Maylandia zebra (zebra mbuna): 101487926
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Entry
101487926 CDS
T02814
Name
(RefSeq) ATP-dependent RNA helicase DDX3X isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
101487926
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mze03019
]
101487926
03041 Spliceosome [BR:
mze03041
]
101487926
03036 Chromosome and associated proteins [BR:
mze03036
]
101487926
Enzymes [BR:
mze01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101487926
Messenger RNA biogenesis [BR:
mze03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
101487926
mRNA cycle factors
Common to processing body (P body) and stress granule
101487926
Spliceosome [BR:
mze03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
101487926
Chromosome and associated proteins [BR:
mze03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
101487926
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
101487926
NCBI-ProteinID:
XP_004573898
UniProt:
A0A3P9BP84
LinkDB
All DBs
Position
LG23:38277488..38299456
Genome browser
AA seq
741 aa
AA seq
DB search
MSHVAVENAHGLEQQLAVLDLSAADGQGGGNSRRYIPPHLRNKDAPKNAGNAFAAGRQGG
YTIAPAANYGWDGTRNNFVNGYHDNRMTGNSFNRGPPRMERGRGGVGGGYRNNRGGAFNP
INPAQPMGFAGYENKDAGGWNTAKDAYSSFGNNRGKSAFFNDRGNASRGRFEHGGFGNGG
GGGGNSRWVEESRDDGDWSKPTPRNERLEHELFSGSNTGINFEKYDDIPVEATGQNCPQH
IESFQDVDMGEIIMGNIALSRYTRPTPVQKYAIPIIKSKRDLMACAQTGSGKTAAFLLPV
LSQIYTDGPGEALNAAKASGQENGKYGRRKQYPISLVLAPTRELALQIYDEARKFSYRSR
VRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDYCNYLVLDEADRMLD
MGFEPQIRRIVEQDTMPPKGIRQTMMFSATFPKEIQILARDFLEDYIFLAVGRVGSTSEN
ITQKVVWVEESDKRSFLLDLLSATAIPSEVQDSTGDNIEKPGKDSLTLVFVETKKGADAL
EDFLYREGYACTSIHGDRSQRDREEALNQFRSGKCPILVATAVAARGLDISNVKHVINFD
LPSDIEEYVHRIGRTGRVGNLGLATSFFNDKNGNITKDLLDILVEAKQEVPSWLESLAYE
HQHKSSNRGRSKRFSGGFGARDYRQTAAGVNAGGFGGRGGGRSQAGHGGNRAFGGGGFSN
FYTSDGYGGNYSHSQVDWWGN
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtggccgtcgaaaatgcccacggtctagaacagcagctcgctgtcctagac
ttgagcgctgcagacggacaaggtggtggcaatagcaggcgatatatacctccacattta
aggaacaaagatgctcccaaaaatgcaggaaatgcctttgctgctgggcgacagggtggt
tacaccatcgcgcctgcagccaactacggctgggacggcacgcgcaacaactttgtcaac
ggctaccacgacaatcgcatgacgggcaactcatttaaccgtggcccgcctcgcatggag
cggggaagaggtggcgttggaggtggttaccgcaacaacaggggtggagccttcaacccc
attaacccagcacagccaatgggctttgctgggtatgaaaataaagacgcaggtggctgg
aacactgccaaggacgcctatagcagttttggcaataaccgtggaaagtctgctttcttc
aatgacagaggcaacgctagccgaggaaggtttgagcatggaggatttggtaatggagga
ggaggaggaggaaacagccgctgggtggaggaatccagagatgacggagactggtccaaa
ccaacccctcgcaacgaacgccttgaacatgaattgttctctggcagtaacactgggatt
aactttgagaaatacgatgacattcctgttgaggccacgggacagaactgccctcagcac
atcgagagtttccaagacgtggacatgggtgagattatcatgggtaacattgctctgagt
cgctacaccagacccactcctgtccagaaatacgccattcctattattaaatcgaagaga
gacctcatggcctgcgcacagacaggctctgggaaaacggcagcattcctcttgccagtc
ctcagccagatctacactgatggaccaggagaggcccttaacgcagctaaagcatcagga
caggagaatggaaagtatggccgtcgcaagcagtaccccatctccctggtgctggctccc
accagagaactggcactgcagatatatgatgaagcaaggaagttttcctaccgctccaga
gtgcgtccctgtgttgtgtatggaggagcagacattggccagcagatcagagacctggag
agaggctgtcacctgctggtggccactccaggaagactcgtggacatgatggagagaggg
aagatcggactggactactgcaactacctggtcctagatgaggctgaccgtatgctggac
atgggctttgaaccacagatacggcgcatcgtcgaacaggacaccatgcctcctaaaggc
atccgacaaactatgatgttcagcgctacgtttcccaaagaaatccagatcttagctcgg
gatttcctggaggattacatcttcctggcggtgggcagagtgggttccacctcggagaac
atcacgcagaaagtggtgtgggtggaagagagtgataagcggtctttcctcttggacctg
ctaagcgctacagccatcccaagtgaggtacaggacagtactggagacaacatagagaaa
cctggtaaggactcattgaccctggtttttgtggagaccaagaaaggtgcagacgccttg
gaggacttcctatatcgggaaggctacgcctgcaccagtatccatggtgaccgttcccag
agagatcgagaggaggccctgaaccagttcagatcaggaaaatgtcccatcctggtggct
acagcggtagcagctcggggtttggacatctccaacgtgaaacatgttattaactttgac
ctgccaagcgacatagaggagtacgtccaccgtattggacgtacgggacgagtaggaaac
ctggggctggcaacatcattcttcaatgacaaaaacgggaacatcactaaagacctcctg
gacatcctagtagaggccaaacaggaagttccctcatggctcgagagcctggcctatgaa
caccagcacaagagtagtaatagagggcgctctaagaggttctctggcgggtttggagca
cgagattatcgtcagactgctgcaggagtcaacgccggagggtttggaggacgtggagga
ggacgcagccaggcaggacatggaggaaaccgtgcctttggaggaggcggcttcagcaac
ttctacaccagtgatggctacggaggaaactactcacactctcaagttgactggtggggc
aactag
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