KEGG   Maylandia zebra (zebra mbuna): 101487225
Entry
101487225         CDS       T02814                                 
Symbol
rfc2
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
mze  Maylandia zebra (zebra mbuna)
Pathway
mze03030  DNA replication
mze03410  Base excision repair
mze03420  Nucleotide excision repair
mze03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mze00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    101487225 (rfc2)
   03410 Base excision repair
    101487225 (rfc2)
   03420 Nucleotide excision repair
    101487225 (rfc2)
   03430 Mismatch repair
    101487225 (rfc2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mze03032]
    101487225 (rfc2)
   03036 Chromosome and associated proteins [BR:mze03036]
    101487225 (rfc2)
   03400 DNA repair and recombination proteins [BR:mze03400]
    101487225 (rfc2)
DNA replication proteins [BR:mze03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    101487225 (rfc2)
  DNA Replication Termination Factors
   ELG1-RFC complex
    101487225 (rfc2)
Chromosome and associated proteins [BR:mze03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    101487225 (rfc2)
DNA repair and recombination proteins [BR:mze03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     101487225 (rfc2)
  Check point factors
   HRAD17(Rad24)-RFC complex
    101487225 (rfc2)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RCF1-5-like_lid AAA_22 AAA_14 AAA_16 Viral_helicase1 Rad17 Mg_chelatase AAA_11 AAA_24 nSTAND3 RuvB_N AAA_assoc_2 AAA_18 AAA_19 DEAD MipZ AAA_5 ABC_tran DNAX_ATPase_lid AAA_30 AAA_28 RNA_helicase AAA_25 MeaB AAA_23 SLFN-g3_helicase NTPase_1 AAA_2 MCM PPR_1 FtsK_SpoIIIE bpMoxR DUF815
Other DBs
NCBI-GeneID: 101487225
NCBI-ProteinID: XP_004567591
UniProt: A0A3P9DPL6
LinkDB
Position
LG20:29652778..29660973
AA seq 356 aa
MDVEMETECKQKPTESGQKADTEAGESSSKGSGSAYELPWVEKYRPLKLNEIVGNEETVS
RLEVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGTSMKDAVLELNASNDRGIDVVRN
KIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRIMEIYSKTTRFALACNASDKII
EPIQSRCAVLRYSKLTDGQILVRLQEVVEKERLSVSDDGLEAIIFTAQGDMRQALNNLQS
THSGFGYINSENVFKVCDEPHPLMVKSMLGHCVDGNIDEAYKVVEQLWALGYSPVDIIGN
IFRVCKTYQMAEYLKLEFIKEIGYTHMRIAEGVNSLLQMAGLLARLCSKTAPAAAS
NT seq 1071 nt   +upstreamnt  +downstreamnt
atggatgtggagatggagactgagtgtaagcagaaacccacagaaagcggacaaaaggcg
gacacggaggccggagagtcctcgtctaaaggctccgggagcgcttacgagctaccgtgg
gtggagaaataccggccgctgaagctgaacgagattgtgggaaacgaggagacggtgagc
aggctggaggtcttcgccagagagggaaacgtccccaacataatcatcgcaggtcctccc
ggcactggaaagaccaccagcatcttgtgtttggcccgcgctctgctgggaacctcgatg
aaggacgccgtgctggagctgaacgcctccaacgacaggggcatcgacgtggtgaggaac
aagatcaagatgtttgctcagcagaaggtcacactgcccaaaggacggcacaagatcatc
attctggacgaagccgacagcatgacagacggagctcagcaggcactgaggaggatcatg
gagatctactcgaagacgacgcgcttcgctctcgcctgcaacgcctccgataagatcatc
gagccgatccagtcccgctgcgccgtgctgcgctactccaaactgaccgacggccagatc
ctcgtccggctgcaggaagtggtggagaaagagcgcctctcagtgtccgacgatggactg
gaagccatcatcttcactgcgcagggagacatgagacaggcgctgaacaacctgcagtcc
actcactccggctttggctacatcaacagcgagaacgtgtttaaggtgtgcgacgagccc
caccccctgatggtgaaaagcatgctgggacactgcgtggacgggaacatcgacgaggcc
tacaaagtcgtggagcagctgtgggcgctgggctactctccagtggacatcatcgggaac
atcttcagggtctgtaagacctaccagatggccgagtacctgaagctggagttcatcaag
gagatcggctacacccacatgcggatagctgaaggcgtgaactccctgctgcagatggct
ggtctgctcgcacggctctgcagcaagacggcgcccgccgctgccagctaa

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