Maylandia zebra (zebra mbuna): 112434138
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Entry
112434138 CDS
T02814
Name
(RefSeq) LOW QUALITY PROTEIN: HBS1-like protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112434138
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mze03019
]
112434138
Messenger RNA biogenesis [BR:
mze03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
112434138
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
GTP_EFTU_D4
Motif
Other DBs
NCBI-GeneID:
112434138
NCBI-ProteinID:
XP_024657696
LinkDB
All DBs
Position
Unknown
AA seq
687 aa
AA seq
DB search
MSRHRNVRGYNYDEDFEDDDMYGQSVEDDYCCISPATANQFIYSRQERHTKEEPLEEEEF
EDEAVPVSPTVNQNLNPLDQAKLYSCLDHMRTVLGDAVPDSVLTQAAIKCGFDPQRALDA
VLSEDTKTAPVTRSTAEETGTVERANQDKAPQPQRTKQEAVADKAKSRDASHNKLDSEVL
PKVARMTVSGKRQTMGFDVPSTGENGVVVTATEAASKRPETPSKGSNGDEPMTGPTLSRS
SGKARQAINIKAELEKRQGGKPLLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRTMHKYEQ
ESKKAGKASFAYAWVLDETGEERDRGVTMDVGMTKFETNSKVVTLMDAPGHKDFIPNMIT
GAAQADVAVLVVDASRGEFEAGFEAGGQTREHALLVRSLGVTQLAVAVNKMDQVNWQQER
FQEIISKLGHFLKQAGFKESDVFYIPTSGLSGENLATRSSVSQLTSWYSGPSLLEQIDAF
KAPQRSVDKPFRLCVSDVFKDQGSGFCVTGKIEAGYIQTGDKILAMPPNETCTVKGITLH
DEALDWAAAGDHVSLTLTGMDIIKINMGCVFCDPKEPIRVCTRFRARVLIFNIEIPITQG
FPVLLHYQTVSEPATIRKLISVLHKSSGEVLKKKPKCLSKGMNAIVEIQTQRPVSLELYK
DYKELGRFMLRYVGSTIAAGVVTEIKE
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgtcatagaaatgttcgaggttacaactacgatgaagactttgaagatgatgac
atgtatggacagtctgtggaggatgactactgttgcatttcaccagcaacagcaaatcag
ttcatctactcgcgtcaagaaagacataccaaggaagagcctttagaggaggaagaattt
gaagatgaggctgtccctgtgtcccctactgtcaaccagaatctcaaccctcttgatcaa
gccaagctgtattcctgtctggaccacatgcggactgtgctgggagatgcagtgccggac
tcagtcctgacccaggcagccataaaatgtggatttgacccacagagggcactggacgca
gtactgtctgaagacactaaaactgctccagttaccagaagtacagctgaagagactggt
acagtagagcgagctaaccaggacaaagcgccgcaaccacaaagaaccaaacaagaggct
gtggctgacaaagctaaaagcagagatgcttctcacaataaactggactctgaagtttta
ccaaaagtggcccgcatgactgtctctggaaagaggcagactatgggttttgatgttcca
agtacaggggagaacggtgttgtcgtcacagctacagaagctgcctccaaacgccctgag
actccatctaaagggtccaatggggacgagcccatgaccggtcccaccctgagccgttca
tctgggaaggcacggcaggccatcaatatcaaagctgagctggagaagagacaagggggc
aagcctctgttaaatttggtagttataggtcacgtggatgcgggtaagagcacactgatg
ggccacctgctatatctgctcggcaatgtcaacaaacgcaccatgcataagtacgagcag
gagtcgaaaaaggcaggaaaagcctccttcgcctatgcttgggttctggatgaaacgggc
gaggagagagacagaggtgttacaatggatgtgggcatgacaaagtttgagacaaactct
aaagtggtgacactgatggatgcaccaggacacaaagacttcatccccaacatgatcaca
ggagctgcacaggctgatgtggcggtgctcgtggtggatgccagcagaggagagtttgag
gcgggcttcgaggctggtggtcagaccagagagcatgccttgctggtgcgttcgctgggt
gtcactcagctggctgtagctgtcaacaagatggaccaggtaaactggcaacaggagcgc
ttccaagaaatcatctcgaaacttggccattttctcaagcaggcaggattcaaggagtct
gatgttttctacatccccaccagcggcctgtcaggagaaaaccttgccaccaggagctca
gtgtcacagctcacctcttggtactctgggccgagcctgctggagcagattgatgctttc
aaggcccctcagaggtctgtagacaaacctttcagattgtgcgtctccgatgtctttaaa
gaccagggttcaggcttctgtgttacaggaaagatcgaggctggttatattcaaactgga
gacaaaatactggcaatgcctccaaatgaaacctgcactgtcaaaggaattactctacac
gatgaggctctggactgggctgcagcaggagaccacgtcagcctgacactcactggcatg
gacatcattaagatcaatatgggctgtgtgttctgtgatcccaaagaacctattcgagtt
tgcactcgattcagagctcgagtcctcattttcaatatcgagatccccatcacacaaggc
tttccagtactgttgcactaccagacagtcagcgaaccggccaccataaggaagttaatt
agtgttctacacaagagcagcggcgaggtcctgaagaagaaaccaaagtgtttgagtaag
ggcatgaatgccatcgtggagatccagacccagaggcccgtgtcattagagctgtacaaa
gactataaggagctgggccgcttcatgctgcgatatgttggctccaccatcgccgcgggg
gttgtcactgagatcaaagaatga
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