Maylandia zebra (zebra mbuna): 101487742
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Entry
101487742 CDS
T02814
Symbol
tdp2
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 2 isoform X1
KO
K19619
tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
Organism
mze
Maylandia zebra (zebra mbuna)
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mze03400
]
101487742 (tdp2)
DNA repair and recombination proteins [BR:
mze03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
101487742 (tdp2)
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Gene cluster
GFIT
Motif
Pfam:
UBA_4
Exo_endo_phos
UBA_8
Exo_endo_phos2
TAP_C
Motif
Other DBs
NCBI-GeneID:
101487742
NCBI-ProteinID:
XP_004549280
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All DBs
Position
LG22:16170546..16173658
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AA seq
370 aa
AA seq
DB search
MASTSESDTPSVSNLEEKRSRLCDEFAAIAGTESAVAQCYLAENDWEMERALNSFFEADM
ERVFDVEELPEKDTTPKAKRQKVEDAPAANCQTVCGNICSIDLTADSPATTRKPSEEDDG
KLSMITWNVDGLDTDNIAERARGLCSYLVLYTPDVVFLQELIPPYVQYLKKRAVSYLMIE
GGEEGYFTGMLLKKSRVKFVEREIVAYPTTQMMRNLLVAQVIVNSQKLCLMTSHFESCKG
YAAERMKQLHVVMQRMSEAPDDVTVVFGGDTNLRDAEVTKVGLPATVCDVWERLGKQEHC
RYTWDTKANNNKTVPYVSRCRFDRIYFRSATKDGVPRLAPDHMALVGLEKLDCGRYTSDH
WGIYSTFTAE
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggcttctacctcggagtcggacacaccgtcagtttctaacttggaggaaaaaagaagc
cgcctctgtgacgagtttgcagccatagcgggaactgaaagcgccgtggctcagtgctac
ctggctgagaatgactgggagatggagagagccttgaactcattctttgaggcagacatg
gagagagtgtttgatgttgaggagcttccagagaaagacaccacccccaaagctaagagg
cagaaggttgaagatgcccctgctgcaaactgccaaactgtctgtggaaacatttgcagc
atagatttgactgcagacagtcctgctaccacacggaaaccttcagaagaagatgatggt
aaactgtccatgatcacctggaacgtggacggacttgatacggacaacattgcagagcgt
gccagaggcctgtgttcatatttagtcttatacactcctgacgtggtgttcctgcaggag
ctcattcccccgtatgtccagtacttgaagaaacgggctgtcagctacctgatgattgaa
ggtggtgaggaaggttacttcacagggatgttgctgaaaaagtcacgagtcaaatttgtg
gagcgtgagatagtagcttatcccaccactcagatgatgaggaacctgcttgttgctcag
gtgatcgtcaacagccagaagctgtgcctgatgacatcccactttgagagctgtaaggga
tatgctgcagagcggatgaaacagctgcatgtggtgatgcagaggatgtcagaggcacct
gatgatgtcaccgttgtgtttgggggagacacaaacctgagggatgcggaggtgaccaag
gtgggcctgcctgcaactgtctgtgatgtgtgggagcgactgggcaaacaggagcactgc
cgctacacatgggatactaaagccaacaacaacaaaactgttccgtatgtcagtcgctgc
cgctttgacagaatctacttccgctcggctaccaaggatggagtccctcgtctggcccct
gatcacatggccttggtggggctggagaagctggactgtggccgctacactagtgatcac
tggggaatctactccaccttcacagctgaatag
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