Maylandia zebra (zebra mbuna): 101487315
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Entry
101487315 CDS
T02814
Symbol
pcdh17
Name
(RefSeq) protocadherin-17 isoform X1
KO
K16499
protocadherin delta 2
Organism
mze
Maylandia zebra (zebra mbuna)
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mze04515
]
101487315 (pcdh17)
Cell adhesion molecules [BR:
mze04515
]
Cadherins
Protocadherins
101487315 (pcdh17)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
PepSY
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
101487315
NCBI-ProteinID:
XP_004543413
UniProt:
A0A3P9B364
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Position
LG1:24084671..24153993
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AA seq
1141 aa
AA seq
DB search
MYLSIFFFLLLWAQALTLKNLNYSVPEEQGPGTVIGNIAKDARLGIEQTGQGGQGKKANF
RVLENSAPHLIDVDPQSGLLYTKQRIDRETLCKRNPKCQLSMEVFANDKEICMIKIDIQD
INDNSPMFPSDQIDIDISENAVPGTRFPLTSAHDPDAGENGLKTYQITRDDYNLFSLEVK
SRGDGTKFPELVIQRPLDREERSHHTLILSATDGGEYPRSGTMQINVKVIDSNDNSPVFD
QPSYVVEIPENSPPGKVLIDLNATDPDEGNNGQVVYSFSGYAPERIRELFSIDSRTGVIK
IQGEIDYEESPVIEIDVQAKDLGPNPIPGHCKVTVKVLDRNDNWPSIGFVSVRQGAISEA
APPGTVIALVRVTDKDSGRNGQLQCRVLGNVPFKLEENYDNFYTVVTDRPLDREMQDEYN
VTIVAKDNGIPPLNSTKSFTVKILDENDNTPRFTKSVYLLQIPENNIPGEYLGSVLAHDP
DLGQNGTVYYSIINSNVSGGDVNTYVNVNAANGAIYAVRSFNYEQIKYFDFKVLAKDAGS
PHLESNATVRISVLDVNDNIPVIVLPLLQNDTAEIHVPRNVGVGYIVTTVRAVDNDYGES
GRLTYEISDGNEEHLFEIDPVTGEVRTAHPFWDDVSPIVELIIRVSDHGKPTLTAAARLI
IKASNGRPPDGLPHMKDNQNWDMSLPLIVTLSIISIMLLAAMVTIAIKCKRENKEIRTYN
CRIAEYSHPQLGKGKKKKINKNDIMLVQSEVEERDAMNVMNVVSSPSLATSPMYFDYQTR
LPLSSPRSEVMYLKPTANNLSVPQGHVGCHTSFTGPVTSTTDTPTNRMSIIQTDNFPTEP
NYMGSRQQFVQSSSTFKDPERASLRDSGHGDSDQADSDQDTNKGSCCDMSAKEALKLKAA
GVKPPPLEQDEDCLNCTEECRVLGHSDRCWMPQFPTGGNQAEGIDYRNNMFVPAGMETVP
ETETYETVNPNGKKTFCTFGKERRDHTVLVANVKPYLKAKRALSPLLQEVPSASSSPTKG
CFTMSPCSSVKSPADGAEGKPPPATCSGHYGPPDGQYLSPTKQTREQGVYPSLPPSDPVA
KVLAEARSRISQEAAGEMECVLEQVEPDASRDGMDADQVVRDIDKLLQDCRGSEATGTLR
K
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgtatctttctattttctttttcctgctcttgtgggctcaagccctgacattgaaaaac
ttgaattactctgtcccagaggagcagggtccgggtacagtgattgggaacattgccaaa
gatgccagacttggaattgaacagactgggcagggaggacagggtaagaaagccaacttc
agagtgctggagaactcagccccgcatctcatcgacgtggacccacaaagcggattgctg
tatacgaaacagcgcatcgacagggaaacattgtgtaagagaaaccccaagtgccagctc
tcaatggaagtgtttgccaacgacaaggagatatgcatgatcaagatagatattcaggac
atcaatgacaactcacctatgtttccttcggatcagattgatattgacatttctgaaaat
gcagtcccagggacacgctttcccctgaccagcgcacatgacccagatgcaggggaaaac
ggcctgaaaacctatcaaataacacgcgatgactacaatctcttttctttggaggtaaaa
tcccgtggtgacgggactaaattcccagaattagttattcaacgaccactggaccgggaa
gaaagaagccatcacacccttatattgtcagccactgatgggggcgaatatcctaggtca
ggcaccatgcagataaatgttaaagttattgattccaatgataacagccctgtgtttgat
cagccctcgtatgttgtggaaattcctgaaaattcacctcctggaaaagtcttgattgat
