Maylandia zebra (zebra mbuna): 105941231
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Entry
105941231 CDS
T02814
Name
(RefSeq) autophagy-related protein 16-2 isoform X2
KO
K20868
autophagy-related protein 16-2
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
105941231
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mze04131
]
105941231
03029 Mitochondrial biogenesis [BR:
mze03029
]
105941231
Membrane trafficking [BR:
mze04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
105941231
Others
Specific organelles associated proteins
Auto phagosome
105941231
Mitochondrial biogenesis [BR:
mze03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
105941231
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
WDR55
ATG16
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
Beta-prop_SCAP
NBCH_WD40
Beta-prop_NWD2_C
Beta-prop_HPS5
Beta-prop_DCAF4
Beta-prop_IFT122_1st
Beta-prop_DCAF12
PAP1
ALMT
Motif
Other DBs
NCBI-GeneID:
105941231
NCBI-ProteinID:
XP_012778390
LinkDB
All DBs
Position
LG14:36902507..36921160
Genome browser
AA seq
616 aa
AA seq
DB search
MAVVTANARGVSPRGSRPPAPGAGGRSEESWKGHIIRELKHRDLSQHAMFQNLIRFYTQL
LEKTSLTKGLLSSAARCPPAGGAPLSSLQQQSIQLKKTTGELAYQVVELTQQIKIKDGVL
EEQHARLLQEQRCLSRVSDAHQELQAQVEQVQGQNTVLKVEYDTLLEQQRAAEAKLRQET
VRGEELLAKVMKRKNQAAARMNSHNERRSRAREATQAAARSKVNLDRSAVHPPSSTSPSS
GFSNSSSAPSSRSTSPKNEKRDASTERKPMRLVRSASVTSPRILTSIKELFEKRRGHSVC
SQEEDLVSPVRICVSARVPARALQVLDAHEQDINAVRFSSSSDLLATGGTDKVIKLWEVR
AGLLTHRGTLDGSTEGITCIEFDPMGFRILAASYSKAAMLWQLGDSVPKVTLTGHSRKVT
AARFSSITHQVVTGSADGTIRLWDLRRAACLQSRNVAKYCSDLVCSENCIISGHYDGQIR
AWDSRVASCVQVFPAQGKVTSLDLSSDHCQLLSCCRDDCLQLFDLRRWSNERVTFRADGF
KCGSDSTKAVISPDCCYLAAGSADGAVYIWNVSTGKLETRLPDKHSSSISAVSWSLSGEY
FVSVDKSKRAVLWSDM
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggccgttgtgacagccaacgcccgcggagtgtccccgcgggggagccggcctccggca
ccgggagccggcgggagatccgaggagtcctggaagggacacatcatccgagagctgaag
caccgagacctgagccagcacgccatgttccagaacctgatccgcttctacactcagctg
ctggagaaaaccagtctgaccaaaggactgctgagcagcgccgccaggtgcccccccgca
ggcggcgccccgctctcgtccctgcagcagcagagcatccagctgaagaagaccacggga
gagttagcctatcaggtggtggagctgacgcagcagataaaaatcaaagacggcgttctg
gaggagcagcatgccaggctgctgcaggagcagcgttgcctgtcgcgagtgtctgatgct
catcaggagctgcaggcacaggtggagcaggttcaagggcagaacacggtgctgaaggtg
gagtacgacactctcctggagcagcagagagcagcggaggcgaaactaaggcaggagacg
gtcagaggggaagaactgctggccaaggtgatgaagcggaaaaaccaggccgcagctcgg
atgaacagccacaacgaacgccgctccagagcccgagaggcaacccaggccgcagccagg
tcgaaggtcaacttggacaggtcagctgtccatcccccgagctctacatcgccctcttca
ggtttctctaactcatcaagtgctccgagctccagatcgacgtctccaaagaacgagaaa
cgggacgcgtccacggaacgaaaacccatgcgactcgtgaggtcggcgtcggtgacgtct
ccgaggatcctgacctccatcaaagagctgtttgagaagaggcggggccactcggtctgc
agtcaggaggaagatctcgtctctcctgtaagaatctgtgtgtcagcccgagtcccggcc
agagctctgcaagtcctggatgcccatgagcaagacatcaacgccgtgcggttcagctcc
agctcagacctgctggccacgggggggacagacaaagtgatcaaactgtgggaggtcagg
gcaggcttgctgactcacagagggaccctggacggcagcacggagggcatcacctgcatc
gagtttgaccccatgggcttcaggatcctcgccgcgtcctacagcaaggcggccatgctg
tggcagctgggcgactccgttccaaaggtgactcttacaggtcacagcaggaaggtgacg
gcggcgaggttcagcagcatcacccatcaggtggtgacaggaagtgccgatggtaccatc
agactgtgggacctgcggcgagctgcctgtctgcagtcgcgtaatgtggcgaagtactgc
agcgacctggtgtgctctgagaactgcatcatcagcggacactacgacgggcagatcaga
gcgtgggactccagggtggcgagctgcgttcaggtgtttcctgctcagggaaaagtcacc
tcgttggacctcagttctgaccactgccagctgctcagctgttgccgtgacgactgtctc
caactgttcgacctgaggaggtggagcaacgagcgcgtgaccttcagagccgacgggttc
aaatgtggcagcgacagcaccaaagccgtcatcagtccagactgctgctatttggcggcc
ggctctgcagacggcgcagtttacatctggaatgtctcgacgggcaagttggagacccgg
ctacccgacaaacacagctcgtccatcagtgccgtgtcctggtctctgtccggcgaatac
ttcgtcagcgtggacaagagcaagcgagctgtcctctggagtgacatgtga
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