Maylandia zebra (zebra mbuna): 101487705
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Entry
101487705 CDS
T02814
Symbol
cop1
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD2
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze04115
p53 signaling pathway
mze04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101487705 (cop1)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
101487705 (cop1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mze04121
]
101487705 (cop1)
Enzymes [BR:
mze01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101487705 (cop1)
Ubiquitin system [BR:
mze04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101487705 (cop1)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
101487705 (cop1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_EIPR1
Beta-prop_RIG_2nd
zf-C3HC4_2
EIF3I
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
zf-C3HC4
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
zf-RING_2
Beta-prop_EML
zf-RING_UBOX
Beta-prop_DCAF4
zf-C3HC4_3
Beta-prop_WDR90_POC16_2nd
zf-RING_5
zf-C3HC4_4
RING_XB3-XBAT31
WD40_RFWD3
Beta-prop_WDR35_TULP_N
WD40_like
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_IFT122_1st
Beta-prop_NUP159_NUP214
zf-rbx1
WDR90_beta-prop_4th
zf-RING_10
UvrD-helicase
zf-RING_4
Sina_RING
zf_C2H2_10
Motif
Other DBs
NCBI-GeneID:
101487705
NCBI-ProteinID:
XP_004565139
UniProt:
A0A3P9CDI3
LinkDB
All DBs
Position
LG18:27262716..27279345
Genome browser
AA seq
715 aa
AA seq
DB search
MMSSNRPQQSAAGASSVPSTSSSSSSSTGGTGNTNGGGGSSAPTSNGSTSGNVVPSRTLA
AAGEGGLSVPTLAAVPSARGGLASLSRPSASSGNRKRSLHQAPLYNGLLNSYEDKSNDFV
CPICFEMIDEAHMTKCGHSFCFKCIRQSLEDSNRCPKCNYIIDNVDQVYPNFLVNELILK
QKQRSEEKRLKLDHPNGSRWQVFQDVLSPDQENLDLANVNLMLELLLQKKKQLEAESQAA
QRQILMEFLKEARRNKREQLEQLQKELNFLEEDIKRVEEMSGLYSPVMEAECTVPNVEAP
SPAPSCSSIIDQPDYNQPPGFGGAAQGKRQTWYNSTLASRRKRLTAHFEDLEQCYFSSKM
SRITDEGRNLNQLDDFMECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYF
AIAGVTKKIKVFEYGTVIQDAVDIHYPVNEMTCNSKISCISWSSYHKNLLASSDYEGTVI
LWDGFTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIEAKA
NVCCVKFSPTSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVNGEEIVSA
STDSQLKLWNVNKPHCLRSFKGHINEKNFVGLASNGDYVACGSENNSLYLYYKGLSKTLL
TFKFDTVKSVLDKDKKEDDTNEFVSAVCWRALPDGESNVLIAANSQGTIKVLELV
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcaagcaaccggccacagcaaagcgctgctggggcgagttcagtgcccagcaca
agtagcagcagcagcagtagtacaggaggcactgggaatacaaacggtggcggtggcagc
agcgctcccacaagtaatgggagcacttctggaaacgttgtgccctcacggacccttgca
gcggccggagagggcggcctgtcagtgccaactctggccgccgtgccgtcagcccggggc
ggcttagcttctctcagcagaccgtctgcgtcctctggtaacagaaagagatccctgcat
caggcaccactgtacaacggtctcttgaattcatacgaagataaaagcaacgacttcgtc
tgtcccatttgcttcgaaatgatagacgaggcacacatgacgaagtgcgggcacagtttt
tgtttcaagtgtatccgccagagtctggaggacagcaacagatgtcccaagtgtaactat
attatcgataatgtggatcaggtctacccaaactttcttgtaaatgaactgatccttaaa
caaaaacagaggtcagaagagaagaggctaaagttagatcatccaaatgggtctcggtgg
caggtcttccaggatgttttgagtcctgatcaggagaacttggacctggcaaatgtcaac
ctgatgctcgagctgctgcttcagaagaagaagcagctggaagcggaatcccaggcagct
cagagacagatcctcatggagttccttaaagaagccaggagaaacaagagagagcaacta
gagcaactgcagaaagagctcaacttcctcgaagaagacatcaaacgtgttgaggaaatg
agtgggctgtactctcctgtgatggaggctgagtgtactgtgcctaatgtggaagctccc
tctccagcacccagttgcagtagtattatagaccaacccgactacaaccagcctccagga
tttggtggagcagcccagggaaaacgtcagacctggtacaacagcaccctggcgtcaaga
agaaagaggctcacagctcattttgaggatctagagcagtgctacttctccagcaaaatg
tcccgcatcacagatgagggcaggaacctgaatcagctggatgatttcatggagtgtttg
tcaaagttcactcgctataactctgtgcggccgctggccaccctgtcatacgccagtgac
ctctataatggctccagtatcgtgtctagtattgagtttgaccgagactgtgactacttt
gccatcgctggcgtaaccaaaaagatcaaggtgtttgagtacggcactgtgatccaggat
gcagtggacatccactaccctgtcaacgaaatgacttgcaattccaaaatcagctgtatc
agctggagcagttatcacaaaaacctcctggccagcagtgactatgagggaactgttatt
ttgtgggatggattcacaggccagaggtccaaagtctaccaggaacatgaaaaaaggtgt
tggagtgtagacttcaatctcatggacccaaagcttttagcctcaggttctgatgatgct
aaagtcaagttgtggtcaactaatcttgacaattcagtggctagcattgaggctaaggct
aacgtctgctgtgttaaattcagcccaacctccagatatcatctggccttcggttgtgca
gaccactgtgttcactactatgatctccgcaacactaagcagccaatcatggtgttcaaa
ggccacaggaaggccgtctcctatgccaagttcgtcaacggagaggaaattgtttctgct
tcgacggacagtcagctgaagctgtggaatgtcaacaaacctcactgcctgcgctccttc
aagggtcacatcaacgagaagaactttgtgggcctggcctcaaacggagactacgttgcc
tgtggcagtgagaacaactccctgtatctgtactacaaaggactttccaagacactgtta
acattcaagtttgacacagtgaagagcgttctggacaaggataagaaggaggacgacacc
aacgagtttgtcagtgctgtctgctggagggccctgcctgatggagagtcaaatgtatta
attgctgccaacagtcaaggaacaattaaggtactcgagctcgtctga
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