ctaaatgccaccgatcctgatgaggggaacaatggacaagtagtctattcctttagtggc
tatgctccagagagaatccgagagcttttctccatagattcaagaacaggagtcataaag
attcagggtgaaattgactatgaagaaagcccagttattgagattgacgtccaggcaaag
gatctaggtcccaatccaatcccaggccattgtaaagtgaccgttaaagtgcttgacagg
aatgataactggccatctataggctttgtgtctgtgagacagggggccatcagtgaggca
gctcctccaggcactgtcattgctcttgtccgtgtcacagacaaggactcaggcaggaat
gggcagcttcaatgcagagtcctaggtaatgtaccttttaaactcgaagagaactatgac
aacttttacacagtggtgacagacaggcccttggatagggagatgcaggacgagtacaat
gtcaccattgtggccaaagacaacggcatacctcctctgaactccacaaaatccttcaca
gtaaagatcctggatgagaatgacaatacccctcgctttaccaagtcagtctaccttctt
cagattcctgagaacaatatacctggggaatacctggggtcagttctggcacatgaccca
gaccttgggcaaaatggcaccgtgtactacagcataattaactccaatgttagtgggggt
gatgtcaacacctatgttaatgtaaatgctgctaatggagccatctatgctgttcgatct
tttaactatgagcaaataaaatattttgacttcaaggttctggctaaggatgcaggatct
ccgcacttggagagcaatgctacagtgcgcatcagtgttctggatgtcaatgacaacatc
cctgtcatagttttgccgcttcttcagaatgataccgctgaaatccacgtgccacgtaat
gttggcgttggctacattgtcaccacagtgagggcggtagacaatgactacggtgaaagt
gggcggcttacctatgagatatcagatggcaatgaggaacatctctttgagattgatcca
gtgaccggcgaggtacgaacggctcacccattctgggacgacgtgagccccattgttgag
ctgatcattcgagtatcggaccacggcaagccgactctgaccgctgccgccaggctcatc
atcaaggcctccaatggacgacctcctgatggactgccgcacatgaaggacaatcagaac
tgggacatgtctttgcctcttattgtaactcttagcatcatatctatcatgcttttggct
gccatggtgaccatagctatcaagtgcaagcgggaaaacaaggagattcgcacttacaat
tgtcgcattgcagagtactcgcacccgcagctggggaaagggaagaagaagaagattaac
aagaacgacatcatgctggtgcagagcgaggtggaggagcgggatgccatgaatgtgatg
aatgtggtaagcagcccttccttggccacctctcccatgtactttgactaccagacacgt
ctgccactcagctcaccaaggtcagaggtcatgtacctcaaacccactgccaataacctc
agcgtgccccaaggccacgtgggatgccacaccagcttcacaggcccagtcaccagcacc
acagacacacctactaaccgcatgtccatcatacagacggacaatttccccacggagcct
aattatatgggtagcagacaacagtttgttcaaagtagttcaacattcaaagaccctgag
cgagcaagcctcagagacagcggtcatggtgacagcgaccaggctgacagtgaccaggac
accaacaaaggctcctgctgtgatatgtctgcaaaagaagccctcaagctgaaggctgca
ggcgtgaaaccaccacccctggagcaagatgaggattgtctgaactgtacagaggagtgc
cgggtactcggtcattctgaccgctgctggatgccccagttccccactggaggaaaccag
gcagagggtatcgactaccgcaacaatatgtttgtgccagcagggatggagactgtgcca
gagacagagacctacgagactgtcaaccccaatggcaagaaaacattctgtacttttggc
aaggagagacgtgaccacaccgtcctggttgccaacgtcaagccctacttgaaggcgaaa
cgtgctctcagcccactgctccaagaggtaccctcagcctccagcagtcctaccaagggc
tgcttcaccatgtctccttgctcctcagtcaaaagccccgccgacggggccgaaggcaaa
ccacctccggccacctgctctggtcactatggtcctcctgatggtcagtacctgtcaccc
accaaacaaaccagagaacagggggtctacccttccttgcctccttcagacccagtggcc
aaggtgctcgcagaggctcgctctaggatcagccaagaggcagcaggtgaaatggagtgt
gtcctggagcaggtggagccagatgcaagccgtgacggaatggacgctgaccaggtggtg
agagacatcgacaaactattgcaggactgcaggggaagtgaagccactggcacactcagg
aagtga
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