcccgccaagccagtgacgtgtctcaagaaaagaccccgcagccctgcactgatacc
ggctccgcccggaaccagagcttctccacctttggcaaggacctcgttggggaggacggt
gaagacgaagggggagaaggtgccggcagcaacgaggccgcagacgaagacctgtgtggg
accacgtctttgctttcagagatgagcagcgtgtttcagaggttaataccccagggcctg
gactcatatgtccaggtcagtgaaaaccagaaggggactagcctgagtgggatgggcgtg
ccgatgactggatctttagatcgcaggaggggtcatttgcccggcaagcccagcccctct
gtacaccaacagggagtggcagcctgggctgctaacactcacttccagaacccaggtagc
agcataggcccatctggccaccaccagggcggtagctaccacacgctgaaaccaagcacc
aagctcagctcacagagcagcagccacaagggctcacaggcgcccaaaaacagcccccag
aacaagccccacagcagccctctgcttacagcgctggtcagccccacgctggtgcagcct
cccccggtgccggtgtcggcgccgctccctgggccttcctccaagtggctgccagccatg
gaggagatcccagagaactacgaggaggacgattttgactcggtgctcggtcaccttcag
ggcaaacgtagcgatagccggcatgaattggtggacgccagtgatttggtggctgagatc
aacaaactgttacaggatgttcggcagagctag
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